Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:24:00 (858715): wrapper (7.7.26015): starting
18:24:00 (858715): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 18:24:00] Arguments: --nthreads 12
[2025-10-06 18:24:00] Threads: 12
[2025-10-06 18:24:00] Checking for CVMFS
[2025-10-06 18:24:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 18:24:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 18:24:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 18:24:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 18:24:03] 2.11.5.0 2129 24313 221388 151418 3 197 29374763 45568000 17967 130560 0 228560733 99.835 109873716 25005 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 18:24:03] CVMFS is ok
[2025-10-06 18:24:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 18:24:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 18:24:03] Further information can be found at the LHC@home message board.
[2025-10-06 18:24:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 18:24:03] Checking for apptainer binary...
[2025-10-06 18:24:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 18:24:03] Running /usr/bin/apptainer --version
[2025-10-06 18:24:04] apptainer version 1.4.1-1.el9
[2025-10-06 18:24:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 18:24:05] wns0037.triumf.lcg
[2025-10-06 18:24:05] apptainer works
[2025-10-06 18:24:05] Set ATHENA_PROC_NUMBER=12
[2025-10-06 18:24:05] Set ATHENA_CORE_NUMBER=12
[2025-10-06 18:24:05] Starting ATLAS job with PandaID=6833155641
[2025-10-06 18:24:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 18:31:30]  *** The last 200 lines of the pilot log: ***
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | WARNING  | wrong length of table data, x=[1759800455.0], y=[1575.0] (must be same and length>=4)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | could have reported an average CPU frequency of 2712 MHz (4 samples)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | ..............................
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . Timing measurements:
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . get job = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . initial setup = 6 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . payload setup = 50 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . stage-in = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . payload execution = 86 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . stage-out = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . log creation = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | ..............................
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 18:31:30] 2025-10-07 01:30:55,450 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833155641/pilotlog.txt
[2025-10-06 18:31:30] 2025-10-07 01:30:55,460 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 18:31:30] - Log from pilotlog.txt -
[2025-10-06 18:31:30] 2025-10-07 01:30:55,447 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6833155641/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | INFO     | extracted standard info from prmon json
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | WARNING  | wrong length of table data, x=[1759800455.0], y=[1575.0] (must be same and length>=4)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | could have reported an average CPU frequency of 2712 MHz (4 samples)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | ..............................
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . Timing measurements:
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . get job = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . initial setup = 6 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . payload setup = 50 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . stage-in = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . payload execution = 86 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . stage-out = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . log creation = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | ..............................
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 18:31:30] 2025-10-07 01:30:55,450 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833155641/pilotlog.txt
[2025-10-06 18:31:30] 2025-10-07 01:30:55,461 | WARNING  | 
[2025-10-06 18:31:30] [begin log extracts]
[2025-10-06 18:31:30] - Log from pilotlog.txt -
[2025-10-06 18:31:30] 2025-10-07 01:30:55,447 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6833155641/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | INFO     | extracted standard info from prmon json
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 18:31:30] 2025-10-07 01:30:55,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | WARNING  | wrong length of table data, x=[1759800455.0], y=[1575.0] (must be same and length>=4)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | could have reported an average CPU frequency of 2712 MHz (4 samples)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | ..............................
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . Timing measurements:
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . get job = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . initial setup = 6 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . payload setup = 50 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . stage-in = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . payload execution = 86 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . stage-out = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | . log creation = 0 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | ..............................
[2025-10-06 18:31:30] 2025-10-07 01:30:55,449 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 18:31:30] 2025-10-07 01:30:55,450 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833155641/pilotlog.txt
[2025-10-06 18:31:30] [end log extracts]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,461 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,462 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 18:31:30] 2025-10-07 01:30:55,567 | INFO     | 
[2025-10-06 18:31:30] 2025-10-07 01:30:55,567 | INFO     | job summary report
[2025-10-06 18:31:30] 2025-10-07 01:30:55,567 | INFO     | --------------------------------------------------
[2025-10-06 18:31:30] 2025-10-07 01:30:55,567 | INFO     | PanDA job id: 6833155641
[2025-10-06 18:31:30] 2025-10-07 01:30:55,567 | INFO     | task id: 46376905
[2025-10-06 18:31:30] 2025-10-07 01:30:55,567 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 18:28:21,081 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 18:31:30] 2025-10-07 01:30:55,567 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 18:31:30] 2025-10-07 01:30:55,567 | INFO     | pilot state: failed 
[2025-10-06 18:31:30] 2025-10-07 01:30:55,567 | INFO     | transexitcode: 65
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | exeerrorcode: 65
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | exitcode: 65
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | cpuconsumptiontime: 18 s
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | nevents: 0
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | neventsw: 0
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | pid: 869432
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | pgrp: 869432
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | corecount: 12
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | event service: False
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | sizes: {0: 2348817, 1: 2348845, 12: 2348845, 23: 2348873, 32: 2349163, 33: 2349191, 142: 2372717, 143: 2372693, 144: 2377041, 285: 2377179}
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | --------------------------------------------------
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | 
[2025-10-06 18:31:30] 2025-10-07 01:30:55,568 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 18:31:30] 2025-10-07 01:30:55,585 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,585 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,585 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,585 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 18:31:30] 2025-10-07 01:30:55,586 | INFO     | job 6833155641 has completed (purged errors)
[2025-10-06 18:31:30] 2025-10-07 01:30:55,615 | INFO     | overall cleanup function is called
[2025-10-06 18:31:30] 2025-10-07 01:30:56,622 | INFO     | --- collectZombieJob: --- 10, [869432]
[2025-10-06 18:31:30] 2025-10-07 01:30:56,622 | INFO     | zombie collector waiting for pid 869432
[2025-10-06 18:31:30] 2025-10-07 01:30:56,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 18:31:30] 2025-10-07 01:30:56,622 | INFO     | collected zombie processes
[2025-10-06 18:31:30] 2025-10-07 01:30:56,622 | INFO     | will attempt to kill all subprocesses of pid=869432
[2025-10-06 18:31:30] 2025-10-07 01:30:57,198 | INFO     | process IDs to be killed: [869432] (in reverse order)
[2025-10-06 18:31:30] 2025-10-07 01:30:57,398 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 18:31:30] 2025-10-07 01:30:57,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 18:31:30] 2025-10-07 01:30:57,414 | INFO     | did not find any defunct processes belonging to 869432
[2025-10-06 18:31:30] 2025-10-07 01:30:57,432 | INFO     | did not find any defunct processes belonging to 869432
[2025-10-06 18:31:30] 2025-10-07 01:30:57,432 | INFO     | ready for new job
[2025-10-06 18:31:30] 2025-10-07 01:30:57,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 18:31:30] 2025-10-07 01:30:57,433 | INFO     | ***************************************
[2025-10-06 18:31:30] 2025-10-07 01:30:57,434 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 18:31:30] 2025-10-07 01:30:57,434 | INFO     | ***************************************
[2025-10-06 18:31:30] 2025-10-07 01:30:57,434 | INFO     | 
[2025-10-06 18:31:30] 2025-10-07 01:30:57,435 | INFO     | architecture information:
[2025-10-06 18:31:30] 2025-10-07 01:30:57,439 | INFO     | executing command: cat /etc/os-release
[2025-10-06 18:31:30] 2025-10-07 01:30:57,472 | INFO     | cat /etc/os-release:
[2025-10-06 18:31:30] NAME="CentOS Linux"
[2025-10-06 18:31:30] VERSION="7 (Core)"
[2025-10-06 18:31:30] ID="centos"
[2025-10-06 18:31:30] ID_LIKE="rhel fedora"
[2025-10-06 18:31:30] VERSION_ID="7"
[2025-10-06 18:31:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 18:31:30] ANSI_COLOR="0;31"
[2025-10-06 18:31:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 18:31:30] HOME_URL="https://www.centos.org/"
[2025-10-06 18:31:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 18:31:30] 
[2025-10-06 18:31:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 18:31:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 18:31:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 18:31:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 18:31:30] 
[2025-10-06 18:31:30] 2025-10-07 01:30:57,472 | INFO     | ***************************************
[2025-10-06 18:31:30] 2025-10-07 01:30:57,976 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 18:31:30] 2025-10-07 01:30:58,038 | INFO     | sufficient remaining disk space (2121417097216 B)
[2025-10-06 18:31:30] 2025-10-07 01:30:58,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 18:31:30] 2025-10-07 01:30:58,039 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 18:31:30] 2025-10-07 01:30:58,039 | INFO     | update_server=False
[2025-10-06 18:31:30] 2025-10-07 01:30:58,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 18:31:30] 2025-10-07 01:30:58,145 | INFO     | all job control threads have been joined
[2025-10-06 18:31:30] 2025-10-07 01:30:58,282 | INFO     | all payload control threads have been joined
[2025-10-06 18:31:30] 2025-10-07 01:30:58,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 18:31:30] 2025-10-07 01:30:58,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 18:31:30] 2025-10-07 01:30:58,827 | INFO     | aborting loop
[2025-10-06 18:31:30] 2025-10-07 01:30:58,947 | INFO     | all data control threads have been joined
[2025-10-06 18:31:30] 2025-10-07 01:30:59,045 | INFO     | [job] retrieve thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:30:59,151 | INFO     | [job] control thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:30:59,288 | INFO     | [payload] control thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:30:59,335 | INFO     | [job] validate thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:30:59,336 | INFO     | [payload] validate_post thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:30:59,740 | INFO     | [payload] failed_post thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:30:59,833 | INFO     | [job] job monitor thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:30:59,953 | INFO     | [data] control thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:31:00,158 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:31:00,158 | INFO     | [data] copytool_in thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:31:00,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:31:00,223 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:31:00,393 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:31:00,506 | INFO     | [data] copytool_out thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:31:00,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 18:31:30] 2025-10-07 01:31:01,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 18:31:30] 2025-10-07 01:31:01,597 | INFO     | [job] queue monitor thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:31:05,215 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 18:31:30] 2025-10-07 01:31:18,442 | INFO     | [monitor] cgroup control has ended
[2025-10-06 18:31:30] 2025-10-07 01:31:19,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653851629376)>', '<ExcThread(monitor, started 139653311084288)>']
[2025-10-06 18:31:30] 2025-10-07 01:31:24,475 | INFO     | all workflow threads have been joined
[2025-10-06 18:31:30] 2025-10-07 01:31:24,475 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 18:31:30] 2025-10-07 01:31:24,475 | INFO     | traces error code: 0
[2025-10-06 18:31:30] 2025-10-07 01:31:24,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 18:31:30] 2025-10-07 01:31:28,755 | INFO     | PID=862572 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 18:31:30] 2025-10-07 01:31:28,755 | INFO     | .. there are 28 such processes running
[2025-10-06 18:31:30] 2025-10-07 01:31:28,756 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 18:31:30] 2025-10-07 01:31:28,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 18:31:30] 2025-10-07 01:31:28,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 18:31:30] 2025-10-07 01:31:28,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 18:31:30] 2025-10-07 01:31:28,756 | CRITICAL | thread 'MainThread' is not alive
[2025-10-06 18:31:30] 2025-10-07 01:31:28,756 | INFO     | [monitor] control thread has ended
[2025-10-06 18:31:30] 2025-10-07 01:31:29,421 [wrapper] ==== pilot stdout END ====
[2025-10-06 18:31:30] 2025-10-07 01:31:29,443 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 18:31:30] 2025-10-07 01:31:29,460 [wrapper] pilotpid: 862572
[2025-10-06 18:31:30] 2025-10-07 01:31:29,481 [wrapper] Pilot exit status: 0
[2025-10-06 18:31:30] 2025-10-07 01:31:29,588 [wrapper] pandaids: 6833155641
[2025-10-06 18:31:30] 2025-10-07 01:31:29,844 [wrapper] cleanup supervisor_pilot  862578 862573
[2025-10-06 18:31:30] 2025-10-07 01:31:29,907 [wrapper] Test setup, not cleaning
[2025-10-06 18:31:30] 2025-10-07 01:31:29,939 [wrapper] apfmon messages muted
[2025-10-06 18:31:30] 2025-10-07 01:31:29,989 [wrapper] ==== wrapper stdout END ====
[2025-10-06 18:31:30] 2025-10-07 01:31:30,107 [wrapper] ==== wrapper stderr END ====
[2025-10-06 18:31:30]  *** Error codes and diagnostics ***
[2025-10-06 18:31:30]     "exeErrorCode": 65,
[2025-10-06 18:31:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 18:31:30]     "pilotErrorCode": 1305,
[2025-10-06 18:31:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 18:31:30]  *** Listing of results directory ***
[2025-10-06 18:31:30] total 214528
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc    552446 Oct  6 16:19 pilot3.tar.gz
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc      5112 Oct  6 16:42 queuedata.json
[2025-10-06 18:31:30] -rwx------. 1 boinc boinc     36292 Oct  6 16:43 runpilot2-wrapper.sh
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc       100 Oct  6 18:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 18:31:30] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 18:23 run_atlas
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc       105 Oct  6 18:23 job.xml
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc      6594 Oct  6 18:24 init_data.xml
[2025-10-06 18:31:30] -rw-r--r--. 2 boinc boinc 215545163 Oct  6 18:24 EVNT.46376901._004543.pool.root.1
[2025-10-06 18:31:30] -rw-r--r--. 2 boinc boinc     15120 Oct  6 18:24 start_atlas.sh
[2025-10-06 18:31:30] drwxrwx--x. 2 boinc boinc      4096 Oct  6 18:24 shared
[2025-10-06 18:31:30] -rw-r--r--. 2 boinc boinc    565602 Oct  6 18:24 input.tar.gz
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc         0 Oct  6 18:24 boinc_lockfile
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc      2521 Oct  6 18:24 pandaJob.out
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc    975000 Oct  6 18:25 agis_schedconf.cvmfs.json
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc   1560401 Oct  6 18:25 agis_ddmendpoints.agis.ALL.json
[2025-10-06 18:31:30] drwx------. 4 boinc boinc      4096 Oct  6 18:25 pilot3
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc       523 Oct  6 18:28 boinc_task_state.xml
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc       952 Oct  6 18:28 memory_monitor_summary.json
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc     22933 Oct  6 18:28 log.46376905._122537.job.log.tgz.1
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc      8397 Oct  6 18:30 heartbeat.json
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc      8192 Oct  6 18:31 boinc_mmap_file
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc        22 Oct  6 18:31 wrapper_checkpoint.txt
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc       892 Oct  6 18:31 pilotlog.txt
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc        95 Oct  6 18:31 pilot_heartbeat.json
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc    100572 Oct  6 18:31 log.46376905._122537.job.log.1
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc       188 Oct  6 18:31 output.list
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc       620 Oct  6 18:31 runtime_log
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc    143360 Oct  6 18:31 result.tar.gz
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc      8528 Oct  6 18:31 runtime_log.err
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc       645 Oct  6 18:31 0OKMDm929P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbDVNDmktrisn.diag
[2025-10-06 18:31:30] -rw-r--r--. 1 boinc boinc     21800 Oct  6 18:31 stderr.txt
[2025-10-06 18:31:30] No HITS result produced
[2025-10-06 18:31:30]  *** Contents of shared directory: ***
[2025-10-06 18:31:30] total 211212
[2025-10-06 18:31:30] -rw-r--r--. 2 boinc boinc 215545163 Oct  6 18:24 ATLAS.root_0
[2025-10-06 18:31:30] -rw-r--r--. 2 boinc boinc     15120 Oct  6 18:24 start_atlas.sh
[2025-10-06 18:31:30] -rw-r--r--. 2 boinc boinc    565602 Oct  6 18:24 input.tar.gz
[2025-10-06 18:31:30] -rw-------. 1 boinc boinc    143360 Oct  6 18:31 result.tar.gz
18:31:32 (858715): run_atlas exited; CPU time 32.922445
18:31:32 (858715): called boinc_finish(0)

</stderr_txt>
]]>

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