Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:08:13 (2765996): wrapper (7.7.26015): starting
22:08:13 (2765996): wrapper: running run_atlas (--nthreads 9)
[2025-10-06 22:08:13] Arguments: --nthreads 9
[2025-10-06 22:08:13] Threads: 9
[2025-10-06 22:08:13] Checking for CVMFS
[2025-10-06 22:08:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 22:08:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 22:08:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 22:08:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 22:08:13] 2.13.2.0 1173468 115996 358532 151419 2 303 37653839 40960001 22072 16776704 0 228112599 99.754 145238267 35860 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-06 22:08:13] CVMFS is ok
[2025-10-06 22:08:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 22:08:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 22:08:13] Further information can be found at the LHC@home message board.
[2025-10-06 22:08:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 22:08:13] Checking for apptainer binary...
[2025-10-06 22:08:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 22:08:13] Running /usr/bin/apptainer --version
[2025-10-06 22:08:13] apptainer version 1.4.2-1.el9
[2025-10-06 22:08:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 22:08:14] c-212-20.aglt2.org
[2025-10-06 22:08:14] apptainer works
[2025-10-06 22:08:14] Set ATHENA_PROC_NUMBER=9
[2025-10-06 22:08:14] Set ATHENA_CORE_NUMBER=9
[2025-10-06 22:08:14] Starting ATLAS job with PandaID=6830225647
[2025-10-06 22:08:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 02:45:03]  *** The last 200 lines of the pilot log: ***
[2025-10-07 02:45:03] 2025-10-07 06:44:05,897 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 02:45:03] 2025-10-07 06:44:05,897 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 02:45:03] 2025-10-07 06:44:05,901 | INFO     | fitting pss+swap vs Time
[2025-10-07 02:45:03] 2025-10-07 06:44:05,901 | INFO     | sum of square deviations: 6103286527.5
[2025-10-07 02:45:03] 2025-10-07 06:44:05,903 | INFO     | sum of deviations: 36489272495.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,903 | INFO     | mean x: 1759811158.5
[2025-10-07 02:45:03] 2025-10-07 06:44:05,903 | INFO     | mean y: 2522406.511111111
[2025-10-07 02:45:03] 2025-10-07 06:44:05,903 | INFO     | -- intersect: -10518731775.627258
[2025-10-07 02:45:03] 2025-10-07 06:44:05,903 | INFO     | intersect: -10518731775.627258
[2025-10-07 02:45:03] 2025-10-07 06:44:05,903 | INFO     | chi2: 1.267343640112437
[2025-10-07 02:45:03] 2025-10-07 06:44:05,904 | INFO     | sum of square deviations: 5770452380.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,905 | INFO     | sum of deviations: 35769337502.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,905 | INFO     | mean x: 1759811006.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,905 | INFO     | mean y: 2522076.566037736
[2025-10-07 02:45:03] 2025-10-07 06:44:05,905 | INFO     | -- intersect: -10906028877.171864
[2025-10-07 02:45:03] 2025-10-07 06:44:05,905 | INFO     | intersect: -10906028877.171864
[2025-10-07 02:45:03] 2025-10-07 06:44:05,906 | INFO     | chi2: 1.2676959964859345
[2025-10-07 02:45:03] 2025-10-07 06:44:05,906 | INFO     | current chi2=1.2676959964859345 (change=-0.02780274917908202 %)
[2025-10-07 02:45:03] 2025-10-07 06:44:05,906 | INFO     | right removable region: 264
[2025-10-07 02:45:03] 2025-10-07 06:44:05,906 | INFO     | sum of square deviations: 5770452380.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,908 | INFO     | sum of deviations: 3169177896.000001
[2025-10-07 02:45:03] 2025-10-07 06:44:05,908 | INFO     | mean x: 1759811311.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,908 | INFO     | mean y: 2537506.0264150943
[2025-10-07 02:45:03] 2025-10-07 06:44:05,908 | INFO     | -- intersect: -963964726.4990673
[2025-10-07 02:45:03] 2025-10-07 06:44:05,908 | INFO     | intersect: -963964726.4990673
[2025-10-07 02:45:03] 2025-10-07 06:44:05,908 | INFO     | chi2: 0.0428047954900218
[2025-10-07 02:45:03] 2025-10-07 06:44:05,908 | INFO     | current chi2=0.0428047954900218 (change=96.62247916545948 %)
[2025-10-07 02:45:03] 2025-10-07 06:44:05,908 | INFO     | sum of square deviations: 5449944045.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,910 | INFO     | sum of deviations: 8635236921.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,910 | INFO     | mean x: 1759811463.5
[2025-10-07 02:45:03] 2025-10-07 06:44:05,910 | INFO     | mean y: 2534899.9153846153
[2025-10-07 02:45:03] 2025-10-07 06:44:05,910 | INFO     | -- intersect: -2785821970.932863
[2025-10-07 02:45:03] 2025-10-07 06:44:05,910 | INFO     | intersect: -2785821970.932863
[2025-10-07 02:45:03] 2025-10-07 06:44:05,910 | INFO     | chi2: 0.002763317522707434
[2025-10-07 02:45:03] 2025-10-07 06:44:05,910 | INFO     | current chi2=0.002763317522707434 (change=93.54437396307246 %)
[2025-10-07 02:45:03] 2025-10-07 06:44:05,911 | INFO     | sum of square deviations: 5141528960.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,912 | INFO     | sum of deviations: 7383064484.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,912 | INFO     | mean x: 1759811616.0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,912 | INFO     | mean y: 2535518.4235294117
[2025-10-07 02:45:03] 2025-10-07 06:44:05,912 | INFO     | -- intersect: -2524495398.1970873
[2025-10-07 02:45:03] 2025-10-07 06:44:05,912 | INFO     | intersect: -2524495398.1970873
[2025-10-07 02:45:03] 2025-10-07 06:44:05,913 | INFO     | time since job start (16537s) is within the limit (172800.0s)
[2025-10-07 02:45:03] 2025-10-07 06:44:05,913 | INFO     | chi2: 0.002435186122896342
[2025-10-07 02:45:03] 2025-10-07 06:44:05,913 | INFO     | current chi2=0.002435186122896342 (change=11.874545618253688 %)
[2025-10-07 02:45:03] 2025-10-07 06:44:05,913 | INFO     | left removable region: 30
[2025-10-07 02:45:03] 2025-10-07 06:44:05,913 | INFO     | sum of square deviations: 3972995422.5
[2025-10-07 02:45:03] 2025-10-07 06:44:05,915 | INFO     | sum of deviations: 4208659558.999999
[2025-10-07 02:45:03] 2025-10-07 06:44:05,915 | INFO     | mean x: 1759811890.5
[2025-10-07 02:45:03] 2025-10-07 06:44:05,915 | INFO     | mean y: 2537075.606837607
[2025-10-07 02:45:03] 2025-10-07 06:44:05,915 | INFO     | -- intersect: -1861660676.3085651
[2025-10-07 02:45:03] 2025-10-07 06:44:05,915 | INFO     | intersect: -1861660676.3085651
[2025-10-07 02:45:03] 2025-10-07 06:44:05,915 | INFO     | chi2: 0.0016741585590433518
[2025-10-07 02:45:03] 2025-10-07 06:44:05,915 | INFO     | -- intersect: -1861660676.3085651
[2025-10-07 02:45:03] 2025-10-07 06:44:05,916 | INFO     | current memory leak: 1.06 B/s (using 234 data points, chi2=0.00)
[2025-10-07 02:45:03] 2025-10-07 06:44:05,916 | INFO     | could have reported an average CPU frequency of 3208 MHz (13 samples)
[2025-10-07 02:45:03] 2025-10-07 06:44:05,916 | INFO     | ..............................
[2025-10-07 02:45:03] 2025-10-07 06:44:05,916 | INFO     | . Timing measurements:
[2025-10-07 02:45:03] 2025-10-07 06:44:05,916 | INFO     | . get job = 0 s
[2025-10-07 02:45:03] 2025-10-07 06:44:05,916 | INFO     | . initial setup = 2 s
[2025-10-07 02:45:03] 2025-10-07 06:44:05,916 | INFO     | . payload setup = 12 s
[2025-10-07 02:45:03] 2025-10-07 06:44:05,917 | INFO     | . stage-in = 0 s
[2025-10-07 02:45:03] 2025-10-07 06:44:05,917 | INFO     | . payload execution = 16481 s
[2025-10-07 02:45:03] 2025-10-07 06:44:05,917 | INFO     | . stage-out = 5 s
[2025-10-07 02:45:03] 2025-10-07 06:44:05,917 | INFO     | . log creation = 0 s
[2025-10-07 02:45:03] 2025-10-07 06:44:05,917 | INFO     | ..............................
[2025-10-07 02:45:03] 2025-10-07 06:44:05,990 | INFO     | 
[2025-10-07 02:45:03] 2025-10-07 06:44:05,990 | INFO     | job summary report
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | --------------------------------------------------
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | PanDA job id: 6830225647
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | task id: 46376905
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | errors: (none)
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | pilot state: finished 
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | transexitcode: 0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | exeerrorcode: 0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | exeerrordiag: 
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | exitcode: 0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | exitmsg: OK
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | cpuconsumptiontime: 28151 s
[2025-10-07 02:45:03] 2025-10-07 06:44:05,991 | INFO     | nevents: 400
[2025-10-07 02:45:03] 2025-10-07 06:44:05,992 | INFO     | neventsw: 0
[2025-10-07 02:45:03] 2025-10-07 06:44:05,992 | INFO     | pid: 2776385
[2025-10-07 02:45:03] 2025-10-07 06:44:05,992 | INFO     | pgrp: 2776385
[2025-10-07 02:45:03] 2025-10-07 06:44:05,992 | INFO     | corecount: 9
[2025-10-07 02:45:03] 2025-10-07 06:44:05,992 | INFO     | event service: False
[2025-10-07 02:45:03] 2025-10-07 06:44:05,992 | INFO     | sizes: {0: 2348764, 7: 2349026, 11: 2349054, 16497: 2380847, 16498: 2380846, 16504: 2389900, 16505: 2390084, 16518: 2390278}
[2025-10-07 02:45:03] 2025-10-07 06:44:05,992 | INFO     | --------------------------------------------------
[2025-10-07 02:45:03] 2025-10-07 06:44:05,992 | INFO     | 
[2025-10-07 02:45:03] 2025-10-07 06:44:05,992 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-07 02:45:03] 2025-10-07 06:44:06,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,013 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 02:45:03] 2025-10-07 06:44:06,014 | INFO     | job 6830225647 has completed (purged errors)
[2025-10-07 02:45:03] 2025-10-07 06:44:06,014 | INFO     | overall cleanup function is called
[2025-10-07 02:45:03] 2025-10-07 06:44:07,027 | INFO     | --- collectZombieJob: --- 10, [2776385]
[2025-10-07 02:45:03] 2025-10-07 06:44:07,027 | INFO     | zombie collector waiting for pid 2776385
[2025-10-07 02:45:03] 2025-10-07 06:44:07,027 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 02:45:03] 2025-10-07 06:44:07,027 | INFO     | collected zombie processes
[2025-10-07 02:45:03] 2025-10-07 06:44:07,027 | INFO     | will attempt to kill all subprocesses of pid=2776385
[2025-10-07 02:45:03] 2025-10-07 06:44:07,503 | INFO     | process IDs to be killed: [2776385] (in reverse order)
[2025-10-07 02:45:03] 2025-10-07 06:44:07,640 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 02:45:03] 2025-10-07 06:44:07,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 02:45:03] 2025-10-07 06:44:07,717 | INFO     | did not find any defunct processes belonging to 2776385
[2025-10-07 02:45:03] 2025-10-07 06:44:07,732 | INFO     | did not find any defunct processes belonging to 2776385
[2025-10-07 02:45:03] 2025-10-07 06:44:07,733 | INFO     | ready for new job
[2025-10-07 02:45:03] 2025-10-07 06:44:07,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 02:45:03] 2025-10-07 06:44:07,735 | INFO     | ***************************************
[2025-10-07 02:45:03] 2025-10-07 06:44:07,735 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 02:45:03] 2025-10-07 06:44:07,735 | INFO     | ***************************************
[2025-10-07 02:45:03] 2025-10-07 06:44:07,736 | INFO     | 
[2025-10-07 02:45:03] 2025-10-07 06:44:07,779 | INFO     | architecture information:
[2025-10-07 02:45:03] 2025-10-07 06:44:07,779 | INFO     | executing command: cat /etc/os-release
[2025-10-07 02:45:03] 2025-10-07 06:44:07,794 | INFO     | cat /etc/os-release:
[2025-10-07 02:45:03] NAME="CentOS Linux"
[2025-10-07 02:45:03] VERSION="7 (Core)"
[2025-10-07 02:45:03] ID="centos"
[2025-10-07 02:45:03] ID_LIKE="rhel fedora"
[2025-10-07 02:45:03] VERSION_ID="7"
[2025-10-07 02:45:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 02:45:03] ANSI_COLOR="0;31"
[2025-10-07 02:45:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 02:45:03] HOME_URL="https://www.centos.org/"
[2025-10-07 02:45:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 02:45:03] 
[2025-10-07 02:45:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 02:45:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 02:45:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 02:45:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 02:45:03] 
[2025-10-07 02:45:03] 2025-10-07 06:44:07,794 | INFO     | ***************************************
[2025-10-07 02:45:03] 2025-10-07 06:44:08,301 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-07 02:45:03] 2025-10-07 06:44:08,329 | INFO     | sufficient remaining disk space (126504402944 B)
[2025-10-07 02:45:03] 2025-10-07 06:44:08,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 02:45:03] 2025-10-07 06:44:08,330 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 02:45:03] 2025-10-07 06:44:08,330 | INFO     | update_server=False
[2025-10-07 02:45:03] 2025-10-07 06:44:08,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 02:45:03] 2025-10-07 06:44:08,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 02:45:03] 2025-10-07 06:44:08,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 02:45:03] 2025-10-07 06:44:08,331 | INFO     | aborting loop
[2025-10-07 02:45:03] 2025-10-07 06:44:08,765 | INFO     | all data control threads have been joined
[2025-10-07 02:45:03] 2025-10-07 06:44:09,337 | INFO     | [job] job monitor thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:09,354 | INFO     | [job] retrieve thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:09,381 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:09,411 | INFO     | all job control threads have been joined
[2025-10-07 02:45:03] 2025-10-07 06:44:09,700 | INFO     | all payload control threads have been joined
[2025-10-07 02:45:03] 2025-10-07 06:44:09,750 | INFO     | [payload] validate_post thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:09,772 | INFO     | [data] control thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:09,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 02:45:03] 2025-10-07 06:44:10,066 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:10,312 | INFO     | [payload] failed_post thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:10,417 | INFO     | [job] control thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:10,433 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:10,613 | INFO     | [data] copytool_in thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:10,617 | INFO     | [job] validate thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:10,623 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:10,707 | INFO     | [payload] control thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:11,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 02:45:03] 2025-10-07 06:44:11,840 | INFO     | [data] copytool_out thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:12,010 | INFO     | [job] queue monitor thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:12,359 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 02:45:03] 2025-10-07 06:44:39,619 | INFO     | PID=2769684 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 02:45:03] 2025-10-07 06:44:39,619 | INFO     | .. there are 19 such processes running
[2025-10-07 02:45:03] 2025-10-07 06:44:39,619 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 02:45:03] 2025-10-07 06:44:39,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 02:45:03] 2025-10-07 06:44:39,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 02:45:03] 2025-10-07 06:44:56,023 | INFO     | [monitor] cgroup control has ended
[2025-10-07 02:45:03] 2025-10-07 06:44:57,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975800739648)>', '<ExcThread(monitor, started 139975324591872)>']
[2025-10-07 02:45:03] 2025-10-07 06:44:57,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 02:45:03] 2025-10-07 06:44:57,764 | INFO     | [monitor] control thread has ended
[2025-10-07 02:45:03] 2025-10-07 06:45:02,303 | INFO     | all workflow threads have been joined
[2025-10-07 02:45:03] 2025-10-07 06:45:02,376 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 02:45:03] 2025-10-07 06:45:02,376 | INFO     | traces error code: 0
[2025-10-07 02:45:03] 2025-10-07 06:45:02,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 02:45:03] 2025-10-07 06:45:02,725 [wrapper] ==== pilot stdout END ====
[2025-10-07 02:45:03] 2025-10-07 06:45:02,728 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 02:45:03] 2025-10-07 06:45:02,730 [wrapper] pilotpid: 2769684
[2025-10-07 02:45:03] 2025-10-07 06:45:02,733 [wrapper] Pilot exit status: 0
[2025-10-07 02:45:03] 2025-10-07 06:45:02,822 [wrapper] pandaids: 6830225647
[2025-10-07 02:45:03] 2025-10-07 06:45:02,910 [wrapper] cleanup supervisor_pilot 3375062 2769685
[2025-10-07 02:45:03] 2025-10-07 06:45:02,930 [wrapper] Test setup, not cleaning
[2025-10-07 02:45:03] 2025-10-07 06:45:02,966 [wrapper] apfmon messages muted
[2025-10-07 02:45:03] 2025-10-07 06:45:02,988 [wrapper] ==== wrapper stdout END ====
[2025-10-07 02:45:03] 2025-10-07 06:45:03,008 [wrapper] ==== wrapper stderr END ====
[2025-10-07 02:45:03]  *** Error codes and diagnostics ***
[2025-10-07 02:45:03]     "exeErrorCode": 0,
[2025-10-07 02:45:03]     "exeErrorDiag": "",
[2025-10-07 02:45:03]     "pilotErrorCode": 0,
[2025-10-07 02:45:03]     "pilotErrorDiag": "",
[2025-10-07 02:45:03]  *** Listing of results directory ***
[2025-10-07 02:45:03] total 391776
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 15:56 queuedata.json
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 15:56 pilot3.tar.gz
[2025-10-07 02:45:03] -rwx------. 1 boincer umatlas     36292 Oct  4 15:56 runpilot2-wrapper.sh
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas       100 Oct  6 22:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 02:45:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 22:08 run_atlas
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas       105 Oct  6 22:08 job.xml
[2025-10-07 02:45:03] -rw-r--r--. 2 boincer umatlas 214957198 Oct  6 22:08 EVNT.46376901._000927.pool.root.1
[2025-10-07 02:45:03] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 22:08 start_atlas.sh
[2025-10-07 02:45:03] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 22:08 shared
[2025-10-07 02:45:03] -rw-r--r--. 2 boincer umatlas    565607 Oct  6 22:08 input.tar.gz
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas         0 Oct  6 22:08 boinc_lockfile
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas      2518 Oct  6 22:08 pandaJob.out
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas    975000 Oct  6 22:08 agis_schedconf.cvmfs.json
[2025-10-07 02:45:03] drwx------. 4 boincer umatlas      4096 Oct  6 22:08 pilot3
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas      6946 Oct  7 02:39 init_data.xml
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas 176784717 Oct  7 02:43 HITS.46376905._066548.pool.root.1
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas       530 Oct  7 02:43 boinc_task_state.xml
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas        95 Oct  7 02:43 pilot_heartbeat.json
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas      1034 Oct  7 02:43 memory_monitor_summary.json
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas   1560401 Oct  7 02:43 agis_ddmendpoints.agis.ALL.json
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas    518522 Oct  7 02:43 log.46376905._066548.job.log.tgz.1
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas      7779 Oct  7 02:44 heartbeat.json
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas      8192 Oct  7 02:44 boinc_mmap_file
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas        27 Oct  7 02:44 wrapper_checkpoint.txt
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas      4825 Oct  7 02:45 pilotlog.txt
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas   2255566 Oct  7 02:45 log.46376905._066548.job.log.1
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas       357 Oct  7 02:45 output.list
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas       620 Oct  7 02:45 runtime_log
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas   2795520 Oct  7 02:45 result.tar.gz
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas      8704 Oct  7 02:45 runtime_log.err
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas       658 Oct  7 02:45 iQIKDm6XNP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIUMNDmfEtEpn.diag
[2025-10-07 02:45:03] -rw-r--r--. 1 boincer umatlas     20949 Oct  7 02:45 stderr.txt
[2025-10-07 02:45:03] HITS file was successfully produced:
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas 176784717 Oct  7 02:43 shared/HITS.pool.root.1
[2025-10-07 02:45:03]  *** Contents of shared directory: ***
[2025-10-07 02:45:03] total 385872
[2025-10-07 02:45:03] -rw-r--r--. 2 boincer umatlas 214957198 Oct  6 22:08 ATLAS.root_0
[2025-10-07 02:45:03] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 22:08 start_atlas.sh
[2025-10-07 02:45:03] -rw-r--r--. 2 boincer umatlas    565607 Oct  6 22:08 input.tar.gz
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas 176784717 Oct  7 02:43 HITS.pool.root.1
[2025-10-07 02:45:03] -rw-------. 1 boincer umatlas   2795520 Oct  7 02:45 result.tar.gz
02:45:05 (2765996): run_atlas exited; CPU time 28587.174021
02:45:05 (2765996): called boinc_finish(0)

</stderr_txt>
]]>

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