Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:12:53 (3123894): wrapper (7.7.26015): starting
23:12:53 (3123894): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 23:12:53] Arguments: --nthreads 8
[2025-10-06 23:12:53] Threads: 8
[2025-10-06 23:12:53] Checking for CVMFS
[2025-10-06 23:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 23:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 23:12:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 23:12:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 23:12:54] 2.13.2.0 704839 117247 254052 151420 0 512 34900381 40960001 21236 16776704 1 272101655 99.693 220161969 35868 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-06 23:12:54] CVMFS is ok
[2025-10-06 23:12:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 23:12:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 23:12:54] Further information can be found at the LHC@home message board.
[2025-10-06 23:12:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 23:12:54] Checking for apptainer binary...
[2025-10-06 23:12:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 23:12:54] Running /usr/bin/apptainer --version
[2025-10-06 23:12:54] apptainer version 1.4.2-1.el9
[2025-10-06 23:12:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 23:12:54] c-212-4.aglt2.org
[2025-10-06 23:12:54] apptainer works
[2025-10-06 23:12:55] Set ATHENA_PROC_NUMBER=8
[2025-10-06 23:12:55] Set ATHENA_CORE_NUMBER=8
[2025-10-06 23:12:55] Starting ATLAS job with PandaID=6830858509
[2025-10-06 23:12:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 01:33:40]  *** The last 200 lines of the pilot log: ***
[2025-10-07 01:33:40] 2025-10-07 05:06:50,639 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 01:33:40] 2025-10-07 05:06:50,641 | INFO     | fitting pss+swap vs Time
[2025-10-07 01:33:40] 2025-10-07 05:06:50,642 | INFO     | sum of square deviations: 424045160.0
[2025-10-07 01:33:40] 2025-10-07 05:06:50,642 | INFO     | sum of deviations: 14020019790.0
[2025-10-07 01:33:40] 2025-10-07 05:06:50,642 | INFO     | mean x: 1759810184.0
[2025-10-07 01:33:40] 2025-10-07 05:06:50,642 | INFO     | mean y: 2466255.225225225
[2025-10-07 01:33:40] 2025-10-07 05:06:50,642 | INFO     | -- intersect: -58181368707.83281
[2025-10-07 01:33:40] 2025-10-07 05:06:50,642 | INFO     | intersect: -58181368707.83281
[2025-10-07 01:33:40] 2025-10-07 05:06:50,649 | INFO     | chi2: 1.628133091832332
[2025-10-07 01:33:40] 2025-10-07 05:06:50,649 | INFO     | sum of square deviations: 369281342.5
[2025-10-07 01:33:40] 2025-10-07 05:06:50,649 | INFO     | sum of deviations: 13614780990.999998
[2025-10-07 01:33:40] 2025-10-07 05:06:50,649 | INFO     | mean x: 1759810031.5
[2025-10-07 01:33:40] 2025-10-07 05:06:50,649 | INFO     | mean y: 2465126.0566037735
[2025-10-07 01:33:40] 2025-10-07 05:06:50,649 | INFO     | -- intersect: -64878766084.90637
[2025-10-07 01:33:40] 2025-10-07 05:06:50,650 | INFO     | intersect: -64878766084.90637
[2025-10-07 01:33:40] 2025-10-07 05:06:50,650 | INFO     | chi2: 1.630549734881664
[2025-10-07 01:33:40] 2025-10-07 05:06:50,650 | INFO     | current chi2=1.630549734881664 (change=-0.148430313311318 %)
[2025-10-07 01:33:40] 2025-10-07 05:06:50,650 | INFO     | right removable region: 105
[2025-10-07 01:33:40] 2025-10-07 05:06:50,650 | INFO     | sum of square deviations: 369281342.5
[2025-10-07 01:33:40] 2025-10-07 05:06:50,650 | INFO     | sum of deviations: -3710198516.5000005
[2025-10-07 01:33:40] 2025-10-07 05:06:50,650 | INFO     | mean x: 1759810336.5
[2025-10-07 01:33:40] 2025-10-07 05:06:50,651 | INFO     | mean y: 2514676.7075471696
[2025-10-07 01:33:40] 2025-10-07 05:06:50,651 | INFO     | -- intersect: 17683466699.90289
[2025-10-07 01:33:40] 2025-10-07 05:06:50,651 | INFO     | intersect: 17683466699.90289
[2025-10-07 01:33:40] 2025-10-07 05:06:50,651 | INFO     | chi2: 0.037114672122405386
[2025-10-07 01:33:40] 2025-10-07 05:06:50,651 | INFO     | current chi2=0.037114672122405386 (change=97.72041534512171 %)
[2025-10-07 01:33:40] 2025-10-07 05:06:50,651 | INFO     | sum of square deviations: 319447850.0
[2025-10-07 01:33:40] 2025-10-07 05:06:50,651 | INFO     | sum of deviations: -5379504417.0
[2025-10-07 01:33:40] 2025-10-07 05:06:50,651 | INFO     | mean x: 1759810489.0
[2025-10-07 01:33:40] 2025-10-07 05:06:50,651 | INFO     | mean y: 2519647.801980198
[2025-10-07 01:33:40] 2025-10-07 05:06:50,652 | INFO     | -- intersect: 29637742732.4414
[2025-10-07 01:33:40] 2025-10-07 05:06:50,652 | INFO     | intersect: 29637742732.4414
[2025-10-07 01:33:40] 2025-10-07 05:06:50,652 | INFO     | chi2: 0.009868811769663323
[2025-10-07 01:33:40] 2025-10-07 05:06:50,652 | INFO     | current chi2=0.009868811769663323 (change=73.40994489425728 %)
[2025-10-07 01:33:40] 2025-10-07 05:06:50,652 | INFO     | sum of square deviations: 274312120.0
[2025-10-07 01:33:40] 2025-10-07 05:06:50,652 | INFO     | sum of deviations: -5018210780.499999
[2025-10-07 01:33:40] 2025-10-07 05:06:50,652 | INFO     | mean x: 1759810641.5
[2025-10-07 01:33:40] 2025-10-07 05:06:50,656 | INFO     | mean y: 2518416.9895833335
[2025-10-07 01:33:40] 2025-10-07 05:06:50,657 | INFO     | -- intersect: 32196140531.87798
[2025-10-07 01:33:40] 2025-10-07 05:06:50,657 | INFO     | intersect: 32196140531.87798
[2025-10-07 01:33:40] 2025-10-07 05:06:50,657 | INFO     | chi2: 0.009203674306759795
[2025-10-07 01:33:40] 2025-10-07 05:06:50,657 | INFO     | current chi2=0.009203674306759795 (change=6.73979277777044 %)
[2025-10-07 01:33:40] 2025-10-07 05:06:50,657 | INFO     | left removable region: 30
[2025-10-07 01:33:40] 2025-10-07 05:06:50,657 | INFO     | sum of square deviations: 130793150.0
[2025-10-07 01:33:40] 2025-10-07 05:06:50,657 | INFO     | sum of deviations: -2863337865.0000005
[2025-10-07 01:33:40] 2025-10-07 05:06:50,657 | INFO     | mean x: 1759810916.0
[2025-10-07 01:33:40] 2025-10-07 05:06:50,657 | INFO     | mean y: 2512110.8533333335
[2025-10-07 01:33:40] 2025-10-07 05:06:50,658 | INFO     | -- intersect: 38528484082.80397
[2025-10-07 01:33:40] 2025-10-07 05:06:50,658 | INFO     | intersect: 38528484082.80397
[2025-10-07 01:33:40] 2025-10-07 05:06:50,658 | INFO     | chi2: 0.008084941949643648
[2025-10-07 01:33:40] 2025-10-07 05:06:50,658 | INFO     | -- intersect: 38528484082.80397
[2025-10-07 01:33:40] 2025-10-07 05:06:50,658 | INFO     | current memory leak: -21.89 B/s (using 75 data points, chi2=0.01)
[2025-10-07 01:33:40] 2025-10-07 05:06:50,658 | INFO     | could have reported an average CPU frequency of 3048 MHz (7 samples)
[2025-10-07 01:33:40] 2025-10-07 05:06:50,658 | INFO     | ..............................
[2025-10-07 01:33:40] 2025-10-07 05:06:50,658 | INFO     | . Timing measurements:
[2025-10-07 01:33:40] 2025-10-07 05:06:50,659 | INFO     | . get job = 0 s
[2025-10-07 01:33:40] 2025-10-07 05:06:50,659 | INFO     | . initial setup = 3 s
[2025-10-07 01:33:40] 2025-10-07 05:06:50,659 | INFO     | . payload setup = 10 s
[2025-10-07 01:33:40] 2025-10-07 05:06:50,659 | INFO     | . stage-in = 0 s
[2025-10-07 01:33:40] 2025-10-07 05:06:50,659 | INFO     | . payload execution = 6767 s
[2025-10-07 01:33:40] 2025-10-07 05:06:50,659 | INFO     | . stage-out = 1 s
[2025-10-07 01:33:40] 2025-10-07 05:06:50,659 | INFO     | . log creation = 0 s
[2025-10-07 01:33:40] 2025-10-07 05:06:50,659 | INFO     | ..............................
[2025-10-07 01:33:40] 2025-10-07 05:06:50,671 | INFO     | time since job start (6816s) is within the limit (172800.0s)
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | 
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | job summary report
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | --------------------------------------------------
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | PanDA job id: 6830858509
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | task id: 46376905
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | errors: (none)
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | pilot state: finished 
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | transexitcode: 0
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | exeerrorcode: 0
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | exeerrordiag: 
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | exitcode: 0
[2025-10-07 01:33:40] 2025-10-07 05:06:51,200 | INFO     | exitmsg: OK
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | cpuconsumptiontime: 29470 s
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | nevents: 400
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | neventsw: 0
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | pid: 3136651
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | pgrp: 3136651
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | corecount: 8
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | event service: False
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | sizes: {0: 2348645, 1: 2348844, 9: 2349106, 12: 2349134, 6781: 2376300, 6784: 2385298, 6786: 2385482, 6799: 2385676}
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | --------------------------------------------------
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | 
[2025-10-07 01:33:40] 2025-10-07 05:06:51,201 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 01:33:40] 2025-10-07 05:06:51,226 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,228 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,228 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,228 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,228 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,228 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 01:33:40] 2025-10-07 05:06:51,228 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,228 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 01:33:40] 2025-10-07 05:06:51,228 | INFO     | job 6830858509 has completed (purged errors)
[2025-10-07 01:33:40] 2025-10-07 05:06:51,228 | INFO     | overall cleanup function is called
[2025-10-07 01:33:40] 2025-10-07 05:06:52,236 | INFO     | --- collectZombieJob: --- 10, [3136651]
[2025-10-07 01:33:40] 2025-10-07 05:06:52,236 | INFO     | zombie collector waiting for pid 3136651
[2025-10-07 01:33:40] 2025-10-07 05:06:52,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 01:33:40] 2025-10-07 05:06:52,236 | INFO     | collected zombie processes
[2025-10-07 01:33:40] 2025-10-07 05:06:52,236 | INFO     | will attempt to kill all subprocesses of pid=3136651
[2025-10-07 01:33:40] 2025-10-07 05:06:52,736 | INFO     | process IDs to be killed: [3136651] (in reverse order)
[2025-10-07 01:33:40] 2025-10-07 05:06:52,888 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 01:33:40] 2025-10-07 05:06:52,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 01:33:40] 2025-10-07 05:06:52,907 | INFO     | did not find any defunct processes belonging to 3136651
[2025-10-07 01:33:40] 2025-10-07 05:06:52,926 | INFO     | did not find any defunct processes belonging to 3136651
[2025-10-07 01:33:40] 2025-10-07 05:06:52,926 | INFO     | ready for new job
[2025-10-07 01:33:40] 2025-10-07 05:06:52,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 01:33:40] 2025-10-07 05:06:52,928 | INFO     | ***************************************
[2025-10-07 01:33:40] 2025-10-07 05:06:52,928 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 01:33:40] 2025-10-07 05:06:52,928 | INFO     | ***************************************
[2025-10-07 01:33:40] 2025-10-07 05:06:52,928 | INFO     | 
[2025-10-07 01:33:40] 2025-10-07 05:06:52,934 | INFO     | architecture information:
[2025-10-07 01:33:40] 2025-10-07 05:06:52,934 | INFO     | executing command: cat /etc/os-release
[2025-10-07 01:33:40] 2025-10-07 05:06:52,995 | INFO     | cat /etc/os-release:
[2025-10-07 01:33:40] NAME="CentOS Linux"
[2025-10-07 01:33:40] VERSION="7 (Core)"
[2025-10-07 01:33:40] ID="centos"
[2025-10-07 01:33:40] ID_LIKE="rhel fedora"
[2025-10-07 01:33:40] VERSION_ID="7"
[2025-10-07 01:33:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 01:33:40] ANSI_COLOR="0;31"
[2025-10-07 01:33:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 01:33:40] HOME_URL="https://www.centos.org/"
[2025-10-07 01:33:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 01:33:40] 
[2025-10-07 01:33:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 01:33:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 01:33:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 01:33:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 01:33:40] 
[2025-10-07 01:33:40] 2025-10-07 05:06:52,995 | INFO     | ***************************************
[2025-10-07 01:33:40] 2025-10-07 05:06:53,498 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 01:33:40] 2025-10-07 05:06:53,525 | INFO     | sufficient remaining disk space (126898667520 B)
[2025-10-07 01:33:40] 2025-10-07 05:06:53,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 01:33:40] 2025-10-07 05:06:53,525 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 01:33:40] 2025-10-07 05:06:53,525 | INFO     | update_server=False
[2025-10-07 01:33:40] 2025-10-07 05:06:53,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 01:33:40] 2025-10-07 05:06:53,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 01:33:40] 2025-10-07 05:06:53,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 01:33:40] 2025-10-07 05:06:53,528 | INFO     | aborting loop
[2025-10-07 01:33:40] 2025-10-07 05:06:53,635 | INFO     | all data control threads have been joined
[2025-10-07 01:33:40] 2025-10-07 05:06:53,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 01:33:40] 2025-10-07 05:06:54,220 | INFO     | all payload control threads have been joined
[2025-10-07 01:33:40] 2025-10-07 05:06:54,532 | INFO     | [job] retrieve thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:54,533 | INFO     | [job] job monitor thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:54,645 | INFO     | [data] control thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:54,756 | INFO     | [job] validate thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:55,083 | INFO     | [payload] failed_post thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:55,092 | INFO     | all job control threads have been joined
[2025-10-07 01:33:40] 2025-10-07 05:06:55,172 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:55,194 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:55,247 | INFO     | [payload] control thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:55,395 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:55,533 | INFO     | [payload] validate_post thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:55,772 | INFO     | [data] copytool_out thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:55,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 01:33:40] 2025-10-07 05:06:55,906 | INFO     | [data] copytool_in thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:56,102 | INFO     | [job] control thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:56,825 | INFO     | [job] queue monitor thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:06:57,535 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:07:04,270 | INFO     | job.realtimelogging is not enabled
[2025-10-07 01:33:40] 2025-10-07 05:07:05,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 01:33:40] 2025-10-07 05:07:24,213 | INFO     | PID=3129704 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 01:33:40] 2025-10-07 05:07:24,213 | INFO     | .. there are 19 such processes running
[2025-10-07 01:33:40] 2025-10-07 05:07:24,214 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 01:33:40] 2025-10-07 05:07:24,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 01:33:40] 2025-10-07 05:07:24,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 01:33:40] 2025-10-07 05:07:25,366 | INFO     | [monitor] cgroup control has ended
[2025-10-07 01:33:40] 2025-10-07 05:07:27,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140312217749312)>', '<ExcThread(monitor, started 140311724541696)>']
[2025-10-07 01:33:40] 2025-10-07 05:07:27,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 01:33:40] 2025-10-07 05:07:27,233 | INFO     | [monitor] control thread has ended
[2025-10-07 01:33:40] 2025-10-07 05:07:32,070 | INFO     | all workflow threads have been joined
[2025-10-07 01:33:40] 2025-10-07 05:07:32,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 01:33:40] 2025-10-07 05:07:32,071 | INFO     | traces error code: 0
[2025-10-07 01:33:40] 2025-10-07 05:07:32,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 01:33:40] 2025-10-07 05:07:32,323 [wrapper] ==== pilot stdout END ====
[2025-10-07 01:33:40] 2025-10-07 05:07:32,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 01:33:40] 2025-10-07 05:07:32,328 [wrapper] pilotpid: 3129704
[2025-10-07 01:33:40] 2025-10-07 05:07:32,330 [wrapper] Pilot exit status: 0
[2025-10-07 01:33:40] 2025-10-07 05:07:32,342 [wrapper] pandaids: 6830858509
[2025-10-07 01:33:40] 2025-10-07 05:07:32,426 [wrapper] cleanup supervisor_pilot 3404544 3129706
[2025-10-07 01:33:40] 2025-10-07 05:07:32,428 [wrapper] Test setup, not cleaning
[2025-10-07 01:33:40] 2025-10-07 05:07:32,431 [wrapper] apfmon messages muted
[2025-10-07 01:33:40] 2025-10-07 05:07:32,433 [wrapper] ==== wrapper stdout END ====
[2025-10-07 01:33:40] 2025-10-07 05:07:32,435 [wrapper] ==== wrapper stderr END ====
[2025-10-07 01:33:40]  *** Error codes and diagnostics ***
[2025-10-07 01:33:40]     "exeErrorCode": 0,
[2025-10-07 01:33:40]     "exeErrorDiag": "",
[2025-10-07 01:33:40]     "pilotErrorCode": 0,
[2025-10-07 01:33:40]     "pilotErrorDiag": "",
[2025-10-07 01:33:40]  *** Listing of results directory ***
[2025-10-07 01:33:40] total 386656
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 23:58 pilot3.tar.gz
[2025-10-07 01:33:40] -rwx------. 1 boincer umatlas     36292 Oct  5 00:11 runpilot2-wrapper.sh
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 00:11 queuedata.json
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas       100 Oct  6 23:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 01:33:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 23:12 run_atlas
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas       105 Oct  6 23:12 job.xml
[2025-10-07 01:33:40] -rw-r--r--. 2 boincer umatlas 214905537 Oct  6 23:12 EVNT.46376901._002766.pool.root.1
[2025-10-07 01:33:40] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 23:12 start_atlas.sh
[2025-10-07 01:33:40] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 23:12 shared
[2025-10-07 01:33:40] -rw-r--r--. 2 boincer umatlas    565598 Oct  6 23:12 input.tar.gz
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas         0 Oct  6 23:12 boinc_lockfile
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas      2519 Oct  6 23:12 pandaJob.out
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas    974984 Oct  6 23:13 agis_schedconf.cvmfs.json
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas   1560401 Oct  6 23:13 agis_ddmendpoints.agis.ALL.json
[2025-10-07 01:33:40] drwx------. 4 boincer umatlas      4096 Oct  6 23:13 pilot3
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas 174534734 Oct  7 01:05 HITS.46376905._075764.pool.root.1
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas       529 Oct  7 01:05 boinc_task_state.xml
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas      1033 Oct  7 01:06 memory_monitor_summary.json
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas    350973 Oct  7 01:06 log.46376905._075764.job.log.tgz.1
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas      7776 Oct  7 01:06 heartbeat.json
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas        95 Oct  7 01:07 pilot_heartbeat.json
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas      4897 Oct  7 01:07 pilotlog.txt
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas    951497 Oct  7 01:07 log.46376905._075764.job.log.1
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas       357 Oct  7 01:07 output.list
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas       620 Oct  7 01:07 runtime_log
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas   1320960 Oct  7 01:07 result.tar.gz
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas       654 Oct  7 01:07 Wq8NDmwGVP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuzNNDmWSuHEn.diag
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas      8698 Oct  7 01:07 runtime_log.err
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas      6945 Oct  7 01:30 init_data.xml
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas        27 Oct  7 01:33 wrapper_checkpoint.txt
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas      8192 Oct  7 01:33 boinc_mmap_file
[2025-10-07 01:33:40] -rw-r--r--. 1 boincer umatlas     20918 Oct  7 01:33 stderr.txt
[2025-10-07 01:33:40] HITS file was successfully produced:
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas 174534734 Oct  7 01:05 shared/HITS.pool.root.1
[2025-10-07 01:33:40]  *** Contents of shared directory: ***
[2025-10-07 01:33:40] total 382188
[2025-10-07 01:33:40] -rw-r--r--. 2 boincer umatlas 214905537 Oct  6 23:12 ATLAS.root_0
[2025-10-07 01:33:40] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 23:12 start_atlas.sh
[2025-10-07 01:33:40] -rw-r--r--. 2 boincer umatlas    565598 Oct  6 23:12 input.tar.gz
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas 174534734 Oct  7 01:05 HITS.pool.root.1
[2025-10-07 01:33:40] -rw-------. 1 boincer umatlas   1320960 Oct  7 01:07 result.tar.gz
01:33:42 (3123894): run_atlas exited; CPU time 29615.156548
01:33:42 (3123894): called boinc_finish(0)

</stderr_txt>
]]>

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