Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:42:58 (3089913): wrapper (7.7.26015): starting
22:42:58 (3089913): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 22:42:58] Arguments: --nthreads 8
[2025-10-06 22:42:58] Threads: 8
[2025-10-06 22:42:58] Checking for CVMFS
[2025-10-06 22:42:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 22:42:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 22:42:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 22:43:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 22:43:01] 2.13.2.0 2038924 60783 277500 151420 1 614 30529633 32503808 77046 16776704 0 351113436 99.747 247015509 35774 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-06 22:43:01] CVMFS is ok
[2025-10-06 22:43:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 22:43:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 22:43:01] Further information can be found at the LHC@home message board.
[2025-10-06 22:43:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 22:43:01] Checking for apptainer binary...
[2025-10-06 22:43:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 22:43:01] Running /usr/bin/apptainer --version
[2025-10-06 22:43:01] apptainer version 1.4.2-1.el9
[2025-10-06 22:43:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 22:43:01] c8-7-1.aglt2.org
[2025-10-06 22:43:01] apptainer works
[2025-10-06 22:43:01] Set ATHENA_PROC_NUMBER=8
[2025-10-06 22:43:01] Set ATHENA_CORE_NUMBER=8
[2025-10-06 22:43:02] Starting ATLAS job with PandaID=6832861363
[2025-10-06 22:43:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 01:31:54]  *** The last 200 lines of the pilot log: ***
[2025-10-07 01:31:54] 2025-10-07 04:24:42,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:24:43,519 | INFO     | time since job start (6002s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:24:44,802 | INFO     | monitor loop #352: job 0:6832861363 is in state 'finished'
[2025-10-07 01:31:54] 2025-10-07 04:24:44,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:24:45,527 | INFO     | time since job start (6004s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:24:47,318 | INFO     | monitor loop #353: job 0:6832861363 is in state 'finished'
[2025-10-07 01:31:54] 2025-10-07 04:24:47,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:24:47,533 | INFO     | time since job start (6006s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:24:49,550 | INFO     | time since job start (6008s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:24:49,826 | INFO     | monitor loop #354: job 0:6832861363 is in state 'finished'
[2025-10-07 01:31:54] 2025-10-07 04:24:49,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:24:51,557 | INFO     | time since job start (6010s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:24:52,330 | INFO     | monitor loop #355: job 0:6832861363 is in state 'finished'
[2025-10-07 01:31:54] 2025-10-07 04:24:52,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:24:54,480 | INFO     | PID=3104944 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 01:31:54] 2025-10-07 04:24:54,480 | INFO     | .. there are 106 such processes running
[2025-10-07 01:31:54] 2025-10-07 04:24:54,854 | INFO     | monitor loop #356: job 0:6832861363 is in state 'finished'
[2025-10-07 01:31:54] 2025-10-07 04:24:54,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:24:55,481 | INFO     | time since job start (6014s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:24:57,365 | INFO     | monitor loop #357: job 0:6832861363 is in state 'finished'
[2025-10-07 01:31:54] 2025-10-07 04:24:57,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:24:57,488 | INFO     | time since job start (6016s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:24:59,494 | INFO     | time since job start (6018s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:24:59,884 | INFO     | monitor loop #358: job 0:6832861363 is in state 'finished'
[2025-10-07 01:31:54] 2025-10-07 04:24:59,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:25:01,500 | INFO     | time since job start (6020s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:25:02,408 | INFO     | monitor loop #359: job 0:6832861363 is in state 'finished'
[2025-10-07 01:31:54] 2025-10-07 04:25:02,408 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:25:03,507 | INFO     | time since job start (6022s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:25:04,915 | INFO     | monitor loop #360: job 0:6832861363 is in state 'finished'
[2025-10-07 01:31:54] 2025-10-07 04:25:04,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:25:05,515 | INFO     | time since job start (6024s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:25:07,420 | INFO     | monitor loop #361: job 0:6832861363 is in state 'finished'
[2025-10-07 01:31:54] 2025-10-07 04:25:07,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 01:31:54] 2025-10-07 04:25:07,522 | INFO     | time since job start (6026s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:25:08,734 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 01:31:54] 2025-10-07 04:25:08,743 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.994906249997
[2025-10-07 01:31:54] 2025-10-07 04:25:08,782 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6832861363/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 01:31:54] 2025-10-07 04:25:08,789 | INFO     | extracted standard info from prmon json
[2025-10-07 01:31:54] 2025-10-07 04:25:08,789 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 01:31:54] 2025-10-07 04:25:08,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 01:31:54] 2025-10-07 04:25:08,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 01:31:54] 2025-10-07 04:25:08,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 01:31:54] 2025-10-07 04:25:08,791 | INFO     | fitting pss+swap vs Time
[2025-10-07 01:31:54] 2025-10-07 04:25:08,791 | INFO     | sum of square deviations: 211277598.625
[2025-10-07 01:31:54] 2025-10-07 04:25:08,791 | INFO     | sum of deviations: 4400337161.875001
[2025-10-07 01:31:54] 2025-10-07 04:25:08,791 | INFO     | mean x: 1759808212.625
[2025-10-07 01:31:54] 2025-10-07 04:25:08,791 | INFO     | mean y: 2458921.965909091
[2025-10-07 01:31:54] 2025-10-07 04:25:08,791 | INFO     | -- intersect: -36649554950.69797
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | intersect: -36649554950.69797
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | chi2: 0.3888911271710365
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | -- intersect: -36649554950.69797
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | current memory leak: 20.83 B/s (using 88 data points, chi2=0.39)
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | ..............................
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | . Timing measurements:
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | . get job = 0 s
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | . initial setup = 8 s
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | . payload setup = 50 s
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | . stage-in = 0 s
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | . payload execution = 5829 s
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | . stage-out = 3 s
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | . log creation = 0 s
[2025-10-07 01:31:54] 2025-10-07 04:25:08,792 | INFO     | ..............................
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | 
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | job summary report
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | --------------------------------------------------
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | PanDA job id: 6832861363
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | task id: 46376905
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | errors: (none)
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | pilot state: finished 
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | transexitcode: 0
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | exeerrorcode: 0
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | exeerrordiag: 
[2025-10-07 01:31:54] 2025-10-07 04:25:09,504 | INFO     | exitcode: 0
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | exitmsg: OK
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | cpuconsumptiontime: 20203 s
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | nevents: 400
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | neventsw: 0
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | pid: 3149816
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | pgrp: 3149816
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | corecount: 8
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | event service: False
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | sizes: {0: 2348649, 1: 2348848, 12: 2348848, 23: 2348876, 34: 2348904, 38: 2349194, 45: 2349350, 5882: 2375965, 5883: 2375964, 5888: 2385074, 5940: 2385212}
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | --------------------------------------------------
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | 
[2025-10-07 01:31:54] 2025-10-07 04:25:09,505 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-07 01:31:54] 2025-10-07 04:25:09,528 | INFO     | time since job start (6028s) is within the limit (172800.0s)
[2025-10-07 01:31:54] 2025-10-07 04:25:09,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | job 6832861363 has completed (purged errors)
[2025-10-07 01:31:54] 2025-10-07 04:25:09,664 | INFO     | overall cleanup function is called
[2025-10-07 01:31:54] 2025-10-07 04:25:10,680 | INFO     | --- collectZombieJob: --- 10, [3149816]
[2025-10-07 01:31:54] 2025-10-07 04:25:10,680 | INFO     | zombie collector waiting for pid 3149816
[2025-10-07 01:31:54] 2025-10-07 04:25:10,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 01:31:54] 2025-10-07 04:25:10,680 | INFO     | collected zombie processes
[2025-10-07 01:31:54] 2025-10-07 04:25:10,680 | INFO     | will attempt to kill all subprocesses of pid=3149816
[2025-10-07 01:31:54] 2025-10-07 04:25:13,493 | INFO     | process IDs to be killed: [3149816] (in reverse order)
[2025-10-07 01:31:54] 2025-10-07 04:25:14,406 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 01:31:54] 2025-10-07 04:25:14,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 01:31:54] 2025-10-07 04:25:14,635 | INFO     | did not find any defunct processes belonging to 3149816
[2025-10-07 01:31:54] 2025-10-07 04:25:14,866 | INFO     | did not find any defunct processes belonging to 3149816
[2025-10-07 01:31:54] 2025-10-07 04:25:14,866 | INFO     | ready for new job
[2025-10-07 01:31:54] 2025-10-07 04:25:14,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 01:31:54] 2025-10-07 04:25:14,867 | INFO     | ***************************************
[2025-10-07 01:31:54] 2025-10-07 04:25:14,867 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 01:31:54] 2025-10-07 04:25:14,867 | INFO     | ***************************************
[2025-10-07 01:31:54] 2025-10-07 04:25:14,867 | INFO     | 
[2025-10-07 01:31:54] 2025-10-07 04:25:14,905 | INFO     | architecture information:
[2025-10-07 01:31:54] 2025-10-07 04:25:14,919 | INFO     | executing command: cat /etc/os-release
[2025-10-07 01:31:54] 2025-10-07 04:25:14,981 | INFO     | cat /etc/os-release:
[2025-10-07 01:31:54] NAME="CentOS Linux"
[2025-10-07 01:31:54] VERSION="7 (Core)"
[2025-10-07 01:31:54] ID="centos"
[2025-10-07 01:31:54] ID_LIKE="rhel fedora"
[2025-10-07 01:31:54] VERSION_ID="7"
[2025-10-07 01:31:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 01:31:54] ANSI_COLOR="0;31"
[2025-10-07 01:31:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 01:31:54] HOME_URL="https://www.centos.org/"
[2025-10-07 01:31:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 01:31:54] 
[2025-10-07 01:31:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 01:31:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 01:31:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 01:31:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 01:31:54] 
[2025-10-07 01:31:54] 2025-10-07 04:25:14,981 | INFO     | ***************************************
[2025-10-07 01:31:54] 2025-10-07 04:25:15,500 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-07 01:31:54] 2025-10-07 04:25:15,529 | INFO     | sufficient remaining disk space (89451921408 B)
[2025-10-07 01:31:54] 2025-10-07 04:25:15,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 01:31:54] 2025-10-07 04:25:15,531 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 01:31:54] 2025-10-07 04:25:15,532 | INFO     | update_server=False
[2025-10-07 01:31:54] 2025-10-07 04:25:15,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 01:31:54] 2025-10-07 04:25:15,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 01:31:54] 2025-10-07 04:25:15,995 | INFO     | all payload control threads have been joined
[2025-10-07 01:31:54] 2025-10-07 04:25:16,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 01:31:54] 2025-10-07 04:25:16,016 | INFO     | aborting loop
[2025-10-07 01:31:54] 2025-10-07 04:25:16,283 | INFO     | all job control threads have been joined
[2025-10-07 01:31:54] 2025-10-07 04:25:16,527 | INFO     | all data control threads have been joined
[2025-10-07 01:31:54] 2025-10-07 04:25:16,570 | INFO     | [job] retrieve thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:16,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:16,781 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,002 | INFO     | [payload] control thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,030 | INFO     | [job] job monitor thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,296 | INFO     | [job] control thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 01:31:54] 2025-10-07 04:25:17,541 | INFO     | [data] control thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,547 | INFO     | [payload] validate_post thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,550 | INFO     | [data] copytool_out thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,559 | INFO     | [job] validate thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,816 | INFO     | [payload] failed_post thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,882 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,882 | INFO     | [data] copytool_in thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:17,986 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:18,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 01:31:54] 2025-10-07 04:25:19,266 | INFO     | [job] queue monitor thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:21,366 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 01:31:54] 2025-10-07 04:25:45,183 | INFO     | PID=3104944 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 01:31:54] 2025-10-07 04:25:45,184 | INFO     | .. there are 106 such processes running
[2025-10-07 01:31:54] 2025-10-07 04:25:45,184 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 01:31:54] 2025-10-07 04:25:45,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 01:31:54] 2025-10-07 04:25:45,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 01:31:54] 2025-10-07 04:25:51,551 | INFO     | [monitor] cgroup control has ended
[2025-10-07 01:31:54] 2025-10-07 04:25:52,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043584423744)>', '<ExcThread(monitor, started 140042500564736)>']
[2025-10-07 01:31:54] 2025-10-07 04:25:53,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 01:31:54] 2025-10-07 04:25:53,237 | INFO     | [monitor] control thread has ended
[2025-10-07 01:31:54] 2025-10-07 04:25:57,466 | INFO     | all workflow threads have been joined
[2025-10-07 01:31:54] 2025-10-07 04:25:57,474 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 01:31:54] 2025-10-07 04:25:57,474 | INFO     | traces error code: 0
[2025-10-07 01:31:54] 2025-10-07 04:25:57,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 01:31:54] 2025-10-07 04:25:57,903 [wrapper] ==== pilot stdout END ====
[2025-10-07 01:31:54] 2025-10-07 04:25:57,936 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 01:31:54] 2025-10-07 04:25:57,967 [wrapper] pilotpid: 3104944
[2025-10-07 01:31:54] 2025-10-07 04:25:57,982 [wrapper] Pilot exit status: 0
[2025-10-07 01:31:54] 2025-10-07 04:25:58,071 [wrapper] pandaids: 6832861363
[2025-10-07 01:31:54] 2025-10-07 04:25:58,616 [wrapper] cleanup supervisor_pilot  471394 3104945
[2025-10-07 01:31:54] 2025-10-07 04:25:58,654 [wrapper] Test setup, not cleaning
[2025-10-07 01:31:54] 2025-10-07 04:25:58,671 [wrapper] apfmon messages muted
[2025-10-07 01:31:54] 2025-10-07 04:25:58,694 [wrapper] ==== wrapper stdout END ====
[2025-10-07 01:31:54] 2025-10-07 04:25:58,715 [wrapper] ==== wrapper stderr END ====
[2025-10-07 01:31:54]  *** Error codes and diagnostics ***
[2025-10-07 01:31:54]     "exeErrorCode": 0,
[2025-10-07 01:31:54]     "exeErrorDiag": "",
[2025-10-07 01:31:54]     "pilotErrorCode": 0,
[2025-10-07 01:31:54]     "pilotErrorDiag": "",
[2025-10-07 01:31:54]  *** Listing of results directory ***
[2025-10-07 01:31:54] total 391140
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 13:44 queuedata.json
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 13:44 pilot3.tar.gz
[2025-10-07 01:31:54] -rwx------. 1 boincer umatlas     36292 Oct  6 13:47 runpilot2-wrapper.sh
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas       100 Oct  6 22:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 01:31:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 22:42 run_atlas
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas       105 Oct  6 22:42 job.xml
[2025-10-07 01:31:54] -rw-r--r--. 2 boincer umatlas 213873634 Oct  6 22:42 EVNT.46376901._004302.pool.root.1
[2025-10-07 01:31:54] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 22:42 start_atlas.sh
[2025-10-07 01:31:54] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 22:42 shared
[2025-10-07 01:31:54] -rw-r--r--. 2 boincer umatlas    565602 Oct  6 22:42 input.tar.gz
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas         0 Oct  6 22:42 boinc_lockfile
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas      2521 Oct  6 22:43 pandaJob.out
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas    974984 Oct  6 22:44 agis_schedconf.cvmfs.json
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas   1560401 Oct  6 22:44 agis_ddmendpoints.agis.ALL.json
[2025-10-07 01:31:54] drwx------. 4 boincer umatlas      4096 Oct  6 22:44 pilot3
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas 180617023 Oct  7 00:22 HITS.46376905._115990.pool.root.1
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas       530 Oct  7 00:23 boinc_task_state.xml
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas      1045 Oct  7 00:24 memory_monitor_summary.json
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas    348529 Oct  7 00:24 log.46376905._115990.job.log.tgz.1
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas      7801 Oct  7 00:25 heartbeat.json
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas        95 Oct  7 00:25 pilot_heartbeat.json
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas      4825 Oct  7 00:25 pilotlog.txt
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas    723978 Oct  7 00:25 log.46376905._115990.job.log.1
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas       357 Oct  7 00:25 output.list
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas       620 Oct  7 00:25 runtime_log
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas   1095680 Oct  7 00:25 result.tar.gz
[2025-10-07 01:31:54] -rw-------. 1 boincer umatlas       655 Oct  7 00:25 V7NODmQU4P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnBUNDmpp8GTn.diag
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas      8693 Oct  7 00:25 runtime_log.err
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas      7161 Oct  7 01:31 init_data.xml
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas      8192 Oct  7 01:31 boinc_mmap_file
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas        27 Oct  7 01:31 wrapper_checkpoint.txt
[2025-10-07 01:31:54] -rw-r--r--. 1 boincer umatlas     22370 Oct  7 01:31 stderr.txt
[2025-10-07 01:31:55] HITS file was successfully produced:
[2025-10-07 01:31:55] -rw-------. 1 boincer umatlas 180617023 Oct  7 00:22 shared/HITS.pool.root.1
[2025-10-07 01:31:55]  *** Contents of shared directory: ***
[2025-10-07 01:31:55] total 386896
[2025-10-07 01:31:55] -rw-r--r--. 2 boincer umatlas 213873634 Oct  6 22:42 ATLAS.root_0
[2025-10-07 01:31:55] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 22:42 start_atlas.sh
[2025-10-07 01:31:55] -rw-r--r--. 2 boincer umatlas    565602 Oct  6 22:42 input.tar.gz
[2025-10-07 01:31:55] -rw-------. 1 boincer umatlas 180617023 Oct  7 00:22 HITS.pool.root.1
[2025-10-07 01:31:55] -rw-------. 1 boincer umatlas   1095680 Oct  7 00:25 result.tar.gz
01:31:56 (3089913): run_atlas exited; CPU time 20405.812236
01:31:56 (3089913): called boinc_finish(0)

</stderr_txt>
]]>

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