Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
09:07:01 (969792): wrapper (7.7.26015): starting
09:07:01 (969792): wrapper: running run_atlas (--nthreads 2)
[2025-10-07 09:07:01] Arguments: --nthreads 2
[2025-10-07 09:07:01] Threads: 2
[2025-10-07 09:07:01] Checking for CVMFS
[2025-10-07 09:07:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 09:07:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 09:07:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 09:07:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 09:07:01] 2.11.0.0 3910605 9557 63036 151428 3 9 4967640 6144000 0 130560 0 20922375 99.997 314402 496 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 09:07:01] CVMFS is ok
[2025-10-07 09:07:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 09:07:01] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 09:07:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 09:07:01] Further information can be found at the LHC@home message board.
[2025-10-07 09:07:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 09:07:01] Checking for apptainer binary...
[2025-10-07 09:07:01] apptainer is not installed, using version from CVMFS
[2025-10-07 09:07:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 09:07:02] mordor
[2025-10-07 09:07:02] apptainer works
[2025-10-07 09:07:02] Set ATHENA_PROC_NUMBER=2
[2025-10-07 09:07:02] Set ATHENA_CORE_NUMBER=2
[2025-10-07 09:07:02] Starting ATLAS job with PandaID=6833155170
[2025-10-07 09:07:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 13:58:45]  *** The last 200 lines of the pilot log: ***
[2025-10-07 13:58:45] 2025-10-07 11:58:12,559 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 13:58:45] 2025-10-07 11:58:12,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 13:58:45] 2025-10-07 11:58:12,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 13:58:45] 2025-10-07 11:58:12,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 13:58:45] 2025-10-07 11:58:12,563 | INFO     | fitting pss+swap vs Time
[2025-10-07 13:58:45] 2025-10-07 11:58:12,563 | INFO     | sum of square deviations: 7253894147.5
[2025-10-07 13:58:45] 2025-10-07 11:58:12,564 | INFO     | sum of deviations: -9524124986.499996
[2025-10-07 13:58:45] 2025-10-07 11:58:12,565 | INFO     | mean x: 1759829543.5
[2025-10-07 13:58:45] 2025-10-07 11:58:12,565 | INFO     | mean y: 2250868.9755244753
[2025-10-07 13:58:45] 2025-10-07 11:58:12,565 | INFO     | -- intersect: 2312849312.572296
[2025-10-07 13:58:45] 2025-10-07 11:58:12,565 | INFO     | intersect: 2312849312.572296
[2025-10-07 13:58:45] 2025-10-07 11:58:12,565 | INFO     | chi2: 1.8362577094895607
[2025-10-07 13:58:45] 2025-10-07 11:58:12,565 | INFO     | sum of square deviations: 6880054580.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,567 | INFO     | sum of deviations: 6373025691.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,567 | INFO     | mean x: 1759829391.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,567 | INFO     | mean y: 2257263.206405694
[2025-10-07 13:58:45] 2025-10-07 11:58:12,567 | INFO     | -- intersect: -1627880665.2371626
[2025-10-07 13:58:45] 2025-10-07 11:58:12,567 | INFO     | intersect: -1627880665.2371626
[2025-10-07 13:58:45] 2025-10-07 11:58:12,567 | INFO     | chi2: 1.1829428834656042
[2025-10-07 13:58:45] 2025-10-07 11:58:12,568 | INFO     | current chi2=1.1829428834656042 (change=35.57860221077377 %)
[2025-10-07 13:58:45] 2025-10-07 11:58:12,568 | INFO     | sum of square deviations: 6519285025.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,569 | INFO     | sum of deviations: 6320729628.499998
[2025-10-07 13:58:45] 2025-10-07 11:58:12,569 | INFO     | mean x: 1759829238.5
[2025-10-07 13:58:45] 2025-10-07 11:58:12,569 | INFO     | mean y: 2257241.097826087
[2025-10-07 13:58:45] 2025-10-07 11:58:12,570 | INFO     | -- intersect: -1703973544.36895
[2025-10-07 13:58:45] 2025-10-07 11:58:12,570 | INFO     | intersect: -1703973544.36895
[2025-10-07 13:58:45] 2025-10-07 11:58:12,570 | INFO     | chi2: 1.183149475206146
[2025-10-07 13:58:45] 2025-10-07 11:58:12,570 | INFO     | current chi2=1.183149475206146 (change=-0.01746421939972178 %)
[2025-10-07 13:58:45] 2025-10-07 11:58:12,570 | INFO     | right removable region: 275
[2025-10-07 13:58:45] 2025-10-07 11:58:12,570 | INFO     | sum of square deviations: 6880054580.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,572 | INFO     | sum of deviations: -25865029253.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,572 | INFO     | mean x: 1759829696.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,572 | INFO     | mean y: 2257386.3985765125
[2025-10-07 13:58:45] 2025-10-07 11:58:12,572 | INFO     | -- intersect: 6618200041.803804
[2025-10-07 13:58:45] 2025-10-07 11:58:12,572 | INFO     | intersect: 6618200041.803804
[2025-10-07 13:58:45] 2025-10-07 11:58:12,572 | INFO     | chi2: 0.753509141545505
[2025-10-07 13:58:45] 2025-10-07 11:58:12,572 | INFO     | current chi2=0.753509141545505 (change=58.964956952858 %)
[2025-10-07 13:58:45] 2025-10-07 11:58:12,573 | INFO     | sum of square deviations: 6519285025.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,574 | INFO     | sum of deviations: -16149077170.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,574 | INFO     | mean x: 1759829848.5
[2025-10-07 13:58:45] 2025-10-07 11:58:12,574 | INFO     | mean y: 2253311.5942028984
[2025-10-07 13:58:45] 2025-10-07 11:58:12,574 | INFO     | -- intersect: 4361570003.610734
[2025-10-07 13:58:45] 2025-10-07 11:58:12,575 | INFO     | intersect: 4361570003.610734
[2025-10-07 13:58:45] 2025-10-07 11:58:12,575 | INFO     | chi2: 0.6694340638889353
[2025-10-07 13:58:45] 2025-10-07 11:58:12,575 | INFO     | current chi2=0.6694340638889353 (change=11.157804599971435 %)
[2025-10-07 13:58:45] 2025-10-07 11:58:12,575 | INFO     | left removable region: 20
[2025-10-07 13:58:45] 2025-10-07 11:58:12,575 | INFO     | sum of square deviations: 5141528960.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,577 | INFO     | sum of deviations: -2074719373.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,577 | INFO     | mean x: 1759829818.0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,577 | INFO     | mean y: 2260720.0078431373
[2025-10-07 13:58:45] 2025-10-07 11:58:12,577 | INFO     | -- intersect: 712390536.4482166
[2025-10-07 13:58:45] 2025-10-07 11:58:12,577 | INFO     | intersect: 712390536.4482166
[2025-10-07 13:58:45] 2025-10-07 11:58:12,577 | INFO     | chi2: 0.0025974575947625925
[2025-10-07 13:58:45] 2025-10-07 11:58:12,577 | INFO     | -- intersect: 712390536.4482166
[2025-10-07 13:58:45] 2025-10-07 11:58:12,577 | INFO     | current memory leak: -0.40 B/s (using 255 data points, chi2=0.00)
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | could have reported an average CPU frequency of 2960 MHz (13 samples)
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | ..............................
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | . Timing measurements:
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | . get job = 0 s
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | . initial setup = 1 s
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | . payload setup = 3 s
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | . stage-in = 0 s
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | . payload execution = 17405 s
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | . stage-out = 1 s
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | . log creation = 0 s
[2025-10-07 13:58:45] 2025-10-07 11:58:12,578 | INFO     | ..............................
[2025-10-07 13:58:45] 2025-10-07 11:58:12,811 | INFO     | 
[2025-10-07 13:58:45] 2025-10-07 11:58:12,811 | INFO     | job summary report
[2025-10-07 13:58:45] 2025-10-07 11:58:12,811 | INFO     | --------------------------------------------------
[2025-10-07 13:58:45] 2025-10-07 11:58:12,811 | INFO     | PanDA job id: 6833155170
[2025-10-07 13:58:45] 2025-10-07 11:58:12,811 | INFO     | task id: 46376905
[2025-10-07 13:58:45] 2025-10-07 11:58:12,811 | INFO     | errors: (none)
[2025-10-07 13:58:45] 2025-10-07 11:58:12,811 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 13:58:45] 2025-10-07 11:58:12,812 | INFO     | pilot state: finished 
[2025-10-07 13:58:45] 2025-10-07 11:58:12,812 | INFO     | transexitcode: 0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,812 | INFO     | exeerrorcode: 0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,812 | INFO     | exeerrordiag: 
[2025-10-07 13:58:45] 2025-10-07 11:58:12,812 | INFO     | exitcode: 0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,812 | INFO     | exitmsg: OK
[2025-10-07 13:58:45] 2025-10-07 11:58:12,812 | INFO     | cpuconsumptiontime: 33941 s
[2025-10-07 13:58:45] 2025-10-07 11:58:12,813 | INFO     | nevents: 400
[2025-10-07 13:58:45] 2025-10-07 11:58:12,813 | INFO     | neventsw: 0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,813 | INFO     | pid: 979772
[2025-10-07 13:58:45] 2025-10-07 11:58:12,813 | INFO     | pgrp: 979772
[2025-10-07 13:58:45] 2025-10-07 11:58:12,813 | INFO     | corecount: 2
[2025-10-07 13:58:45] 2025-10-07 11:58:12,813 | INFO     | event service: False
[2025-10-07 13:58:45] 2025-10-07 11:58:12,813 | INFO     | sizes: {0: 2348656, 1: 2348855, 3: 2349117, 11: 2349145, 17412: 2381333, 17414: 2390345, 17415: 2390529, 17449: 2390723}
[2025-10-07 13:58:45] 2025-10-07 11:58:12,813 | INFO     | --------------------------------------------------
[2025-10-07 13:58:45] 2025-10-07 11:58:12,814 | INFO     | 
[2025-10-07 13:58:45] 2025-10-07 11:58:12,814 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-07 13:58:45] 2025-10-07 11:58:12,831 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,831 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,831 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,831 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,831 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,831 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,833 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 13:58:45] 2025-10-07 11:58:12,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,833 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 13:58:45] 2025-10-07 11:58:12,834 | INFO     | job 6833155170 has completed (purged errors)
[2025-10-07 13:58:45] 2025-10-07 11:58:12,834 | INFO     | overall cleanup function is called
[2025-10-07 13:58:45] 2025-10-07 11:58:13,840 | INFO     | --- collectZombieJob: --- 10, [979772]
[2025-10-07 13:58:45] 2025-10-07 11:58:13,840 | INFO     | zombie collector waiting for pid 979772
[2025-10-07 13:58:45] 2025-10-07 11:58:13,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 13:58:45] 2025-10-07 11:58:13,840 | INFO     | collected zombie processes
[2025-10-07 13:58:45] 2025-10-07 11:58:13,841 | INFO     | will attempt to kill all subprocesses of pid=979772
[2025-10-07 13:58:45] 2025-10-07 11:58:13,906 | INFO     | process IDs to be killed: [979772] (in reverse order)
[2025-10-07 13:58:45] 2025-10-07 11:58:13,933 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 13:58:45] 2025-10-07 11:58:13,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 13:58:45] 2025-10-07 11:58:13,935 | INFO     | did not find any defunct processes belonging to 979772
[2025-10-07 13:58:45] 2025-10-07 11:58:13,936 | INFO     | did not find any defunct processes belonging to 979772
[2025-10-07 13:58:45] 2025-10-07 11:58:13,936 | INFO     | ready for new job
[2025-10-07 13:58:45] 2025-10-07 11:58:13,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 13:58:45] 2025-10-07 11:58:13,937 | INFO     | ***************************************
[2025-10-07 13:58:45] 2025-10-07 11:58:13,937 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 13:58:45] 2025-10-07 11:58:13,937 | INFO     | ***************************************
[2025-10-07 13:58:45] 2025-10-07 11:58:13,937 | INFO     | 
[2025-10-07 13:58:45] 2025-10-07 11:58:13,955 | INFO     | architecture information:
[2025-10-07 13:58:45] 2025-10-07 11:58:13,955 | INFO     | executing command: cat /etc/os-release
[2025-10-07 13:58:45] 2025-10-07 11:58:13,967 | INFO     | cat /etc/os-release:
[2025-10-07 13:58:45] NAME="CentOS Linux"
[2025-10-07 13:58:45] VERSION="7 (Core)"
[2025-10-07 13:58:45] ID="centos"
[2025-10-07 13:58:45] ID_LIKE="rhel fedora"
[2025-10-07 13:58:45] VERSION_ID="7"
[2025-10-07 13:58:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 13:58:45] ANSI_COLOR="0;31"
[2025-10-07 13:58:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 13:58:45] HOME_URL="https://www.centos.org/"
[2025-10-07 13:58:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 13:58:45] 
[2025-10-07 13:58:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 13:58:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 13:58:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 13:58:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 13:58:45] 
[2025-10-07 13:58:45] 2025-10-07 11:58:13,967 | INFO     | ***************************************
[2025-10-07 13:58:45] 2025-10-07 11:58:14,468 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-07 13:58:45] 2025-10-07 11:58:14,481 | INFO     | sufficient remaining disk space (418369241088 B)
[2025-10-07 13:58:45] 2025-10-07 11:58:14,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 13:58:45] 2025-10-07 11:58:14,481 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 13:58:45] 2025-10-07 11:58:14,482 | INFO     | update_server=False
[2025-10-07 13:58:45] 2025-10-07 11:58:14,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 13:58:45] 2025-10-07 11:58:14,482 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 13:58:45] 2025-10-07 11:58:14,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 13:58:45] 2025-10-07 11:58:14,483 | INFO     | aborting loop
[2025-10-07 13:58:45] 2025-10-07 11:58:14,756 | INFO     | all data control threads have been joined
[2025-10-07 13:58:45] 2025-10-07 11:58:15,199 | INFO     | all payload control threads have been joined
[2025-10-07 13:58:45] 2025-10-07 11:58:15,438 | INFO     | all job control threads have been joined
[2025-10-07 13:58:45] 2025-10-07 11:58:15,487 | INFO     | [job] retrieve thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:15,487 | INFO     | [job] job monitor thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:15,488 | INFO     | [job] queue monitor thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:15,560 | INFO     | [data] copytool_in thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:15,579 | INFO     | [payload] failed_post thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:15,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 13:58:45] 2025-10-07 11:58:15,759 | INFO     | [data] control thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:15,899 | INFO     | [job] validate thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:16,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 13:58:45] 2025-10-07 11:58:16,204 | INFO     | [payload] control thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:16,441 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:16,442 | INFO     | [job] control thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:16,578 | INFO     | [payload] validate_post thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:16,583 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:16,706 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:16,803 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:17,706 | INFO     | [data] copytool_out thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:20,084 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 13:58:45] 2025-10-07 11:58:38,162 | INFO     | [monitor] cgroup control has ended
[2025-10-07 13:58:45] 2025-10-07 11:58:39,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140415845615424)>', '<ExcThread(monitor, started 140415390951168)>']
[2025-10-07 13:58:45] 2025-10-07 11:58:44,683 | INFO     | all workflow threads have been joined
[2025-10-07 13:58:45] 2025-10-07 11:58:44,683 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 13:58:45] 2025-10-07 11:58:44,683 | INFO     | traces error code: 0
[2025-10-07 13:58:45] 2025-10-07 11:58:44,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 13:58:45] 2025-10-07 11:58:45,123 | INFO     | PID=973432 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 13:58:45] 2025-10-07 11:58:45,124 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 13:58:45] 2025-10-07 11:58:45,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 13:58:45] 2025-10-07 11:58:45,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 13:58:45] 2025-10-07 11:58:45,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 13:58:45] 2025-10-07 11:58:45,124 | INFO     | [monitor] control thread has ended
[2025-10-07 13:58:45] 2025-10-07 11:58:45,204 [wrapper] ==== pilot stdout END ====
[2025-10-07 13:58:45] 2025-10-07 11:58:45,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 13:58:45] 2025-10-07 11:58:45,206 [wrapper] pilotpid: 973432
[2025-10-07 13:58:45] 2025-10-07 11:58:45,208 [wrapper] Pilot exit status: 0
[2025-10-07 13:58:45] 2025-10-07 11:58:45,214 [wrapper] pandaids: 6833155170
[2025-10-07 13:58:45] 2025-10-07 11:58:45,228 [wrapper] cleanup supervisor_pilot 1007942 973433
[2025-10-07 13:58:45] 2025-10-07 11:58:45,229 [wrapper] Test setup, not cleaning
[2025-10-07 13:58:45] 2025-10-07 11:58:45,231 [wrapper] apfmon messages muted
[2025-10-07 13:58:45] 2025-10-07 11:58:45,232 [wrapper] ==== wrapper stdout END ====
[2025-10-07 13:58:45] 2025-10-07 11:58:45,234 [wrapper] ==== wrapper stderr END ====
[2025-10-07 13:58:45]  *** Error codes and diagnostics ***
[2025-10-07 13:58:45]     "exeErrorCode": 0,
[2025-10-07 13:58:45]     "exeErrorDiag": "",
[2025-10-07 13:58:45]     "pilotErrorCode": 0,
[2025-10-07 13:58:45]     "pilotErrorDiag": "",
[2025-10-07 13:58:45]  *** Listing of results directory ***
[2025-10-07 13:58:45] total 394484
[2025-10-07 13:58:45] -rw-r--r-- 1 root root    552446 Oct  7 00:56 pilot3.tar.gz
[2025-10-07 13:58:45] -rw-r--r-- 1 root root      5112 Oct  7 01:17 queuedata.json
[2025-10-07 13:58:45] -rwx------ 1 4871 1028     36292 Oct  7 01:17 runpilot2-wrapper.sh
[2025-10-07 13:58:45] -rw-r--r-- 1 root root       100 Oct  7 09:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 13:58:45] -rwxr-xr-x 1 root root      7986 Oct  7 09:07 run_atlas
[2025-10-07 13:58:45] -rw-r--r-- 1 root root       105 Oct  7 09:07 job.xml
[2025-10-07 13:58:45] -rw-r--r-- 2 root root     15120 Oct  7 09:07 start_atlas.sh
[2025-10-07 13:58:45] drwxrwx--x 2 root root      4096 Oct  7 09:07 shared
[2025-10-07 13:58:45] -rw-r--r-- 2 root root    565599 Oct  7 09:07 input.tar.gz
[2025-10-07 13:58:45] -rw-r--r-- 1 root root      6136 Oct  7 09:07 init_data.xml
[2025-10-07 13:58:45] -rw-r--r-- 2 root root 216554888 Oct  7 09:07 EVNT.46376901._004525.pool.root.1
[2025-10-07 13:58:45] -rw-r--r-- 1 root root         0 Oct  7 09:07 boinc_lockfile
[2025-10-07 13:58:45] -rw-r--r-- 1 root root      2521 Oct  7 09:07 pandaJob.out
[2025-10-07 13:58:45] -rw------- 1 root root    974976 Oct  7 09:07 agis_schedconf.cvmfs.json
[2025-10-07 13:58:45] drwxr-xr-x 4  320  320      4096 Oct  7 09:07 pilot3
[2025-10-07 13:58:45] -rw------- 1 root root 177899059 Oct  7 13:57 HITS.46376905._122087.pool.root.1
[2025-10-07 13:58:45] -rw-r--r-- 1 root root       530 Oct  7 13:57 boinc_task_state.xml
[2025-10-07 13:58:45] -rw------- 1 root root      1046 Oct  7 13:57 memory_monitor_summary.json
[2025-10-07 13:58:45] -rw------- 1 root root   1560401 Oct  7 13:57 agis_ddmendpoints.agis.ALL.json
[2025-10-07 13:58:45] -rw------- 1 root root    407092 Oct  7 13:57 log.46376905._122087.job.log.tgz.1
[2025-10-07 13:58:45] -rw------- 1 root root      7783 Oct  7 13:58 heartbeat.json
[2025-10-07 13:58:45] -rw-r--r-- 1 root root        28 Oct  7 13:58 wrapper_checkpoint.txt
[2025-10-07 13:58:45] -rw-r--r-- 1 root root      8192 Oct  7 13:58 boinc_mmap_file
[2025-10-07 13:58:45] -rw------- 1 root root       746 Oct  7 13:58 pilotlog.txt
[2025-10-07 13:58:45] -rw------- 1 root root        95 Oct  7 13:58 pilot_heartbeat.json
[2025-10-07 13:58:45] -rw------- 1 root root   2404213 Oct  7 13:58 log.46376905._122087.job.log.1
[2025-10-07 13:58:45] -rw------- 1 root root       357 Oct  7 13:58 output.list
[2025-10-07 13:58:45] -rw-r--r-- 1 root root       620 Oct  7 13:58 runtime_log
[2025-10-07 13:58:45] -rw------- 1 root root   2826240 Oct  7 13:58 result.tar.gz
[2025-10-07 13:58:45] -rw-r--r-- 1 root root      8767 Oct  7 13:58 runtime_log.err
[2025-10-07 13:58:45] -rw------- 1 root root       654 Oct  7 13:58 dTFKDmgd9P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsNKMDmiIBrTm.diag
[2025-10-07 13:58:45] -rw-r--r-- 1 root root     20972 Oct  7 13:58 stderr.txt
[2025-10-07 13:58:45] HITS file was successfully produced:
[2025-10-07 13:58:45] -rw------- 1 root root 177899059 Oct  7 13:57 shared/HITS.pool.root.1
[2025-10-07 13:58:45]  *** Contents of shared directory: ***
[2025-10-07 13:58:45] total 388548
[2025-10-07 13:58:45] -rw-r--r-- 2 root root     15120 Oct  7 09:07 start_atlas.sh
[2025-10-07 13:58:45] -rw-r--r-- 2 root root    565599 Oct  7 09:07 input.tar.gz
[2025-10-07 13:58:45] -rw-r--r-- 2 root root 216554888 Oct  7 09:07 ATLAS.root_0
[2025-10-07 13:58:45] -rw------- 1 root root 177899059 Oct  7 13:57 HITS.pool.root.1
[2025-10-07 13:58:45] -rw------- 1 root root   2826240 Oct  7 13:58 result.tar.gz
13:58:46 (969792): run_atlas exited; CPU time 34066.523595
13:58:46 (969792): called boinc_finish(0)

</stderr_txt>
]]>

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