Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:47:29 (4044616): wrapper (7.7.26015): starting
18:47:29 (4044616): wrapper: running run_atlas (--nthreads 4)
[2025-10-07 18:47:29] Arguments: --nthreads 4
[2025-10-07 18:47:29] Threads: 4
[2025-10-07 18:47:29] Checking for CVMFS
[2025-10-07 18:47:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 18:47:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 18:47:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 18:47:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 18:47:30] 2.13.2.0 922105 2703 50844 151429 1 187 2823798 6144000 2675 130560 0 6486435 99.997 85127 132 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-10-07 18:47:30] CVMFS is ok
[2025-10-07 18:47:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 18:47:30] Checking for apptainer binary...
[2025-10-07 18:47:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 18:47:30] Running /usr/bin/apptainer --version
[2025-10-07 18:47:30] apptainer version 1.4.0
[2025-10-07 18:47:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 18:47:30] Zen
[2025-10-07 18:47:30] apptainer works
[2025-10-07 18:47:30] Set ATHENA_PROC_NUMBER=4
[2025-10-07 18:47:30] Set ATHENA_CORE_NUMBER=4
[2025-10-07 18:47:30] Starting ATLAS job with PandaID=6832973374
[2025-10-07 18:47:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 20:15:04]  *** The last 200 lines of the pilot log: ***
[2025-10-07 20:15:04] 2025-10-07 09:14:39,439 | INFO     | adding to output.list: log.46376905._119319.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f2/4c/log.46376905._119319.job.log.tg
[2025-10-07 20:15:04] 2025-10-07 09:14:39,440 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 20:15:04] 2025-10-07 09:14:39,440 | INFO     | summary of transferred files:
[2025-10-07 20:15:04] 2025-10-07 09:14:39,440 | INFO     |  -- lfn=log.46376905._119319.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 20:15:04] 2025-10-07 09:14:39,440 | INFO     | stage-out finished correctly
[2025-10-07 20:15:04] 2025-10-07 09:14:39,544 | INFO     | PID=4048426 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 20:15:04] 2025-10-07 09:14:39,544 | INFO     | .. there are 4 such processes running
[2025-10-07 20:15:04] 2025-10-07 09:14:40,135 | WARNING  | process 4055009 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 20:15:04] 2025-10-07 09:14:40,136 | INFO     | using path: /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6832973374/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 20:15:04] 2025-10-07 09:14:40,136 | INFO     | using path: /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6832973374/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 20:15:04] 2025-10-07 09:14:40,137 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2278666 B
[2025-10-07 20:15:04] 2025-10-07 09:14:40,137 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15661 B
[2025-10-07 20:15:04] 2025-10-07 09:14:40,137 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/4
[2025-10-07 20:15:04] 2025-10-07 09:14:40,149 | INFO     | sufficient remaining disk space (207119974400 B)
[2025-10-07 20:15:04] 2025-10-07 09:14:40,149 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-07 20:15:04] 2025-10-07 09:14:40,150 | INFO     | size of work directory /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6832973374: 2580651 B (within 2537553920 B limit)
[2025-10-07 20:15:04] 2025-10-07 09:14:40,150 | INFO     | pfn file=/home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6832973374/HITS.46376905._119319.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-07 20:15:04] 2025-10-07 09:14:40,150 | INFO     | total size of present files: 0 B (workdir size: 2580651 B)
[2025-10-07 20:15:04] 2025-10-07 09:14:40,150 | INFO     | output file size check: skipping output file /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6832973374/HITS.46376905._119319.pool.root.1 since it does not exist
[2025-10-07 20:15:04] 2025-10-07 09:14:40,274 | INFO     | number of running child processes to parent process 4055009: 1
[2025-10-07 20:15:04] 2025-10-07 09:14:40,274 | INFO     | maximum number of monitored processes: 6
[2025-10-07 20:15:04] 2025-10-07 09:14:40,545 | INFO     | time since job start (5220s) is within the limit (172800.0s)
[2025-10-07 20:15:04] 2025-10-07 09:14:41,230 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 20:15:04] 2025-10-07 09:14:41,987 | INFO     | job 6832973374 has state=finished
[2025-10-07 20:15:04] 2025-10-07 09:14:41,987 | INFO     | preparing for final server update for job 6832973374 in state='finished'
[2025-10-07 20:15:04] 2025-10-07 09:14:41,987 | INFO     | this job has now completed (state=finished)
[2025-10-07 20:15:04] 2025-10-07 09:14:41,987 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 20:15:04] 2025-10-07 09:14:41,987 | INFO     | log transfer has been attempted: DONE
[2025-10-07 20:15:04] 2025-10-07 09:14:41,988 | INFO     | job 6832973374 has finished - writing final server update
[2025-10-07 20:15:04] 2025-10-07 09:14:41,988 | INFO     | total number of processed events: 400 (read)
[2025-10-07 20:15:04] 2025-10-07 09:14:41,991 | INFO     | executing command: lscpu
[2025-10-07 20:15:04] 2025-10-07 09:14:42,014 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 20:15:04] 2025-10-07 09:14:42,550 | INFO     | time since job start (5222s) is within the limit (172800.0s)
[2025-10-07 20:15:04] 2025-10-07 09:14:42,783 | INFO     | monitor loop #395: job 0:6832973374 is in state 'finished'
[2025-10-07 20:15:04] 2025-10-07 09:14:42,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 20:15:04] 2025-10-07 09:14:44,555 | INFO     | time since job start (5224s) is within the limit (172800.0s)
[2025-10-07 20:15:04] 2025-10-07 09:14:44,681 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 20:15:04] 2025-10-07 09:14:44,683 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4355.692
[2025-10-07 20:15:04] 2025-10-07 09:14:44,686 | INFO     | using path: /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6832973374/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 20:15:04] 2025-10-07 09:14:44,686 | INFO     | extracted standard info from prmon json
[2025-10-07 20:15:04] 2025-10-07 09:14:44,687 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 20:15:04] 2025-10-07 09:14:44,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 20:15:04] 2025-10-07 09:14:44,687 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 20:15:04] 2025-10-07 09:14:44,687 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 20:15:04] 2025-10-07 09:14:44,688 | INFO     | fitting pss+swap vs Time
[2025-10-07 20:15:04] 2025-10-07 09:14:44,688 | INFO     | sum of square deviations: 152858680.0
[2025-10-07 20:15:04] 2025-10-07 09:14:44,688 | INFO     | sum of deviations: -6786479482.0
[2025-10-07 20:15:04] 2025-10-07 09:14:44,688 | INFO     | mean x: 1759825965.0
[2025-10-07 20:15:04] 2025-10-07 09:14:44,688 | INFO     | mean y: 2369660.417721519
[2025-10-07 20:15:04] 2025-10-07 09:14:44,688 | INFO     | -- intersect: 78133508849.65677
[2025-10-07 20:15:04] 2025-10-07 09:14:44,688 | INFO     | intersect: 78133508849.65677
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | chi2: 0.03516769356375333
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | -- intersect: 78133508849.65677
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | current memory leak: -44.40 B/s (using 79 data points, chi2=0.04)
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | could have reported an average CPU frequency of 4293 MHz (6 samples)
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | ..............................
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | . Timing measurements:
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | . get job = 0 s
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | . initial setup = 4 s
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | . payload setup = 3 s
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | . stage-in = 0 s
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | . payload execution = 5197 s
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | . stage-out = 0 s
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | . log creation = 0 s
[2025-10-07 20:15:04] 2025-10-07 09:14:44,689 | INFO     | ..............................
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | 
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | job summary report
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | --------------------------------------------------
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | PanDA job id: 6832973374
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | task id: 46376905
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | errors: (none)
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | pilot state: finished 
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | transexitcode: 0
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | exeerrorcode: 0
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | exeerrordiag: 
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | exitcode: 0
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | exitmsg: OK
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | cpuconsumptiontime: 19464 s
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | nevents: 400
[2025-10-07 20:15:04] 2025-10-07 09:14:44,732 | INFO     | neventsw: 0
[2025-10-07 20:15:04] 2025-10-07 09:14:44,733 | INFO     | pid: 4055009
[2025-10-07 20:15:04] 2025-10-07 09:14:44,733 | INFO     | pgrp: 4055009
[2025-10-07 20:15:04] 2025-10-07 09:14:44,733 | INFO     | corecount: 4
[2025-10-07 20:15:04] 2025-10-07 09:14:44,733 | INFO     | event service: False
[2025-10-07 20:15:04] 2025-10-07 09:14:44,733 | INFO     | sizes: {0: 2348831, 3: 2349093, 11: 2349121, 5205: 2384602, 5207: 2384726, 5211: 2384920}
[2025-10-07 20:15:04] 2025-10-07 09:14:44,733 | INFO     | --------------------------------------------------
[2025-10-07 20:15:04] 2025-10-07 09:14:44,733 | INFO     | 
[2025-10-07 20:15:04] 2025-10-07 09:14:44,733 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/4
[2025-10-07 20:15:04] 2025-10-07 09:14:44,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,749 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,749 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,749 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | job 6832973374 has completed (purged errors)
[2025-10-07 20:15:04] 2025-10-07 09:14:44,750 | INFO     | overall cleanup function is called
[2025-10-07 20:15:04] 2025-10-07 09:14:45,757 | INFO     | --- collectZombieJob: --- 10, [4055009]
[2025-10-07 20:15:04] 2025-10-07 09:14:45,757 | INFO     | zombie collector waiting for pid 4055009
[2025-10-07 20:15:04] 2025-10-07 09:14:45,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 20:15:04] 2025-10-07 09:14:45,757 | INFO     | collected zombie processes
[2025-10-07 20:15:04] 2025-10-07 09:14:45,757 | INFO     | will attempt to kill all subprocesses of pid=4055009
[2025-10-07 20:15:04] 2025-10-07 09:14:45,890 | INFO     | process IDs to be killed: [4055009] (in reverse order)
[2025-10-07 20:15:04] 2025-10-07 09:14:45,941 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 20:15:04] 2025-10-07 09:14:45,942 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 20:15:04] 2025-10-07 09:14:45,947 | INFO     | did not find any defunct processes belonging to 4055009
[2025-10-07 20:15:04] 2025-10-07 09:14:45,950 | INFO     | did not find any defunct processes belonging to 4055009
[2025-10-07 20:15:04] 2025-10-07 09:14:45,950 | INFO     | ready for new job
[2025-10-07 20:15:04] 2025-10-07 09:14:45,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 20:15:04] 2025-10-07 09:14:45,952 | INFO     | ***************************************
[2025-10-07 20:15:04] 2025-10-07 09:14:45,952 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 20:15:04] 2025-10-07 09:14:45,952 | INFO     | ***************************************
[2025-10-07 20:15:04] 2025-10-07 09:14:45,952 | INFO     | 
[2025-10-07 20:15:04] 2025-10-07 09:14:45,953 | INFO     | architecture information:
[2025-10-07 20:15:04] 2025-10-07 09:14:45,953 | INFO     | executing command: cat /etc/os-release
[2025-10-07 20:15:04] 2025-10-07 09:14:45,967 | INFO     | cat /etc/os-release:
[2025-10-07 20:15:04] NAME="CentOS Linux"
[2025-10-07 20:15:04] VERSION="7 (Core)"
[2025-10-07 20:15:04] ID="centos"
[2025-10-07 20:15:04] ID_LIKE="rhel fedora"
[2025-10-07 20:15:04] VERSION_ID="7"
[2025-10-07 20:15:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 20:15:04] ANSI_COLOR="0;31"
[2025-10-07 20:15:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 20:15:04] HOME_URL="https://www.centos.org/"
[2025-10-07 20:15:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 20:15:04] 
[2025-10-07 20:15:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 20:15:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 20:15:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 20:15:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 20:15:04] 
[2025-10-07 20:15:04] 2025-10-07 09:14:45,967 | INFO     | ***************************************
[2025-10-07 20:15:04] 2025-10-07 09:14:46,469 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/4
[2025-10-07 20:15:04] 2025-10-07 09:14:46,486 | INFO     | sufficient remaining disk space (207123120128 B)
[2025-10-07 20:15:04] 2025-10-07 09:14:46,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 20:15:04] 2025-10-07 09:14:46,487 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 20:15:04] 2025-10-07 09:14:46,487 | INFO     | update_server=False
[2025-10-07 20:15:04] 2025-10-07 09:14:46,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 20:15:04] 2025-10-07 09:14:46,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 20:15:04] 2025-10-07 09:14:46,487 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-07 20:15:04] 2025-10-07 09:14:46,487 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 20:15:04] 2025-10-07 09:14:46,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 20:15:04] 2025-10-07 09:14:46,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 20:15:04] 2025-10-07 09:14:46,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 20:15:04] 2025-10-07 09:14:46,488 | INFO     | aborting loop
[2025-10-07 20:15:04] 2025-10-07 09:14:47,034 | INFO     | all payload control threads have been joined
[2025-10-07 20:15:04] 2025-10-07 09:14:47,170 | INFO     | all job control threads have been joined
[2025-10-07 20:15:04] 2025-10-07 09:14:47,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 20:15:04] 2025-10-07 09:14:47,487 | INFO     | all data control threads have been joined
[2025-10-07 20:15:04] 2025-10-07 09:14:47,492 | INFO     | [job] retrieve thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:47,492 | INFO     | [job] queue monitor thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:47,492 | INFO     | [job] job monitor thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:47,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 20:15:04] 2025-10-07 09:14:47,689 | INFO     | [payload] validate_post thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:47,985 | INFO     | [data] copytool_in thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:48,039 | INFO     | [payload] control thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:48,040 | INFO     | [job] validate thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:48,175 | INFO     | [job] control thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:48,233 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:48,321 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:48,492 | INFO     | [data] control thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:48,539 | INFO     | [monitor] cgroup control has ended
[2025-10-07 20:15:04] 2025-10-07 09:14:48,639 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:48,734 | INFO     | [payload] failed_post thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:49,518 | INFO     | [data] copytool_out thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:51,300 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:57,141 | INFO     | job.realtimelogging is not enabled
[2025-10-07 20:15:04] 2025-10-07 09:14:58,146 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 20:15:04] 2025-10-07 09:14:58,906 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128439011108672)>', '<ExcThread(monitor, started 128438729934592)>']
[2025-10-07 20:15:04] 2025-10-07 09:14:59,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 20:15:04] 2025-10-07 09:14:59,548 | INFO     | [monitor] control thread has ended
[2025-10-07 20:15:04] 2025-10-07 09:15:03,931 | INFO     | all workflow threads have been joined
[2025-10-07 20:15:04] 2025-10-07 09:15:03,931 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 20:15:04] 2025-10-07 09:15:03,931 | INFO     | traces error code: 0
[2025-10-07 20:15:04] 2025-10-07 09:15:03,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 20:15:04] 2025-10-07 09:15:04,027 [wrapper] ==== pilot stdout END ====
[2025-10-07 20:15:04] 2025-10-07 09:15:04,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 20:15:04] 2025-10-07 09:15:04,032 [wrapper] pilotpid: 4048426
[2025-10-07 20:15:04] 2025-10-07 09:15:04,034 [wrapper] Pilot exit status: 0
[2025-10-07 20:15:04] 2025-10-07 09:15:04,042 [wrapper] pandaids: 6832973374
[2025-10-07 20:15:04] 2025-10-07 09:15:04,076 [wrapper] cleanup supervisor_pilot 4135627 4048427
[2025-10-07 20:15:04] 2025-10-07 09:15:04,079 [wrapper] Test setup, not cleaning
[2025-10-07 20:15:04] 2025-10-07 09:15:04,081 [wrapper] apfmon messages muted
[2025-10-07 20:15:04] 2025-10-07 09:15:04,083 [wrapper] ==== wrapper stdout END ====
[2025-10-07 20:15:04] 2025-10-07 09:15:04,085 [wrapper] ==== wrapper stderr END ====
[2025-10-07 20:15:04]  *** Error codes and diagnostics ***
[2025-10-07 20:15:04]     "exeErrorCode": 0,
[2025-10-07 20:15:04]     "exeErrorDiag": "",
[2025-10-07 20:15:04]     "pilotErrorCode": 0,
[2025-10-07 20:15:04]     "pilotErrorDiag": "",
[2025-10-07 20:15:04]  *** Listing of results directory ***
[2025-10-07 20:15:04] total 390360
[2025-10-07 20:15:04] -rw-r--r-- 1 michael michael    552446 Oct  7 07:44 pilot3.tar.gz
[2025-10-07 20:15:04] -rw-r--r-- 1 michael michael      5112 Oct  7 07:55 queuedata.json
[2025-10-07 20:15:04] -rwx------ 1 michael michael     36292 Oct  7 07:56 runpilot2-wrapper.sh
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael       100 Oct  7 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 20:15:04] -rwxr-xr-x 1 michael michael      7986 Oct  7 18:47 run_atlas
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael       105 Oct  7 18:47 job.xml
[2025-10-07 20:15:04] -rw-r--r-- 2 michael michael 216881438 Oct  7 18:47 EVNT.46376901._004427.pool.root.1
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael      9813 Oct  7 18:47 init_data.xml
[2025-10-07 20:15:04] drwxrwx--x 2 michael michael      4096 Oct  7 18:47 shared
[2025-10-07 20:15:04] -rw-r--r-- 2 michael michael    565603 Oct  7 18:47 input.tar.gz
[2025-10-07 20:15:04] -rw-r--r-- 2 michael michael     15120 Oct  7 18:47 start_atlas.sh
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael         0 Oct  7 18:47 boinc_lockfile
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael      2521 Oct  7 18:47 pandaJob.out
[2025-10-07 20:15:04] -rw------- 1 michael michael    974976 Oct  7 18:47 agis_schedconf.cvmfs.json
[2025-10-07 20:15:04] -rw------- 1 michael michael   1560401 Oct  7 18:47 agis_ddmendpoints.agis.ALL.json
[2025-10-07 20:15:04] drwx------ 4 michael michael      4096 Oct  7 18:47 pilot3
[2025-10-07 20:15:04] -rw------- 1 michael michael 176859193 Oct  7 20:14 HITS.46376905._119319.pool.root.1
[2025-10-07 20:15:04] -rw------- 1 michael michael        95 Oct  7 20:14 pilot_heartbeat.json
[2025-10-07 20:15:04] -rw------- 1 michael michael      1023 Oct  7 20:14 memory_monitor_summary.json
[2025-10-07 20:15:04] -rw------- 1 michael michael    269898 Oct  7 20:14 log.46376905._119319.job.log.tgz.1
[2025-10-07 20:15:04] -rw------- 1 michael michael      7733 Oct  7 20:14 heartbeat.json
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael      8192 Oct  7 20:14 boinc_mmap_file
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael        27 Oct  7 20:14 wrapper_checkpoint.txt
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael       529 Oct  7 20:14 boinc_task_state.xml
[2025-10-07 20:15:04] -rw------- 1 michael michael      4636 Oct  7 20:15 pilotlog.txt
[2025-10-07 20:15:04] -rw------- 1 michael michael    780727 Oct  7 20:15 log.46376905._119319.job.log.1
[2025-10-07 20:15:04] -rw------- 1 michael michael       357 Oct  7 20:15 output.list
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael       620 Oct  7 20:15 runtime_log
[2025-10-07 20:15:04] -rw------- 1 michael michael   1064960 Oct  7 20:15 result.tar.gz
[2025-10-07 20:15:04] -rw------- 1 michael michael       641 Oct  7 20:15 6O0MDm2Q7P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmS2JMDmBwEEun.diag
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael      8797 Oct  7 20:15 runtime_log.err
[2025-10-07 20:15:04] -rw-rw-r-- 1 michael michael     22285 Oct  7 20:15 stderr.txt
[2025-10-07 20:15:04] HITS file was successfully produced:
[2025-10-07 20:15:04] -rw------- 1 michael michael 176859193 Oct  7 20:14 shared/HITS.pool.root.1
[2025-10-07 20:15:04]  *** Contents of shared directory: ***
[2025-10-07 20:15:04] total 386136
[2025-10-07 20:15:04] -rw-r--r-- 2 michael michael 216881438 Oct  7 18:47 ATLAS.root_0
[2025-10-07 20:15:04] -rw-r--r-- 2 michael michael    565603 Oct  7 18:47 input.tar.gz
[2025-10-07 20:15:04] -rw-r--r-- 2 michael michael     15120 Oct  7 18:47 start_atlas.sh
[2025-10-07 20:15:04] -rw------- 1 michael michael 176859193 Oct  7 20:14 HITS.pool.root.1
[2025-10-07 20:15:04] -rw------- 1 michael michael   1064960 Oct  7 20:15 result.tar.gz
20:15:05 (4044616): run_atlas exited; CPU time 19509.905133
20:15:05 (4044616): called boinc_finish(0)

</stderr_txt>
]]>

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