Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
22:39:35 (817329): wrapper (7.7.26015): starting
22:39:35 (817329): wrapper: running run_atlas (--nthreads 4)
[2025-10-06 22:39:35] Arguments: --nthreads 4
[2025-10-06 22:39:35] Threads: 4
[2025-10-06 22:39:35] Checking for CVMFS
[2025-10-06 22:39:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 22:39:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 22:39:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 22:39:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 22:39:42] 2.11.0.0 817532 0 25244 151420 3 1 2371925 4096000 0 130560 0 0 0.000 1291 702 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-06 22:39:42] CVMFS is ok
[2025-10-06 22:39:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 22:39:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-06 22:39:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-06 22:39:42] Further information can be found at the LHC@home message board.
[2025-10-06 22:39:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 22:39:42] Checking for apptainer binary...
[2025-10-06 22:39:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 22:39:42] Running /usr/bin/apptainer --version
[2025-10-06 22:39:42] apptainer version 1.4.2-1.fc42
[2025-10-06 22:39:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 22:39:42] fedora
[2025-10-06 22:39:42] apptainer works
[2025-10-06 22:39:42] Set ATHENA_PROC_NUMBER=4
[2025-10-06 22:39:42] Set ATHENA_CORE_NUMBER=4
[2025-10-06 22:39:42] Starting ATLAS job with PandaID=6832976539
[2025-10-06 22:39:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 02:24:28]  *** The last 200 lines of the pilot log: ***
[2025-10-07 02:24:28] 2025-10-07 06:23:20,561 | INFO     | time since job start (13399s) is within the limit (172800.0s)
[2025-10-07 02:24:28] 2025-10-07 06:23:22,566 | INFO     | time since job start (13401s) is within the limit (172800.0s)
[2025-10-07 02:24:28] 2025-10-07 06:23:22,836 | INFO     | monitor loop #998: job 0:6832976539 is in state 'finished'
[2025-10-07 02:24:28] 2025-10-07 06:23:22,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 02:24:28] 2025-10-07 06:23:24,121 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 02:24:28] 2025-10-07 06:23:24,122 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3101.48425
[2025-10-07 02:24:28] 2025-10-07 06:23:24,123 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6832976539/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 02:24:28] 2025-10-07 06:23:24,123 | INFO     | extracted standard info from prmon json
[2025-10-07 02:24:28] 2025-10-07 06:23:24,123 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 02:24:28] 2025-10-07 06:23:24,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 02:24:28] 2025-10-07 06:23:24,124 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 02:24:28] 2025-10-07 06:23:24,124 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 02:24:28] 2025-10-07 06:23:24,126 | INFO     | fitting pss+swap vs Time
[2025-10-07 02:24:28] 2025-10-07 06:23:24,126 | INFO     | sum of square deviations: 3256879670.0
[2025-10-07 02:24:28] 2025-10-07 06:23:24,127 | INFO     | sum of deviations: -56698809479.99999
[2025-10-07 02:24:28] 2025-10-07 06:23:24,127 | INFO     | mean x: 1759811473.0
[2025-10-07 02:24:28] 2025-10-07 06:23:24,127 | INFO     | mean y: 2412241.8812785386
[2025-10-07 02:24:28] 2025-10-07 06:23:24,127 | INFO     | -- intersect: 30638857409.763443
[2025-10-07 02:24:28] 2025-10-07 06:23:24,127 | INFO     | intersect: 30638857409.763443
[2025-10-07 02:24:28] 2025-10-07 06:23:24,127 | INFO     | chi2: 1.7889210681125387
[2025-10-07 02:24:28] 2025-10-07 06:23:24,127 | INFO     | sum of square deviations: 3038856977.5
[2025-10-07 02:24:28] 2025-10-07 06:23:24,128 | INFO     | sum of deviations: -54970800656.50001
[2025-10-07 02:24:28] 2025-10-07 06:23:24,128 | INFO     | mean x: 1759811320.5
[2025-10-07 02:24:28] 2025-10-07 06:23:24,128 | INFO     | mean y: 2413450.808411215
[2025-10-07 02:24:28] 2025-10-07 06:23:24,128 | INFO     | -- intersect: 31836171343.50198
[2025-10-07 02:24:28] 2025-10-07 06:23:24,128 | INFO     | intersect: 31836171343.50198
[2025-10-07 02:24:28] 2025-10-07 06:23:24,128 | INFO     | chi2: 1.7817448512560277
[2025-10-07 02:24:28] 2025-10-07 06:23:24,128 | INFO     | current chi2=1.7817448512560277 (change=0.40114776355574766 %)
[2025-10-07 02:24:28] 2025-10-07 06:23:24,128 | INFO     | right removable region: 213
[2025-10-07 02:24:28] 2025-10-07 06:23:24,129 | INFO     | sum of square deviations: 3038856977.5
[2025-10-07 02:24:28] 2025-10-07 06:23:24,129 | INFO     | sum of deviations: -80438196651.5
[2025-10-07 02:24:28] 2025-10-07 06:23:24,129 | INFO     | mean x: 1759811625.5
[2025-10-07 02:24:28] 2025-10-07 06:23:24,129 | INFO     | mean y: 2428572.9392523365
[2025-10-07 02:24:28] 2025-10-07 06:23:24,129 | INFO     | -- intersect: 46584441036.72421
[2025-10-07 02:24:28] 2025-10-07 06:23:24,130 | INFO     | intersect: 46584441036.72421
[2025-10-07 02:24:28] 2025-10-07 06:23:24,130 | INFO     | chi2: 0.45424952731014545
[2025-10-07 02:24:28] 2025-10-07 06:23:24,130 | INFO     | current chi2=0.45424952731014545 (change=74.60762604862066 %)
[2025-10-07 02:24:28] 2025-10-07 06:23:24,130 | INFO     | sum of square deviations: 2830787960.0
[2025-10-07 02:24:28] 2025-10-07 06:23:24,131 | INFO     | sum of deviations: -70823615984.99998
[2025-10-07 02:24:28] 2025-10-07 06:23:24,131 | INFO     | mean x: 1759811778.0
[2025-10-07 02:24:28] 2025-10-07 06:23:24,131 | INFO     | mean y: 2421522.5071770335
[2025-10-07 02:24:28] 2025-10-07 06:23:24,131 | INFO     | -- intersect: 44031234465.08874
[2025-10-07 02:24:28] 2025-10-07 06:23:24,131 | INFO     | intersect: 44031234465.08874
[2025-10-07 02:24:28] 2025-10-07 06:23:24,131 | INFO     | chi2: 0.44170236139195057
[2025-10-07 02:24:28] 2025-10-07 06:23:24,131 | INFO     | current chi2=0.44170236139195057 (change=2.7621747880495033 %)
[2025-10-07 02:24:28] 2025-10-07 06:23:24,131 | INFO     | left removable region: 20
[2025-10-07 02:24:28] 2025-10-07 06:23:24,131 | INFO     | sum of square deviations: 2229146912.0
[2025-10-07 02:24:28] 2025-10-07 06:23:24,132 | INFO     | sum of deviations: -48138034893.00001
[2025-10-07 02:24:28] 2025-10-07 06:23:24,132 | INFO     | mean x: 1759811900.0
[2025-10-07 02:24:28] 2025-10-07 06:23:24,132 | INFO     | mean y: 2406282.652849741
[2025-10-07 02:24:28] 2025-10-07 06:23:24,132 | INFO     | -- intersect: 38005234266.43566
[2025-10-07 02:24:28] 2025-10-07 06:23:24,132 | INFO     | intersect: 38005234266.43566
[2025-10-07 02:24:28] 2025-10-07 06:23:24,132 | INFO     | chi2: 0.37829287279768264
[2025-10-07 02:24:28] 2025-10-07 06:23:24,132 | INFO     | -- intersect: 38005234266.43566
[2025-10-07 02:24:28] 2025-10-07 06:23:24,132 | INFO     | current memory leak: -21.59 B/s (using 193 data points, chi2=0.38)
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | could have reported an average CPU frequency of 2845 MHz (11 samples)
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | ..............................
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | . Timing measurements:
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | . get job = 0 s
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | . initial setup = 7 s
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | . payload setup = 4 s
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | . stage-in = 0 s
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | . payload execution = 13362 s
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | . stage-out = 5 s
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | . log creation = 0 s
[2025-10-07 02:24:28] 2025-10-07 06:23:24,133 | INFO     | ..............................
[2025-10-07 02:24:28] 2025-10-07 06:23:24,179 | INFO     | 
[2025-10-07 02:24:28] 2025-10-07 06:23:24,179 | INFO     | job summary report
[2025-10-07 02:24:28] 2025-10-07 06:23:24,179 | INFO     | --------------------------------------------------
[2025-10-07 02:24:28] 2025-10-07 06:23:24,179 | INFO     | PanDA job id: 6832976539
[2025-10-07 02:24:28] 2025-10-07 06:23:24,179 | INFO     | task id: 46376905
[2025-10-07 02:24:28] 2025-10-07 06:23:24,179 | INFO     | errors: (none)
[2025-10-07 02:24:28] 2025-10-07 06:23:24,179 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 02:24:28] 2025-10-07 06:23:24,179 | INFO     | pilot state: finished 
[2025-10-07 02:24:28] 2025-10-07 06:23:24,179 | INFO     | transexitcode: 0
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | exeerrorcode: 0
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | exeerrordiag: 
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | exitcode: 0
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | exitmsg: OK
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | cpuconsumptiontime: 38641 s
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | nevents: 400
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | neventsw: 0
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | pid: 827955
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | pgrp: 827955
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | corecount: 4
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | event service: False
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | sizes: {0: 2348820, 3: 2349082, 11: 2349110, 13369: 2379398, 13375: 2388396, 13377: 2388452, 13389: 2388774}
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | --------------------------------------------------
[2025-10-07 02:24:28] 2025-10-07 06:23:24,180 | INFO     | 
[2025-10-07 02:24:28] 2025-10-07 06:23:24,181 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-07 02:24:28] 2025-10-07 06:23:24,194 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 02:24:28] 2025-10-07 06:23:24,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,196 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 02:24:28] 2025-10-07 06:23:24,196 | INFO     | job 6832976539 has completed (purged errors)
[2025-10-07 02:24:28] 2025-10-07 06:23:24,196 | INFO     | overall cleanup function is called
[2025-10-07 02:24:28] 2025-10-07 06:23:25,202 | INFO     | --- collectZombieJob: --- 10, [827955]
[2025-10-07 02:24:28] 2025-10-07 06:23:25,203 | INFO     | zombie collector waiting for pid 827955
[2025-10-07 02:24:28] 2025-10-07 06:23:25,203 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 02:24:28] 2025-10-07 06:23:25,203 | INFO     | collected zombie processes
[2025-10-07 02:24:28] 2025-10-07 06:23:25,203 | INFO     | will attempt to kill all subprocesses of pid=827955
[2025-10-07 02:24:28] 2025-10-07 06:23:25,255 | INFO     | process IDs to be killed: [827955] (in reverse order)
[2025-10-07 02:24:28] 2025-10-07 06:23:25,282 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 02:24:28] 2025-10-07 06:23:25,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 02:24:28] 2025-10-07 06:23:25,285 | INFO     | did not find any defunct processes belonging to 827955
[2025-10-07 02:24:28] 2025-10-07 06:23:25,287 | INFO     | did not find any defunct processes belonging to 827955
[2025-10-07 02:24:28] 2025-10-07 06:23:25,287 | INFO     | ready for new job
[2025-10-07 02:24:28] 2025-10-07 06:23:25,287 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 02:24:28] 2025-10-07 06:23:25,288 | INFO     | ***************************************
[2025-10-07 02:24:28] 2025-10-07 06:23:25,288 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 02:24:28] 2025-10-07 06:23:25,288 | INFO     | ***************************************
[2025-10-07 02:24:28] 2025-10-07 06:23:25,288 | INFO     | 
[2025-10-07 02:24:28] 2025-10-07 06:23:25,289 | INFO     | architecture information:
[2025-10-07 02:24:28] 2025-10-07 06:23:25,289 | INFO     | executing command: cat /etc/os-release
[2025-10-07 02:24:28] 2025-10-07 06:23:25,299 | INFO     | cat /etc/os-release:
[2025-10-07 02:24:28] NAME="CentOS Linux"
[2025-10-07 02:24:28] VERSION="7 (Core)"
[2025-10-07 02:24:28] ID="centos"
[2025-10-07 02:24:28] ID_LIKE="rhel fedora"
[2025-10-07 02:24:28] VERSION_ID="7"
[2025-10-07 02:24:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 02:24:28] ANSI_COLOR="0;31"
[2025-10-07 02:24:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 02:24:28] HOME_URL="https://www.centos.org/"
[2025-10-07 02:24:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 02:24:28] 
[2025-10-07 02:24:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 02:24:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 02:24:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 02:24:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 02:24:28] 
[2025-10-07 02:24:28] 2025-10-07 06:23:25,299 | INFO     | ***************************************
[2025-10-07 02:24:28] 2025-10-07 06:23:25,802 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-07 02:24:28] 2025-10-07 06:23:25,812 | INFO     | sufficient remaining disk space (341562097664 B)
[2025-10-07 02:24:28] 2025-10-07 06:23:25,812 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 02:24:28] 2025-10-07 06:23:25,812 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 02:24:28] 2025-10-07 06:23:25,813 | INFO     | update_server=False
[2025-10-07 02:24:28] 2025-10-07 06:23:25,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 02:24:28] 2025-10-07 06:23:25,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 02:24:28] 2025-10-07 06:23:26,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 02:24:28] 2025-10-07 06:23:26,274 | INFO     | all data control threads have been joined
[2025-10-07 02:24:28] 2025-10-07 06:23:26,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 02:24:28] 2025-10-07 06:23:26,345 | INFO     | aborting loop
[2025-10-07 02:24:28] 2025-10-07 06:23:26,818 | INFO     | [job] queue monitor thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:26,818 | INFO     | [job] retrieve thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:26,827 | INFO     | all job control threads have been joined
[2025-10-07 02:24:28] 2025-10-07 06:23:26,951 | INFO     | all payload control threads have been joined
[2025-10-07 02:24:28] 2025-10-07 06:23:27,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 02:24:28] 2025-10-07 06:23:27,279 | INFO     | [data] control thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:27,326 | INFO     | [payload] failed_post thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:27,350 | INFO     | [job] job monitor thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:27,510 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:27,545 | INFO     | [job] validate thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:27,647 | INFO     | [data] copytool_in thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:27,665 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:27,833 | INFO     | [job] control thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:27,957 | INFO     | [payload] control thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:28,039 | INFO     | [data] copytool_out thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:28,086 | INFO     | [payload] validate_post thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:28,151 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:28,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:31,174 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 02:24:28] 2025-10-07 06:23:55,699 | INFO     | PID=821577 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 02:24:28] 2025-10-07 06:23:55,699 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 02:24:28] 2025-10-07 06:23:55,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 02:24:28] 2025-10-07 06:23:55,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 02:24:28] 2025-10-07 06:24:23,081 | INFO     | [monitor] cgroup control has ended
[2025-10-07 02:24:28] 2025-10-07 06:24:23,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140593310029632)>', '<ExcThread(monitor, started 140592600315648)>']
[2025-10-07 02:24:28] 2025-10-07 06:24:23,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 02:24:28] 2025-10-07 06:24:23,835 | INFO     | [monitor] control thread has ended
[2025-10-07 02:24:28] 2025-10-07 06:24:28,406 | INFO     | all workflow threads have been joined
[2025-10-07 02:24:28] 2025-10-07 06:24:28,407 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 02:24:28] 2025-10-07 06:24:28,407 | INFO     | traces error code: 0
[2025-10-07 02:24:28] 2025-10-07 06:24:28,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 02:24:28] 2025-10-07 06:24:28,481 [wrapper] ==== pilot stdout END ====
[2025-10-07 02:24:28] 2025-10-07 06:24:28,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 02:24:28] 2025-10-07 06:24:28,485 [wrapper] pilotpid: 821577
[2025-10-07 02:24:28] 2025-10-07 06:24:28,487 [wrapper] Pilot exit status: 0
[2025-10-07 02:24:28] 2025-10-07 06:24:28,496 [wrapper] pandaids: 6832976539
[2025-10-07 02:24:28] 2025-10-07 06:24:28,515 [wrapper] cleanup supervisor_pilot  849593 821578
[2025-10-07 02:24:28] 2025-10-07 06:24:28,518 [wrapper] Test setup, not cleaning
[2025-10-07 02:24:28] 2025-10-07 06:24:28,520 [wrapper] apfmon messages muted
[2025-10-07 02:24:28] 2025-10-07 06:24:28,522 [wrapper] ==== wrapper stdout END ====
[2025-10-07 02:24:28] 2025-10-07 06:24:28,524 [wrapper] ==== wrapper stderr END ====
[2025-10-07 02:24:28]  *** Error codes and diagnostics ***
[2025-10-07 02:24:28]     "exeErrorCode": 0,
[2025-10-07 02:24:28]     "exeErrorDiag": "",
[2025-10-07 02:24:28]     "pilotErrorCode": 0,
[2025-10-07 02:24:28]     "pilotErrorDiag": "",
[2025-10-07 02:24:28]  *** Listing of results directory ***
[2025-10-07 02:24:28] total 394384
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc    552446 Oct  6 18:09 pilot3.tar.gz
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc      5112 Oct  6 18:46 queuedata.json
[2025-10-07 02:24:28] -rwx------. 1 boinc boinc     36292 Oct  6 18:47 runpilot2-wrapper.sh
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc       100 Oct  6 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 02:24:28] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 22:39 run_atlas
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc       105 Oct  6 22:39 job.xml
[2025-10-07 02:24:28] -rw-r--r--. 2 boinc boinc 214702421 Oct  6 22:39 EVNT.46376901._004511.pool.root.1
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc      6745 Oct  6 22:39 init_data.xml
[2025-10-07 02:24:28] drwxrwx--x. 2 boinc boinc      4096 Oct  6 22:39 shared
[2025-10-07 02:24:28] -rw-r--r--. 2 boinc boinc    565606 Oct  6 22:39 input.tar.gz
[2025-10-07 02:24:28] -rw-r--r--. 2 boinc boinc     15120 Oct  6 22:39 start_atlas.sh
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc         0 Oct  6 22:39 boinc_lockfile
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc      2521 Oct  6 22:39 pandaJob.out
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc    974984 Oct  6 22:39 agis_schedconf.cvmfs.json
[2025-10-07 02:24:28] drwx------. 4 boinc boinc      4096 Oct  6 22:40 pilot3
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc 180790945 Oct  7 02:22 HITS.46376905._121522.pool.root.1
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc       530 Oct  7 02:22 boinc_task_state.xml
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc        95 Oct  7 02:23 pilot_heartbeat.json
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc      1015 Oct  7 02:23 memory_monitor_summary.json
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc   1560401 Oct  7 02:23 agis_ddmendpoints.agis.ALL.json
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc    383970 Oct  7 02:23 log.46376905._121522.job.log.tgz.1
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc      7763 Oct  7 02:23 heartbeat.json
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc      8192 Oct  7 02:24 boinc_mmap_file
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc        28 Oct  7 02:24 wrapper_checkpoint.txt
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc      4748 Oct  7 02:24 pilotlog.txt
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc   1850233 Oct  7 02:24 log.46376905._121522.job.log.1
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc       357 Oct  7 02:24 output.list
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc       620 Oct  7 02:24 runtime_log
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc   2252800 Oct  7 02:24 result.tar.gz
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc      8659 Oct  7 02:24 runtime_log.err
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc       648 Oct  7 02:24 052MDmtA9P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDma2UNDmibpi7m.diag
[2025-10-07 02:24:28] -rw-r--r--. 1 boinc boinc     21168 Oct  7 02:24 stderr.txt
[2025-10-07 02:24:28] HITS file was successfully produced:
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc 180790945 Oct  7 02:22 shared/HITS.pool.root.1
[2025-10-07 02:24:28]  *** Contents of shared directory: ***
[2025-10-07 02:24:28] total 389008
[2025-10-07 02:24:28] -rw-r--r--. 2 boinc boinc 214702421 Oct  6 22:39 ATLAS.root_0
[2025-10-07 02:24:28] -rw-r--r--. 2 boinc boinc    565606 Oct  6 22:39 input.tar.gz
[2025-10-07 02:24:28] -rw-r--r--. 2 boinc boinc     15120 Oct  6 22:39 start_atlas.sh
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc 180790945 Oct  7 02:22 HITS.pool.root.1
[2025-10-07 02:24:28] -rw-------. 1 boinc boinc   2252800 Oct  7 02:24 result.tar.gz
02:24:30 (817329): run_atlas exited; CPU time 38784.847884
02:24:30 (817329): called boinc_finish(0)

</stderr_txt>
]]>

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