Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:16:18 (1755911): wrapper (7.7.26015): starting
21:16:18 (1755911): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 21:16:18] Arguments: --nthreads 8
[2025-10-06 21:16:18] Threads: 8
[2025-10-06 21:16:18] Checking for CVMFS
[2025-10-06 21:16:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 21:16:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 21:16:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 21:16:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 21:16:19] 2.13.2.0 3269412 27855 266304 151418 3 37 33252666 40960000 40178 16776704 0 329367820 99.812 160564221 36663 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-06 21:16:19] CVMFS is ok
[2025-10-06 21:16:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 21:16:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 21:16:19] Further information can be found at the LHC@home message board.
[2025-10-06 21:16:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 21:16:19] Checking for apptainer binary...
[2025-10-06 21:16:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 21:16:19] Running /usr/bin/apptainer --version
[2025-10-06 21:16:19] apptainer version 1.4.2-1.el9
[2025-10-06 21:16:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 21:16:19] c8-16-2.aglt2.org
[2025-10-06 21:16:19] apptainer works
[2025-10-06 21:16:20] Set ATHENA_PROC_NUMBER=8
[2025-10-06 21:16:20] Set ATHENA_CORE_NUMBER=8
[2025-10-06 21:16:20] Starting ATLAS job with PandaID=6830523177
[2025-10-06 21:16:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 22:16:13]  *** The last 200 lines of the pilot log: ***
[2025-10-06 22:16:13] 2025-10-07 02:15:11,041 | INFO     | preparing for final server update for job 6830523177 in state='finished'
[2025-10-06 22:16:13] 2025-10-07 02:15:11,041 | INFO     | this job has now completed (state=finished)
[2025-10-06 22:16:13] 2025-10-07 02:15:11,041 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-06 22:16:13] 2025-10-07 02:15:11,041 | INFO     | log transfer has been attempted: DONE
[2025-10-06 22:16:13] 2025-10-07 02:15:11,042 | INFO     | job 6830523177 has finished - writing final server update
[2025-10-06 22:16:13] 2025-10-07 02:15:11,042 | INFO     | total number of processed events: 400 (read)
[2025-10-06 22:16:13] 2025-10-07 02:15:11,042 | INFO     | executing command: lscpu
[2025-10-06 22:16:13] 2025-10-07 02:15:11,156 | INFO     | time since job start (3489s) is within the limit (172800.0s)
[2025-10-06 22:16:13] 2025-10-07 02:15:11,157 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-06 22:16:13] 2025-10-07 02:15:13,165 | INFO     | time since job start (3491s) is within the limit (172800.0s)
[2025-10-06 22:16:13] 2025-10-07 02:15:14,431 | WARNING  | process 1774766 can no longer be monitored (due to stat problems) - aborting
[2025-10-06 22:16:13] 2025-10-07 02:15:14,431 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6830523177/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 22:16:13] 2025-10-07 02:15:14,436 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3059843 B
[2025-10-06 22:16:13] 2025-10-07 02:15:14,436 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15874 B
[2025-10-06 22:16:13] 2025-10-07 02:15:14,436 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-10-06 22:16:13] 2025-10-07 02:15:15,171 | INFO     | time since job start (3493s) is within the limit (172800.0s)
[2025-10-06 22:16:13] 2025-10-07 02:15:17,178 | INFO     | time since job start (3495s) is within the limit (172800.0s)
[2025-10-06 22:16:13] 2025-10-07 02:15:19,185 | INFO     | time since job start (3497s) is within the limit (172800.0s)
[2025-10-06 22:16:13] 2025-10-07 02:15:21,191 | INFO     | time since job start (3499s) is within the limit (172800.0s)
[2025-10-06 22:16:13] 2025-10-07 02:15:23,310 | INFO     | PID=1762817 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-06 22:16:13] 2025-10-07 02:15:23,310 | INFO     | .. there are 49 such processes running
[2025-10-06 22:16:13] 2025-10-07 02:15:24,311 | INFO     | time since job start (3502s) is within the limit (172800.0s)
[2025-10-06 22:16:13] 2025-10-07 02:15:26,325 | INFO     | time since job start (3504s) is within the limit (172800.0s)
[2025-10-06 22:16:13] 2025-10-07 02:15:28,332 | INFO     | time since job start (3506s) is within the limit (172800.0s)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,435 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-06 22:16:13] 2025-10-07 02:15:29,453 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9875703125003
[2025-10-06 22:16:13] 2025-10-07 02:15:29,456 | INFO     | sufficient remaining disk space (165892063232 B)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,457 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,457 | INFO     | size of work directory /tmp/boinchome/slots/11/PanDA_Pilot-6830523177: 3350523 B (within 2537553920 B limit)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,457 | INFO     | pfn file=/tmp/boinchome/slots/11/PanDA_Pilot-6830523177/HITS.46376905._070403.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,457 | INFO     | total size of present files: 0 B (workdir size: 3350523 B)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,457 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/11/PanDA_Pilot-6830523177/HITS.46376905._070403.pool.root.1 since it does not exist
[2025-10-06 22:16:13] 2025-10-07 02:15:29,485 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6830523177/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,485 | INFO     | extracted standard info from prmon json
[2025-10-06 22:16:13] 2025-10-07 02:15:29,489 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 22:16:13] 2025-10-07 02:15:29,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 22:16:13] 2025-10-07 02:15:29,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 22:16:13] 2025-10-07 02:15:29,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 22:16:13] 2025-10-07 02:15:29,490 | INFO     | fitting pss+swap vs Time
[2025-10-06 22:16:13] 2025-10-07 02:15:29,490 | INFO     | sum of square deviations: 36465800.0
[2025-10-06 22:16:13] 2025-10-07 02:15:29,490 | INFO     | sum of deviations: -282055277.0
[2025-10-06 22:16:13] 2025-10-07 02:15:29,490 | INFO     | mean x: 1759801682.0
[2025-10-06 22:16:13] 2025-10-07 02:15:29,490 | INFO     | mean y: 2185967.102040816
[2025-10-06 22:16:13] 2025-10-07 02:15:29,490 | INFO     | -- intersect: 13613881058.984734
[2025-10-06 22:16:13] 2025-10-07 02:15:29,490 | INFO     | intersect: 13613881058.984734
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | chi2: 0.02901725312925494
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | -- intersect: 13613881058.984734
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | current memory leak: -7.73 B/s (using 49 data points, chi2=0.03)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | could have reported an average CPU frequency of 3798 MHz (5 samples)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | ..............................
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | . Timing measurements:
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | . get job = 0 s
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | . initial setup = 3 s
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | . payload setup = 27 s
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | . stage-in = 0 s
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | . payload execution = 3411 s
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | . stage-out = 0 s
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | . log creation = 0 s
[2025-10-06 22:16:13] 2025-10-07 02:15:29,491 | INFO     | ..............................
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | 
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | job summary report
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | --------------------------------------------------
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | PanDA job id: 6830523177
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | task id: 46376905
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | errors: (none)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | pilot state: finished 
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | transexitcode: 0
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | exeerrorcode: 0
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | exeerrordiag: 
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | exitcode: 0
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | exitmsg: OK
[2025-10-06 22:16:13] 2025-10-07 02:15:29,839 | INFO     | cpuconsumptiontime: 20268 s
[2025-10-06 22:16:13] 2025-10-07 02:15:29,840 | INFO     | nevents: 400
[2025-10-06 22:16:13] 2025-10-07 02:15:29,840 | INFO     | neventsw: 0
[2025-10-06 22:16:13] 2025-10-07 02:15:29,840 | INFO     | pid: 1774766
[2025-10-06 22:16:13] 2025-10-07 02:15:29,840 | INFO     | pgrp: 1774766
[2025-10-06 22:16:13] 2025-10-07 02:15:29,840 | INFO     | corecount: 8
[2025-10-06 22:16:13] 2025-10-07 02:15:29,840 | INFO     | event service: False
[2025-10-06 22:16:13] 2025-10-07 02:15:29,840 | INFO     | sizes: {0: 2348646, 1: 2348845, 12: 2348845, 22: 2349135, 23: 2349163, 3443: 2374905, 3444: 2383961, 3463: 2384159}
[2025-10-06 22:16:13] 2025-10-07 02:15:29,840 | INFO     | --------------------------------------------------
[2025-10-06 22:16:13] 2025-10-07 02:15:29,840 | INFO     | 
[2025-10-06 22:16:13] 2025-10-07 02:15:29,840 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-10-06 22:16:13] 2025-10-07 02:15:29,888 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,888 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,888 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | job 6830523177 has completed (purged errors)
[2025-10-06 22:16:13] 2025-10-07 02:15:29,889 | INFO     | overall cleanup function is called
[2025-10-06 22:16:13] 2025-10-07 02:15:30,339 | INFO     | number of running child processes to parent process 1774766: 1
[2025-10-06 22:16:13] 2025-10-07 02:15:30,339 | INFO     | maximum number of monitored processes: 6
[2025-10-06 22:16:13] 2025-10-07 02:15:30,340 | INFO     | aborting job monitoring since job object (job id=6830523177) has expired
[2025-10-06 22:16:13] 2025-10-07 02:15:30,903 | INFO     | --- collectZombieJob: --- 10, [1774766]
[2025-10-06 22:16:13] 2025-10-07 02:15:30,903 | INFO     | zombie collector waiting for pid 1774766
[2025-10-06 22:16:13] 2025-10-07 02:15:30,903 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 22:16:13] 2025-10-07 02:15:30,903 | INFO     | collected zombie processes
[2025-10-06 22:16:13] 2025-10-07 02:15:30,903 | INFO     | will attempt to kill all subprocesses of pid=1774766
[2025-10-06 22:16:13] 2025-10-07 02:15:31,856 | INFO     | process IDs to be killed: [1774766] (in reverse order)
[2025-10-06 22:16:13] 2025-10-07 02:15:32,111 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 22:16:13] 2025-10-07 02:15:32,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 22:16:13] 2025-10-07 02:15:32,144 | INFO     | did not find any defunct processes belonging to 1774766
[2025-10-06 22:16:13] 2025-10-07 02:15:32,178 | INFO     | did not find any defunct processes belonging to 1774766
[2025-10-06 22:16:13] 2025-10-07 02:15:32,178 | INFO     | ready for new job
[2025-10-06 22:16:13] 2025-10-07 02:15:32,178 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 22:16:13] 2025-10-07 02:15:32,179 | INFO     | ***************************************
[2025-10-06 22:16:13] 2025-10-07 02:15:32,179 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 22:16:13] 2025-10-07 02:15:32,179 | INFO     | ***************************************
[2025-10-06 22:16:13] 2025-10-07 02:15:32,179 | INFO     | 
[2025-10-06 22:16:13] 2025-10-07 02:15:32,219 | INFO     | architecture information:
[2025-10-06 22:16:13] 2025-10-07 02:15:32,222 | INFO     | executing command: cat /etc/os-release
[2025-10-06 22:16:13] 2025-10-07 02:15:32,242 | INFO     | cat /etc/os-release:
[2025-10-06 22:16:13] NAME="CentOS Linux"
[2025-10-06 22:16:13] VERSION="7 (Core)"
[2025-10-06 22:16:13] ID="centos"
[2025-10-06 22:16:13] ID_LIKE="rhel fedora"
[2025-10-06 22:16:13] VERSION_ID="7"
[2025-10-06 22:16:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 22:16:13] ANSI_COLOR="0;31"
[2025-10-06 22:16:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 22:16:13] HOME_URL="https://www.centos.org/"
[2025-10-06 22:16:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 22:16:13] 
[2025-10-06 22:16:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 22:16:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 22:16:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 22:16:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 22:16:13] 
[2025-10-06 22:16:13] 2025-10-07 02:15:32,242 | INFO     | ***************************************
[2025-10-06 22:16:13] 2025-10-07 02:15:32,745 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-10-06 22:16:13] 2025-10-07 02:15:32,788 | INFO     | sufficient remaining disk space (165891014656 B)
[2025-10-06 22:16:13] 2025-10-07 02:15:32,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 22:16:13] 2025-10-07 02:15:32,788 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 22:16:13] 2025-10-07 02:15:32,788 | INFO     | update_server=False
[2025-10-06 22:16:13] 2025-10-07 02:15:32,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 22:16:13] 2025-10-07 02:15:32,849 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-06 22:16:13] 2025-10-07 02:15:32,849 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-06 22:16:13] 2025-10-07 02:15:32,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 22:16:13] 2025-10-07 02:15:32,849 | INFO     | will abort loop
[2025-10-06 22:16:13] 2025-10-07 02:15:33,165 | INFO     | all payload control threads have been joined
[2025-10-06 22:16:13] 2025-10-07 02:15:33,343 | INFO     | all data control threads have been joined
[2025-10-06 22:16:13] 2025-10-07 02:15:33,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 22:16:13] 2025-10-07 02:15:33,794 | INFO     | [job] retrieve thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:33,854 | INFO     | [data] copytool_in thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:33,855 | INFO     | [job] job monitor thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:33,946 | INFO     | all job control threads have been joined
[2025-10-06 22:16:13] 2025-10-07 02:15:34,170 | INFO     | [payload] control thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:34,351 | INFO     | [data] control thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:34,352 | INFO     | [payload] failed_post thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:34,597 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:34,599 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 22:16:13] 2025-10-07 02:15:34,699 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:34,702 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:34,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 22:16:13] 2025-10-07 02:15:34,894 | INFO     | [payload] validate_post thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:34,952 | INFO     | [job] control thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:35,102 | INFO     | [job] validate thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:35,605 | INFO     | [job] queue monitor thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:35,670 | INFO     | [data] copytool_out thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:38,746 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:15:43,653 | INFO     | job.realtimelogging is not enabled
[2025-10-06 22:16:13] 2025-10-07 02:15:44,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 22:16:13] 2025-10-07 02:16:02,371 | INFO     | PID=1762817 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 22:16:13] 2025-10-07 02:16:02,371 | INFO     | .. there are 48 such processes running
[2025-10-06 22:16:13] 2025-10-07 02:16:02,372 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 22:16:13] 2025-10-07 02:16:02,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 22:16:13] 2025-10-07 02:16:02,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 22:16:13] 2025-10-07 02:16:06,960 | INFO     | [monitor] cgroup control has ended
[2025-10-06 22:16:13] 2025-10-07 02:16:07,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165008308032)>', '<ExcThread(monitor, started 140164378654464)>']
[2025-10-06 22:16:13] 2025-10-07 02:16:08,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 22:16:13] 2025-10-07 02:16:08,406 | INFO     | [monitor] control thread has ended
[2025-10-06 22:16:13] 2025-10-07 02:16:12,745 | INFO     | all workflow threads have been joined
[2025-10-06 22:16:13] 2025-10-07 02:16:12,745 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 22:16:13] 2025-10-07 02:16:12,745 | INFO     | traces error code: 0
[2025-10-06 22:16:13] 2025-10-07 02:16:12,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 22:16:13] 2025-10-07 02:16:12,915 [wrapper] ==== pilot stdout END ====
[2025-10-06 22:16:13] 2025-10-07 02:16:12,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 22:16:13] 2025-10-07 02:16:12,929 [wrapper] pilotpid: 1762817
[2025-10-06 22:16:13] 2025-10-07 02:16:12,934 [wrapper] Pilot exit status: 0
[2025-10-06 22:16:13] 2025-10-07 02:16:12,995 [wrapper] pandaids: 6830523177
[2025-10-06 22:16:13] 2025-10-07 02:16:13,214 [wrapper] cleanup supervisor_pilot 2127253 1762818
[2025-10-06 22:16:13] 2025-10-07 02:16:13,235 [wrapper] Test setup, not cleaning
[2025-10-06 22:16:13] 2025-10-07 02:16:13,242 [wrapper] apfmon messages muted
[2025-10-06 22:16:13] 2025-10-07 02:16:13,245 [wrapper] ==== wrapper stdout END ====
[2025-10-06 22:16:13] 2025-10-07 02:16:13,263 [wrapper] ==== wrapper stderr END ====
[2025-10-06 22:16:13]  *** Error codes and diagnostics ***
[2025-10-06 22:16:13]     "exeErrorCode": 0,
[2025-10-06 22:16:13]     "exeErrorDiag": "",
[2025-10-06 22:16:13]     "pilotErrorCode": 0,
[2025-10-06 22:16:13]     "pilotErrorDiag": "",
[2025-10-06 22:16:13]  *** Listing of results directory ***
[2025-10-06 22:16:13] total 393540
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 19:31 pilot3.tar.gz
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 19:36 queuedata.json
[2025-10-06 22:16:13] -rwx------. 1 boincer umatlas     36292 Oct  4 19:37 runpilot2-wrapper.sh
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas       100 Oct  6 21:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 22:16:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 21:16 run_atlas
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas       105 Oct  6 21:16 job.xml
[2025-10-06 22:16:13] -rw-r--r--. 2 boincer umatlas 216797765 Oct  6 21:16 EVNT.46376901._002556.pool.root.1
[2025-10-06 22:16:13] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 21:16 start_atlas.sh
[2025-10-06 22:16:13] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 21:16 shared
[2025-10-06 22:16:13] -rw-r--r--. 2 boincer umatlas    565601 Oct  6 21:16 input.tar.gz
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas         0 Oct  6 21:16 boinc_lockfile
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas      2519 Oct  6 21:16 pandaJob.out
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas    975000 Oct  6 21:16 agis_schedconf.cvmfs.json
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas   1560401 Oct  6 21:17 agis_ddmendpoints.agis.ALL.json
[2025-10-06 22:16:13] drwx------. 4 boincer umatlas      4096 Oct  6 21:17 pilot3
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas      7162 Oct  6 22:10 init_data.xml
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas 180711105 Oct  6 22:14 HITS.46376905._070403.pool.root.1
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas       529 Oct  6 22:14 boinc_task_state.xml
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas      1030 Oct  6 22:15 memory_monitor_summary.json
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas    299557 Oct  6 22:15 log.46376905._070403.job.log.tgz.1
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas      7775 Oct  6 22:15 heartbeat.json
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas        95 Oct  6 22:16 pilot_heartbeat.json
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas      5084 Oct  6 22:16 pilotlog.txt
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas    494738 Oct  6 22:16 log.46376905._070403.job.log.1
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas      8192 Oct  6 22:16 boinc_mmap_file
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas       357 Oct  6 22:16 output.list
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas       620 Oct  6 22:16 runtime_log
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas    808960 Oct  6 22:16 result.tar.gz
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas        27 Oct  6 22:16 wrapper_checkpoint.txt
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas      8712 Oct  6 22:16 runtime_log.err
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas       651 Oct  6 22:16 8WaLDmczQP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv1MNDmLtA1kn.diag
[2025-10-06 22:16:13] -rw-r--r--. 1 boincer umatlas     22445 Oct  6 22:16 stderr.txt
[2025-10-06 22:16:13] HITS file was successfully produced:
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas 180711105 Oct  6 22:14 shared/HITS.pool.root.1
[2025-10-06 22:16:13]  *** Contents of shared directory: ***
[2025-10-06 22:16:13] total 389568
[2025-10-06 22:16:13] -rw-r--r--. 2 boincer umatlas 216797765 Oct  6 21:16 ATLAS.root_0
[2025-10-06 22:16:13] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 21:16 start_atlas.sh
[2025-10-06 22:16:13] -rw-r--r--. 2 boincer umatlas    565601 Oct  6 21:16 input.tar.gz
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas 180711105 Oct  6 22:14 HITS.pool.root.1
[2025-10-06 22:16:13] -rw-------. 1 boincer umatlas    808960 Oct  6 22:16 result.tar.gz
22:16:15 (1755911): run_atlas exited; CPU time 20398.307705
22:16:15 (1755911): called boinc_finish(0)

</stderr_txt>
]]>

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