Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
05:27:23 (19180): wrapper (7.7.26015): starting
05:27:23 (19180): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 05:27:23] Arguments: --nthreads 8
[2025-10-07 05:27:23] Threads: 8
[2025-10-07 05:27:23] Checking for CVMFS
[2025-10-07 05:27:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 05:27:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 05:27:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 05:27:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 05:27:24] 2.11.0.0 18677 26829 64112 151422 1 188 2971420 4096001 2698 130560 2 6405851 99.788 2047234 307 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-07 05:27:24] CVMFS is ok
[2025-10-07 05:27:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 05:27:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 05:27:24] Further information can be found at the LHC@home message board.
[2025-10-07 05:27:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 05:27:24] Checking for apptainer binary...
[2025-10-07 05:27:24] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-07 05:27:24] apptainer is not installed, using version from CVMFS
[2025-10-07 05:27:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 05:27:24] WARNING: Environment variable TMPDIR already has value [/tmp/job_10287793/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node015
[2025-10-07 05:27:24] apptainer works
[2025-10-07 05:27:24] Set ATHENA_PROC_NUMBER=8
[2025-10-07 05:27:24] Set ATHENA_CORE_NUMBER=8
[2025-10-07 05:27:24] Starting ATLAS job with PandaID=6830520203
[2025-10-07 05:27:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10287793/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 06:10:39]  *** The last 200 lines of the pilot log: ***
[2025-10-07 06:10:39]  mtime=0
[2025-10-07 06:10:39]  protocol_id=None
[2025-10-07 06:10:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-07 06:10:39]  replicas=None
[2025-10-07 06:10:39]  scope=mc23_13p6TeV
[2025-10-07 06:10:39]  status=None
[2025-10-07 06:10:39]  status_code=0
[2025-10-07 06:10:39]  storage_token=
[2025-10-07 06:10:39]  surl=/tmp/job_10287793/atlas/pilot/slots/0/PanDA_Pilot-6830520203/log.46376905._069795.job.log.tgz.1
[2025-10-07 06:10:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/d5/log.46376905._069795.job.log.tgz.1
[2025-10-07 06:10:39]  workdir=None
[2025-10-07 06:10:39] ]
[2025-10-07 06:10:39] 2025-10-07 04:09:41,512 | INFO     | transferring file log.46376905._069795.job.log.tgz.1 from /tmp/job_10287793/atlas/pilot/slots/0/PanDA_Pilot-6830520203/log.46376905._069795.job.log.tgz.1 to /tmp/j
[2025-10-07 06:10:39] 2025-10-07 04:09:41,512 | INFO     | executing command: /usr/bin/env mv /tmp/job_10287793/atlas/pilot/slots/0/PanDA_Pilot-6830520203/log.46376905._069795.job.log.tgz.1 /tmp/job_10287793/atlas/pilot/sl
[2025-10-07 06:10:39] 2025-10-07 04:09:41,518 | INFO     | time since job start (2532s) is within the limit (172800.0s)
[2025-10-07 06:10:39] 2025-10-07 04:09:41,520 | INFO     | adding to output.list: log.46376905._069795.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/d5/log.46376905._069795.job.log.tg
[2025-10-07 06:10:39] 2025-10-07 04:09:41,520 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 06:10:39] 2025-10-07 04:09:41,520 | INFO     | summary of transferred files:
[2025-10-07 06:10:39] 2025-10-07 04:09:41,520 | INFO     |  -- lfn=log.46376905._069795.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 06:10:39] 2025-10-07 04:09:41,521 | INFO     | stage-out finished correctly
[2025-10-07 06:10:39] 2025-10-07 04:09:43,480 | INFO     | monitor loop #192: job 0:6830520203 is in state 'finished'
[2025-10-07 06:10:39] 2025-10-07 04:09:43,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:10:39] 2025-10-07 04:09:43,523 | INFO     | time since job start (2534s) is within the limit (172800.0s)
[2025-10-07 06:10:39] 2025-10-07 04:09:44,466 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 06:10:39] 2025-10-07 04:09:45,255 | INFO     | job 6830520203 has state=finished
[2025-10-07 06:10:39] 2025-10-07 04:09:45,255 | INFO     | preparing for final server update for job 6830520203 in state='finished'
[2025-10-07 06:10:39] 2025-10-07 04:09:45,256 | INFO     | this job has now completed (state=finished)
[2025-10-07 06:10:39] 2025-10-07 04:09:45,256 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 06:10:39] 2025-10-07 04:09:45,256 | INFO     | log transfer has been attempted: DONE
[2025-10-07 06:10:39] 2025-10-07 04:09:45,256 | INFO     | job 6830520203 has finished - writing final server update
[2025-10-07 06:10:39] 2025-10-07 04:09:45,256 | INFO     | total number of processed events: 400 (read)
[2025-10-07 06:10:39] 2025-10-07 04:09:45,256 | INFO     | executing command: lscpu
[2025-10-07 06:10:39] 2025-10-07 04:09:45,288 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 06:10:39] 2025-10-07 04:09:45,526 | INFO     | time since job start (2536s) is within the limit (172800.0s)
[2025-10-07 06:10:39] 2025-10-07 04:09:45,987 | INFO     | monitor loop #193: job 0:6830520203 is in state 'finished'
[2025-10-07 06:10:39] 2025-10-07 04:09:45,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 06:10:39] 2025-10-07 04:09:47,090 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 06:10:39] 2025-10-07 04:09:47,094 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2365.4787968749997
[2025-10-07 06:10:39] 2025-10-07 04:09:47,099 | INFO     | using path: /tmp/job_10287793/atlas/pilot/slots/0/PanDA_Pilot-6830520203/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 06:10:39] 2025-10-07 04:09:47,100 | INFO     | extracted standard info from prmon json
[2025-10-07 06:10:39] 2025-10-07 04:09:47,100 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 06:10:39] 2025-10-07 04:09:47,100 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 06:10:39] 2025-10-07 04:09:47,100 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 06:10:39] 2025-10-07 04:09:47,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | fitting pss+swap vs Time
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | sum of square deviations: 13283970.0
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | sum of deviations: 660798726.0
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | mean x: 1759809008.0
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | mean y: 2674073.657142857
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | -- intersect: -87537387405.68402
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | intersect: -87537387405.68402
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | chi2: 0.012119738129930417
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | -- intersect: -87537387405.68402
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | current memory leak: 49.74 B/s (using 35 data points, chi2=0.01)
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | could have reported an average CPU frequency of 2584 MHz (5 samples)
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | ..............................
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | . Timing measurements:
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | . get job = 0 s
[2025-10-07 06:10:39] 2025-10-07 04:09:47,101 | INFO     | . initial setup = 1 s
[2025-10-07 06:10:39] 2025-10-07 04:09:47,102 | INFO     | . payload setup = 2 s
[2025-10-07 06:10:39] 2025-10-07 04:09:47,102 | INFO     | . stage-in = 0 s
[2025-10-07 06:10:39] 2025-10-07 04:09:47,102 | INFO     | . payload execution = 2514 s
[2025-10-07 06:10:39] 2025-10-07 04:09:47,102 | INFO     | . stage-out = 0 s
[2025-10-07 06:10:39] 2025-10-07 04:09:47,102 | INFO     | . log creation = 0 s
[2025-10-07 06:10:39] 2025-10-07 04:09:47,102 | INFO     | ..............................
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | 
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | job summary report
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | --------------------------------------------------
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | PanDA job id: 6830520203
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | task id: 46376905
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | errors: (none)
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | pilot state: finished 
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | transexitcode: 0
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | exeerrorcode: 0
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | exeerrordiag: 
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | exitcode: 0
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | exitmsg: OK
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | cpuconsumptiontime: 18012 s
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | nevents: 400
[2025-10-07 06:10:39] 2025-10-07 04:09:47,153 | INFO     | neventsw: 0
[2025-10-07 06:10:39] 2025-10-07 04:09:47,154 | INFO     | pid: 29550
[2025-10-07 06:10:39] 2025-10-07 04:09:47,154 | INFO     | pgrp: 29550
[2025-10-07 06:10:39] 2025-10-07 04:09:47,154 | INFO     | corecount: 8
[2025-10-07 06:10:39] 2025-10-07 04:09:47,154 | INFO     | event service: False
[2025-10-07 06:10:39] 2025-10-07 04:09:47,154 | INFO     | sizes: {0: 2348891, 2: 2349153, 10: 2349181, 2520: 2383493, 2523: 2383493, 2526: 2383719}
[2025-10-07 06:10:39] 2025-10-07 04:09:47,154 | INFO     | --------------------------------------------------
[2025-10-07 06:10:39] 2025-10-07 04:09:47,154 | INFO     | 
[2025-10-07 06:10:39] 2025-10-07 04:09:47,154 | INFO     | executing command: ls -lF /tmp/job_10287793/atlas/pilot/slots/0
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 06:10:39] 2025-10-07 04:09:47,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,164 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 06:10:39] 2025-10-07 04:09:47,164 | INFO     | job 6830520203 has completed (purged errors)
[2025-10-07 06:10:39] 2025-10-07 04:09:47,164 | INFO     | overall cleanup function is called
[2025-10-07 06:10:39] 2025-10-07 04:09:48,170 | INFO     | --- collectZombieJob: --- 10, [29550]
[2025-10-07 06:10:39] 2025-10-07 04:09:48,170 | INFO     | zombie collector waiting for pid 29550
[2025-10-07 06:10:39] 2025-10-07 04:09:48,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 06:10:39] 2025-10-07 04:09:48,170 | INFO     | collected zombie processes
[2025-10-07 06:10:39] 2025-10-07 04:09:48,170 | INFO     | will attempt to kill all subprocesses of pid=29550
[2025-10-07 06:10:39] 2025-10-07 04:09:48,256 | INFO     | process IDs to be killed: [29550] (in reverse order)
[2025-10-07 06:10:39] 2025-10-07 04:09:48,286 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 06:10:39] 2025-10-07 04:09:48,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 06:10:39] 2025-10-07 04:09:48,289 | INFO     | did not find any defunct processes belonging to 29550
[2025-10-07 06:10:39] 2025-10-07 04:09:48,292 | INFO     | did not find any defunct processes belonging to 29550
[2025-10-07 06:10:39] 2025-10-07 04:09:48,292 | INFO     | ready for new job
[2025-10-07 06:10:39] 2025-10-07 04:09:48,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 06:10:39] 2025-10-07 04:09:48,293 | INFO     | ***************************************
[2025-10-07 06:10:39] 2025-10-07 04:09:48,293 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 06:10:39] 2025-10-07 04:09:48,293 | INFO     | ***************************************
[2025-10-07 06:10:39] 2025-10-07 04:09:48,293 | INFO     | 
[2025-10-07 06:10:39] 2025-10-07 04:09:48,307 | INFO     | architecture information:
[2025-10-07 06:10:39] 2025-10-07 04:09:48,307 | INFO     | executing command: cat /etc/os-release
[2025-10-07 06:10:39] 2025-10-07 04:09:48,314 | INFO     | cat /etc/os-release:
[2025-10-07 06:10:39] NAME="CentOS Linux"
[2025-10-07 06:10:39] VERSION="7 (Core)"
[2025-10-07 06:10:39] ID="centos"
[2025-10-07 06:10:39] ID_LIKE="rhel fedora"
[2025-10-07 06:10:39] VERSION_ID="7"
[2025-10-07 06:10:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 06:10:39] ANSI_COLOR="0;31"
[2025-10-07 06:10:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 06:10:39] HOME_URL="https://www.centos.org/"
[2025-10-07 06:10:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 06:10:39] 
[2025-10-07 06:10:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 06:10:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 06:10:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 06:10:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 06:10:39] 
[2025-10-07 06:10:39] 2025-10-07 04:09:48,314 | INFO     | ***************************************
[2025-10-07 06:10:39] 2025-10-07 04:09:48,817 | INFO     | executing command: df -mP /tmp/job_10287793/atlas/pilot/slots/0
[2025-10-07 06:10:39] 2025-10-07 04:09:48,823 | INFO     | sufficient remaining disk space (228122951680 B)
[2025-10-07 06:10:39] 2025-10-07 04:09:48,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 06:10:39] 2025-10-07 04:09:48,823 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 06:10:39] 2025-10-07 04:09:48,823 | INFO     | update_server=False
[2025-10-07 06:10:39] 2025-10-07 04:09:48,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 06:10:39] 2025-10-07 04:09:48,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 06:10:39] 2025-10-07 04:09:49,263 | INFO     | all payload control threads have been joined
[2025-10-07 06:10:39] 2025-10-07 04:09:49,341 | INFO     | all data control threads have been joined
[2025-10-07 06:10:39] 2025-10-07 04:09:49,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 06:10:39] 2025-10-07 04:09:49,495 | INFO     | aborting loop
[2025-10-07 06:10:39] 2025-10-07 04:09:49,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 06:10:39] 2025-10-07 04:09:49,829 | INFO     | [job] retrieve thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:49,829 | INFO     | [job] queue monitor thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:49,871 | INFO     | [data] copytool_in thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:49,937 | INFO     | all job control threads have been joined
[2025-10-07 06:10:39] 2025-10-07 04:09:50,157 | INFO     | [payload] validate_post thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:50,268 | INFO     | [payload] control thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:50,346 | INFO     | [data] control thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:50,501 | INFO     | [job] job monitor thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:50,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 06:10:39] 2025-10-07 04:09:50,942 | INFO     | [job] control thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:50,968 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:51,018 | INFO     | [payload] failed_post thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:51,064 | INFO     | [job] validate thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:51,072 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:51,112 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:51,588 | INFO     | [data] copytool_out thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:54,529 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:09:59,802 | INFO     | job.realtimelogging is not enabled
[2025-10-07 06:10:39] 2025-10-07 04:10:00,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 06:10:39] 2025-10-07 04:10:18,703 | INFO     | PID=23013 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 06:10:39] 2025-10-07 04:10:18,703 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 06:10:39] 2025-10-07 04:10:18,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 06:10:39] 2025-10-07 04:10:18,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 06:10:39] 2025-10-07 04:10:32,740 | INFO     | [monitor] cgroup control has ended
[2025-10-07 06:10:39] 2025-10-07 04:10:34,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456060544768)>']
[2025-10-07 06:10:39] 2025-10-07 04:10:34,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 06:10:39] 2025-10-07 04:10:34,784 | INFO     | [monitor] control thread has ended
[2025-10-07 06:10:39] 2025-10-07 04:10:39,117 | INFO     | all workflow threads have been joined
[2025-10-07 06:10:39] 2025-10-07 04:10:39,117 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 06:10:39] 2025-10-07 04:10:39,117 | INFO     | traces error code: 0
[2025-10-07 06:10:39] 2025-10-07 04:10:39,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 06:10:39] 2025-10-07 04:10:39,175 [wrapper] ==== pilot stdout END ====
[2025-10-07 06:10:39] 2025-10-07 04:10:39,177 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 06:10:39] 2025-10-07 04:10:39,178 [wrapper] pilotpid: 23013
[2025-10-07 06:10:39] 2025-10-07 04:10:39,179 [wrapper] Pilot exit status: 0
[2025-10-07 06:10:39] 2025-10-07 04:10:39,183 [wrapper] pandaids: 6830520203
[2025-10-07 06:10:39] 2025-10-07 04:10:39,203 [wrapper] cleanup supervisor_pilot 19053 23014
[2025-10-07 06:10:39] 2025-10-07 04:10:39,204 [wrapper] Test setup, not cleaning
[2025-10-07 06:10:39] 2025-10-07 04:10:39,205 [wrapper] apfmon messages muted
[2025-10-07 06:10:39] 2025-10-07 04:10:39,206 [wrapper] ==== wrapper stdout END ====
[2025-10-07 06:10:39] 2025-10-07 04:10:39,207 [wrapper] ==== wrapper stderr END ====
[2025-10-07 06:10:39]  *** Error codes and diagnostics ***
[2025-10-07 06:10:39]     "exeErrorCode": 0,
[2025-10-07 06:10:39]     "exeErrorDiag": "",
[2025-10-07 06:10:39]     "pilotErrorCode": 0,
[2025-10-07 06:10:39]     "pilotErrorDiag": "",
[2025-10-07 06:10:39]  *** Listing of results directory ***
[2025-10-07 06:10:39] total 394588
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user    552446 Oct  5 00:48 pilot3.tar.gz
[2025-10-07 06:10:39] -rwx------ 1 mf493845 unix-user     36292 Oct  5 00:50 runpilot2-wrapper.sh
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user      5112 Oct  5 00:50 queuedata.json
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user       100 Oct  7 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 06:10:39] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct  7 04:32 run_atlas
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user       105 Oct  7 04:32 job.xml
[2025-10-07 06:10:39] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  7 05:27 start_atlas.sh
[2025-10-07 06:10:39] drwxrwx--x 2 mf493845 unix-user       100 Oct  7 05:27 shared
[2025-10-07 06:10:39] -rw-r--r-- 2 mf493845 unix-user    565602 Oct  7 05:27 input.tar.gz
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user      6388 Oct  7 05:27 init_data.xml
[2025-10-07 06:10:39] -rw-r--r-- 2 mf493845 unix-user 215289853 Oct  7 05:27 EVNT.46376901._002531.pool.root.1
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user         0 Oct  7 05:27 boinc_setup_complete
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user      8192 Oct  7 05:27 boinc_mmap_file
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user         0 Oct  7 05:27 boinc_lockfile
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user      2518 Oct  7 05:27 pandaJob.out
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user    974984 Oct  7 05:27 agis_schedconf.cvmfs.json
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user   1560401 Oct  7 05:27 agis_ddmendpoints.agis.ALL.json
[2025-10-07 06:10:39] drwx------ 4 mf493845 unix-user       400 Oct  7 05:27 pilot3
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user 183471037 Oct  7 06:09 HITS.46376905._069795.pool.root.1
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user      1017 Oct  7 06:09 memory_monitor_summary.json
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user    308526 Oct  7 06:09 log.46376905._069795.job.log.tgz.1
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user      7773 Oct  7 06:09 heartbeat.json
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user        95 Oct  7 06:10 pilot_heartbeat.json
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user      4832 Oct  7 06:10 pilotlog.txt
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user    410475 Oct  7 06:10 log.46376905._069795.job.log.1
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user       357 Oct  7 06:10 output.list
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user       620 Oct  7 06:10 runtime_log
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user    737280 Oct  7 06:10 result.tar.gz
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user      9076 Oct  7 06:10 runtime_log.err
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user       642 Oct  7 06:10 3SQODmTGQP8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7gEMDmzegT4n.diag
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user     22146 Oct  7 06:10 stderr.txt
[2025-10-07 06:10:39] HITS file was successfully produced:
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user 183471037 Oct  7 06:09 shared/HITS.pool.root.1
[2025-10-07 06:10:39]  *** Contents of shared directory: ***
[2025-10-07 06:10:39] total 390708
[2025-10-07 06:10:39] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  7 05:27 start_atlas.sh
[2025-10-07 06:10:39] -rw-r--r-- 2 mf493845 unix-user    565602 Oct  7 05:27 input.tar.gz
[2025-10-07 06:10:39] -rw-r--r-- 2 mf493845 unix-user 215289853 Oct  7 05:27 ATLAS.root_0
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user 183471037 Oct  7 06:09 HITS.pool.root.1
[2025-10-07 06:10:39] -rw------- 1 mf493845 unix-user    737280 Oct  7 06:10 result.tar.gz
06:10:40 (19180): run_atlas exited; CPU time 18040.842217
06:10:40 (19180): called boinc_finish(0)

</stderr_txt>
]]>

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