Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
05:28:41 (11000): wrapper (7.7.26015): starting
05:28:41 (11000): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 05:28:41] Arguments: --nthreads 8
[2025-10-07 05:28:41] Threads: 8
[2025-10-07 05:28:41] Checking for CVMFS
[2025-10-07 05:28:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 05:28:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 05:28:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 05:28:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 05:28:41] 2.11.0.0 5498 11090 61708 151422 1 186 3946650 4096001 668 130560 0 574122 98.815 976357 243 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-07 05:28:41] CVMFS is ok
[2025-10-07 05:28:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 05:28:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 05:28:41] Further information can be found at the LHC@home message board.
[2025-10-07 05:28:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 05:28:41] Checking for apptainer binary...
[2025-10-07 05:28:41] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-07 05:28:41] apptainer is not installed, using version from CVMFS
[2025-10-07 05:28:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 05:28:41] WARNING: Environment variable TMPDIR already has value [/tmp/job_10287872/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node292
[2025-10-07 05:28:41] apptainer works
[2025-10-07 05:28:41] Set ATHENA_PROC_NUMBER=8
[2025-10-07 05:28:41] Set ATHENA_CORE_NUMBER=8
[2025-10-07 05:28:41] Starting ATLAS job with PandaID=6830135322
[2025-10-07 05:28:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10287872/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 06:13:12]  *** The last 200 lines of the pilot log: ***
[2025-10-07 06:13:12]  mtime=0
[2025-10-07 06:13:12]  protocol_id=None
[2025-10-07 06:13:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-07 06:13:12]  replicas=None
[2025-10-07 06:13:12]  scope=mc23_13p6TeV
[2025-10-07 06:13:12]  status=None
[2025-10-07 06:13:12]  status_code=0
[2025-10-07 06:13:12]  storage_token=
[2025-10-07 06:13:12]  surl=/tmp/job_10287872/atlas/pilot/slots/0/PanDA_Pilot-6830135322/log.46376905._065617.job.log.tgz.1
[2025-10-07 06:13:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/e4/log.46376905._065617.job.log.tgz.1
[2025-10-07 06:13:12]  workdir=None
[2025-10-07 06:13:12] ]
[2025-10-07 06:13:12] 2025-10-07 04:12:36,641 | INFO     | transferring file log.46376905._065617.job.log.tgz.1 from /tmp/job_10287872/atlas/pilot/slots/0/PanDA_Pilot-6830135322/log.46376905._065617.job.log.tgz.1 to /tmp/j
[2025-10-07 06:13:12] 2025-10-07 04:12:36,641 | INFO     | executing command: /usr/bin/env mv /tmp/job_10287872/atlas/pilot/slots/0/PanDA_Pilot-6830135322/log.46376905._065617.job.log.tgz.1 /tmp/job_10287872/atlas/pilot/sl
[2025-10-07 06:13:12] 2025-10-07 04:12:36,649 | INFO     | adding to output.list: log.46376905._065617.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/e4/log.46376905._065617.job.log.tg
[2025-10-07 06:13:12] 2025-10-07 04:12:36,649 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 06:13:12] 2025-10-07 04:12:36,649 | INFO     | summary of transferred files:
[2025-10-07 06:13:12] 2025-10-07 04:12:36,649 | INFO     |  -- lfn=log.46376905._065617.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 06:13:12] 2025-10-07 04:12:36,649 | INFO     | stage-out finished correctly
[2025-10-07 06:13:12] 2025-10-07 04:12:36,700 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 06:13:12] 2025-10-07 04:12:37,078 | INFO     | time since job start (2631s) is within the limit (172800.0s)
[2025-10-07 06:13:12] 2025-10-07 04:12:38,435 | INFO     | monitor loop #197: job 0:6830135322 is in state 'finished'
[2025-10-07 06:13:12] 2025-10-07 04:12:38,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:13:12] 2025-10-07 04:12:38,921 | INFO     | job 6830135322 has state=finished
[2025-10-07 06:13:12] 2025-10-07 04:12:38,921 | INFO     | preparing for final server update for job 6830135322 in state='finished'
[2025-10-07 06:13:12] 2025-10-07 04:12:38,921 | INFO     | this job has now completed (state=finished)
[2025-10-07 06:13:12] 2025-10-07 04:12:38,921 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 06:13:12] 2025-10-07 04:12:38,921 | INFO     | log transfer has been attempted: DONE
[2025-10-07 06:13:12] 2025-10-07 04:12:38,921 | INFO     | job 6830135322 has finished - writing final server update
[2025-10-07 06:13:12] 2025-10-07 04:12:38,922 | INFO     | total number of processed events: 400 (read)
[2025-10-07 06:13:12] 2025-10-07 04:12:38,922 | INFO     | executing command: lscpu
[2025-10-07 06:13:12] 2025-10-07 04:12:38,953 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 06:13:12] 2025-10-07 04:12:39,083 | INFO     | time since job start (2633s) is within the limit (172800.0s)
[2025-10-07 06:13:12] 2025-10-07 04:12:40,222 | INFO     | PID=15669 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 06:13:12] 2025-10-07 04:12:40,223 | INFO     | .. there are 5 such processes running
[2025-10-07 06:13:12] 2025-10-07 04:12:40,593 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 06:13:12] 2025-10-07 04:12:40,598 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2502.8342031250004
[2025-10-07 06:13:12] 2025-10-07 04:12:40,603 | INFO     | using path: /tmp/job_10287872/atlas/pilot/slots/0/PanDA_Pilot-6830135322/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 06:13:12] 2025-10-07 04:12:40,603 | INFO     | extracted standard info from prmon json
[2025-10-07 06:13:12] 2025-10-07 04:12:40,603 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 06:13:12] 2025-10-07 04:12:40,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 06:13:12] 2025-10-07 04:12:40,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 06:13:12] 2025-10-07 04:12:40,603 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | fitting pss+swap vs Time
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | sum of square deviations: 14456085.0
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | sum of deviations: 66446507.00000008
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | mean x: 1759809115.5
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | mean y: 2544858.8333333335
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | -- intersect: -8086309676.245474
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | intersect: -8086309676.245474
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | chi2: 0.0013693138880399626
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | -- intersect: -8086309676.245474
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | current memory leak: 4.60 B/s (using 36 data points, chi2=0.00)
[2025-10-07 06:13:12] 2025-10-07 04:12:40,604 | INFO     | could have reported an average CPU frequency of 2585 MHz (5 samples)
[2025-10-07 06:13:12] 2025-10-07 04:12:40,605 | INFO     | ..............................
[2025-10-07 06:13:12] 2025-10-07 04:12:40,605 | INFO     | . Timing measurements:
[2025-10-07 06:13:12] 2025-10-07 04:12:40,605 | INFO     | . get job = 0 s
[2025-10-07 06:13:12] 2025-10-07 04:12:40,605 | INFO     | . initial setup = 1 s
[2025-10-07 06:13:12] 2025-10-07 04:12:40,605 | INFO     | . payload setup = 2 s
[2025-10-07 06:13:12] 2025-10-07 04:12:40,605 | INFO     | . stage-in = 0 s
[2025-10-07 06:13:12] 2025-10-07 04:12:40,605 | INFO     | . payload execution = 2611 s
[2025-10-07 06:13:12] 2025-10-07 04:12:40,605 | INFO     | . stage-out = 0 s
[2025-10-07 06:13:12] 2025-10-07 04:12:40,605 | INFO     | . log creation = 0 s
[2025-10-07 06:13:12] 2025-10-07 04:12:40,605 | INFO     | ..............................
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | 
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | job summary report
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | --------------------------------------------------
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | PanDA job id: 6830135322
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | task id: 46376905
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | errors: (none)
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | pilot state: finished 
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | transexitcode: 0
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | exeerrorcode: 0
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | exeerrordiag: 
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | exitcode: 0
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | exitmsg: OK
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | cpuconsumptiontime: 18909 s
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | nevents: 400
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | neventsw: 0
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | pid: 5216
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | pgrp: 5216
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | corecount: 8
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | event service: False
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | sizes: {0: 2348940, 2: 2349202, 11: 2349230, 2617: 2383596, 2621: 2383766}
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | --------------------------------------------------
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | 
[2025-10-07 06:13:12] 2025-10-07 04:12:40,655 | INFO     | executing command: ls -lF /tmp/job_10287872/atlas/pilot/slots/0
[2025-10-07 06:13:12] 2025-10-07 04:12:40,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | job 6830135322 has completed (purged errors)
[2025-10-07 06:13:12] 2025-10-07 04:12:40,665 | INFO     | overall cleanup function is called
[2025-10-07 06:13:12] 2025-10-07 04:12:41,671 | INFO     | --- collectZombieJob: --- 10, [5216]
[2025-10-07 06:13:12] 2025-10-07 04:12:41,671 | INFO     | zombie collector waiting for pid 5216
[2025-10-07 06:13:12] 2025-10-07 04:12:41,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 06:13:12] 2025-10-07 04:12:41,671 | INFO     | collected zombie processes
[2025-10-07 06:13:12] 2025-10-07 04:12:41,671 | INFO     | will attempt to kill all subprocesses of pid=5216
[2025-10-07 06:13:12] 2025-10-07 04:12:41,777 | INFO     | process IDs to be killed: [5216] (in reverse order)
[2025-10-07 06:13:12] 2025-10-07 04:12:41,815 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 06:13:12] 2025-10-07 04:12:41,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 06:13:12] 2025-10-07 04:12:41,819 | INFO     | did not find any defunct processes belonging to 5216
[2025-10-07 06:13:12] 2025-10-07 04:12:41,822 | INFO     | did not find any defunct processes belonging to 5216
[2025-10-07 06:13:12] 2025-10-07 04:12:41,822 | INFO     | ready for new job
[2025-10-07 06:13:12] 2025-10-07 04:12:41,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 06:13:12] 2025-10-07 04:12:41,823 | INFO     | ***************************************
[2025-10-07 06:13:12] 2025-10-07 04:12:41,823 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 06:13:12] 2025-10-07 04:12:41,823 | INFO     | ***************************************
[2025-10-07 06:13:12] 2025-10-07 04:12:41,823 | INFO     | 
[2025-10-07 06:13:12] 2025-10-07 04:12:41,838 | INFO     | architecture information:
[2025-10-07 06:13:12] 2025-10-07 04:12:41,838 | INFO     | executing command: cat /etc/os-release
[2025-10-07 06:13:12] 2025-10-07 04:12:41,844 | INFO     | cat /etc/os-release:
[2025-10-07 06:13:12] NAME="CentOS Linux"
[2025-10-07 06:13:12] VERSION="7 (Core)"
[2025-10-07 06:13:12] ID="centos"
[2025-10-07 06:13:12] ID_LIKE="rhel fedora"
[2025-10-07 06:13:12] VERSION_ID="7"
[2025-10-07 06:13:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 06:13:12] ANSI_COLOR="0;31"
[2025-10-07 06:13:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 06:13:12] HOME_URL="https://www.centos.org/"
[2025-10-07 06:13:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 06:13:12] 
[2025-10-07 06:13:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 06:13:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 06:13:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 06:13:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 06:13:12] 
[2025-10-07 06:13:12] 2025-10-07 04:12:41,844 | INFO     | ***************************************
[2025-10-07 06:13:12] 2025-10-07 04:12:42,347 | INFO     | executing command: df -mP /tmp/job_10287872/atlas/pilot/slots/0
[2025-10-07 06:13:12] 2025-10-07 04:12:42,353 | INFO     | sufficient remaining disk space (223573180416 B)
[2025-10-07 06:13:12] 2025-10-07 04:12:42,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 06:13:12] 2025-10-07 04:12:42,354 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 06:13:12] 2025-10-07 04:12:42,354 | INFO     | update_server=False
[2025-10-07 06:13:12] 2025-10-07 04:12:42,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 06:13:12] 2025-10-07 04:12:42,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 06:13:12] 2025-10-07 04:12:42,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 06:13:12] 2025-10-07 04:12:42,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 06:13:12] 2025-10-07 04:12:42,354 | INFO     | aborting loop
[2025-10-07 06:13:12] 2025-10-07 04:12:42,622 | INFO     | all job control threads have been joined
[2025-10-07 06:13:12] 2025-10-07 04:12:42,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 06:13:12] 2025-10-07 04:12:43,145 | INFO     | all data control threads have been joined
[2025-10-07 06:13:12] 2025-10-07 04:12:43,359 | INFO     | [job] retrieve thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:43,359 | INFO     | [job] queue monitor thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:43,359 | INFO     | [job] job monitor thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:43,520 | INFO     | [data] copytool_in thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:43,627 | INFO     | [job] control thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:43,670 | INFO     | all payload control threads have been joined
[2025-10-07 06:13:12] 2025-10-07 04:12:43,699 | INFO     | [payload] validate_post thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:44,151 | INFO     | [data] control thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:44,359 | INFO     | [data] copytool_out thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:44,475 | INFO     | [job] validate thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:44,623 | INFO     | [payload] failed_post thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:44,675 | INFO     | [payload] control thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:44,684 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:44,705 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:44,756 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:46,757 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:49,961 | INFO     | [monitor] cgroup control has ended
[2025-10-07 06:13:12] 2025-10-07 04:12:52,849 | INFO     | job.realtimelogging is not enabled
[2025-10-07 06:13:12] 2025-10-07 04:12:53,854 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 06:13:12] 2025-10-07 04:12:54,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456064747264)>']
[2025-10-07 06:13:12] 2025-10-07 04:12:59,162 | INFO     | all workflow threads have been joined
[2025-10-07 06:13:12] 2025-10-07 04:12:59,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 06:13:12] 2025-10-07 04:12:59,162 | INFO     | traces error code: 0
[2025-10-07 06:13:12] 2025-10-07 04:12:59,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 06:13:12] 2025-10-07 04:13:12,404 | INFO     | PID=15669 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 06:13:12] 2025-10-07 04:13:12,404 | INFO     | .. there are 4 such processes running
[2025-10-07 06:13:12] 2025-10-07 04:13:12,404 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 06:13:12] 2025-10-07 04:13:12,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 06:13:12] 2025-10-07 04:13:12,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 06:13:12] 2025-10-07 04:13:12,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 06:13:12] 2025-10-07 04:13:12,404 | INFO     | [monitor] control thread has ended
[2025-10-07 06:13:12] 2025-10-07 04:13:12,457 [wrapper] ==== pilot stdout END ====
[2025-10-07 06:13:12] 2025-10-07 04:13:12,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 06:13:12] 2025-10-07 04:13:12,460 [wrapper] pilotpid: 15669
[2025-10-07 06:13:12] 2025-10-07 04:13:12,461 [wrapper] Pilot exit status: 0
[2025-10-07 06:13:12] 2025-10-07 04:13:12,465 [wrapper] pandaids: 6830135322
[2025-10-07 06:13:12] 2025-10-07 04:13:12,487 [wrapper] cleanup supervisor_pilot 31674 15670
[2025-10-07 06:13:12] 2025-10-07 04:13:12,488 [wrapper] Test setup, not cleaning
[2025-10-07 06:13:12] 2025-10-07 04:13:12,489 [wrapper] apfmon messages muted
[2025-10-07 06:13:12] 2025-10-07 04:13:12,490 [wrapper] ==== wrapper stdout END ====
[2025-10-07 06:13:12] 2025-10-07 04:13:12,491 [wrapper] ==== wrapper stderr END ====
[2025-10-07 06:13:12]  *** Error codes and diagnostics ***
[2025-10-07 06:13:12]     "exeErrorCode": 0,
[2025-10-07 06:13:12]     "exeErrorDiag": "",
[2025-10-07 06:13:12]     "pilotErrorCode": 0,
[2025-10-07 06:13:12]     "pilotErrorDiag": "",
[2025-10-07 06:13:12]  *** Listing of results directory ***
[2025-10-07 06:13:12] total 392092
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user    552446 Oct  4 20:53 pilot3.tar.gz
[2025-10-07 06:13:12] -rwx------ 1 mf493845 unix-user     36292 Oct  4 20:54 runpilot2-wrapper.sh
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user      5112 Oct  4 20:54 queuedata.json
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user       100 Oct  7 04:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 06:13:12] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct  7 04:34 run_atlas
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user       105 Oct  7 04:34 job.xml
[2025-10-07 06:13:12] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  7 05:28 start_atlas.sh
[2025-10-07 06:13:12] drwxrwx--x 2 mf493845 unix-user       100 Oct  7 05:28 shared
[2025-10-07 06:13:12] -rw-r--r-- 2 mf493845 unix-user    565590 Oct  7 05:28 input.tar.gz
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user      6388 Oct  7 05:28 init_data.xml
[2025-10-07 06:13:12] -rw-r--r-- 2 mf493845 unix-user 213452029 Oct  7 05:28 EVNT.46376901._002376.pool.root.1
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user         0 Oct  7 05:28 boinc_setup_complete
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user      8192 Oct  7 05:28 boinc_mmap_file
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user         0 Oct  7 05:28 boinc_lockfile
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user      2518 Oct  7 05:28 pandaJob.out
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user    974984 Oct  7 05:28 agis_schedconf.cvmfs.json
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user   1560401 Oct  7 05:28 agis_ddmendpoints.agis.ALL.json
[2025-10-07 06:13:12] drwx------ 4 mf493845 unix-user       400 Oct  7 05:28 pilot3
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user 182772476 Oct  7 06:12 HITS.46376905._065617.pool.root.1
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user        95 Oct  7 06:12 pilot_heartbeat.json
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user      1010 Oct  7 06:12 memory_monitor_summary.json
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user    282972 Oct  7 06:12 log.46376905._065617.job.log.tgz.1
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user      7758 Oct  7 06:12 heartbeat.json
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user       820 Oct  7 06:13 pilotlog.txt
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user    423422 Oct  7 06:13 log.46376905._065617.job.log.1
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user       357 Oct  7 06:13 output.list
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user       620 Oct  7 06:13 runtime_log
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user    727040 Oct  7 06:13 result.tar.gz
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user      9076 Oct  7 06:13 runtime_log.err
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user       641 Oct  7 06:13 9QsLDmxZMP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqCEMDmsPDuLm.diag
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user     22166 Oct  7 06:13 stderr.txt
[2025-10-07 06:13:12] HITS file was successfully produced:
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user 182772476 Oct  7 06:12 shared/HITS.pool.root.1
[2025-10-07 06:13:12]  *** Contents of shared directory: ***
[2025-10-07 06:13:12] total 388228
[2025-10-07 06:13:12] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  7 05:28 start_atlas.sh
[2025-10-07 06:13:12] -rw-r--r-- 2 mf493845 unix-user    565590 Oct  7 05:28 input.tar.gz
[2025-10-07 06:13:12] -rw-r--r-- 2 mf493845 unix-user 213452029 Oct  7 05:28 ATLAS.root_0
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user 182772476 Oct  7 06:12 HITS.pool.root.1
[2025-10-07 06:13:12] -rw------- 1 mf493845 unix-user    727040 Oct  7 06:13 result.tar.gz
06:13:14 (11000): run_atlas exited; CPU time 18951.790190
06:13:14 (11000): called boinc_finish(0)

</stderr_txt>
]]>

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