Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
20:32:57 (2107641): wrapper (7.7.26015): starting
20:32:57 (2107641): wrapper: running run_atlas (--nthreads 4)
[2025-10-06 20:32:57] Arguments: --nthreads 4
[2025-10-06 20:32:57] Threads: 4
[2025-10-06 20:32:57] Checking for CVMFS
[2025-10-06 20:32:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 20:32:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 20:32:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 20:32:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 20:32:58] 2.11.3.0 1973660 5672 68596 151420 0 57 3555798 4096001 4585 130560 0 22951897 99.998 191503 637 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-06 20:32:58] CVMFS is ok
[2025-10-06 20:32:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 20:32:58] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-06 20:32:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-06 20:32:58] Further information can be found at the LHC@home message board.
[2025-10-06 20:32:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 20:32:58] Checking for apptainer binary...
[2025-10-06 20:32:58] apptainer is not installed, using version from CVMFS
[2025-10-06 20:32:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 20:32:58] officedc-System-Product-Name
[2025-10-06 20:32:58] apptainer works
[2025-10-06 20:32:58] Set ATHENA_PROC_NUMBER=4
[2025-10-06 20:32:58] Set ATHENA_CORE_NUMBER=4
[2025-10-06 20:32:58] Starting ATLAS job with PandaID=6829686111
[2025-10-06 20:32:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 22:05:28]  *** The last 200 lines of the pilot log: ***
[2025-10-06 22:05:28]  protocol_id=None
[2025-10-06 22:05:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-06 22:05:28]  replicas=None
[2025-10-06 22:05:28]  scope=mc23_13p6TeV
[2025-10-06 22:05:28]  status=None
[2025-10-06 22:05:28]  status_code=0
[2025-10-06 22:05:28]  storage_token=
[2025-10-06 22:05:28]  surl=/var/lib/boinc3/slots/1/PanDA_Pilot-6829686111/log.46376905._060368.job.log.tgz.1
[2025-10-06 22:05:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/98/log.46376905._060368.job.log.tgz.1
[2025-10-06 22:05:28]  workdir=None
[2025-10-06 22:05:28] ]
[2025-10-06 22:05:28] 2025-10-07 04:04:49,509 | INFO     | transferring file log.46376905._060368.job.log.tgz.1 from /var/lib/boinc3/slots/1/PanDA_Pilot-6829686111/log.46376905._060368.job.log.tgz.1 to /var/lib/boinc3/slot
[2025-10-06 22:05:28] 2025-10-07 04:04:49,509 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc3/slots/1/PanDA_Pilot-6829686111/log.46376905._060368.job.log.tgz.1 /var/lib/boinc3/slots/1/log.46376905._060368.j
[2025-10-06 22:05:28] 2025-10-07 04:04:49,530 | INFO     | adding to output.list: log.46376905._060368.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/98/log.46376905._060368.job.log.tg
[2025-10-06 22:05:28] 2025-10-07 04:04:49,531 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-06 22:05:28] 2025-10-07 04:04:49,531 | INFO     | summary of transferred files:
[2025-10-06 22:05:28] 2025-10-07 04:04:49,531 | INFO     |  -- lfn=log.46376905._060368.job.log.tgz.1, status_code=0, status=transferred
[2025-10-06 22:05:28] 2025-10-07 04:04:49,531 | INFO     | stage-out finished correctly
[2025-10-06 22:05:28] 2025-10-07 04:04:50,190 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-06 22:05:28] 2025-10-07 04:04:51,148 | INFO     | monitor loop #417: job 0:6829686111 is in state 'finished'
[2025-10-06 22:05:28] 2025-10-07 04:04:51,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 22:05:28] 2025-10-07 04:04:51,237 | INFO     | time since job start (5502s) is within the limit (172800.0s)
[2025-10-06 22:05:28] 2025-10-07 04:04:51,527 | INFO     | job 6829686111 has state=finished
[2025-10-06 22:05:28] 2025-10-07 04:04:51,528 | INFO     | preparing for final server update for job 6829686111 in state='finished'
[2025-10-06 22:05:28] 2025-10-07 04:04:51,528 | INFO     | this job has now completed (state=finished)
[2025-10-06 22:05:28] 2025-10-07 04:04:51,528 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-06 22:05:28] 2025-10-07 04:04:51,528 | INFO     | log transfer has been attempted: DONE
[2025-10-06 22:05:28] 2025-10-07 04:04:51,528 | INFO     | job 6829686111 has finished - writing final server update
[2025-10-06 22:05:28] 2025-10-07 04:04:51,529 | INFO     | total number of processed events: 400 (read)
[2025-10-06 22:05:28] 2025-10-07 04:04:51,531 | INFO     | executing command: lscpu
[2025-10-06 22:05:28] 2025-10-07 04:04:51,563 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-06 22:05:28] 2025-10-07 04:04:53,242 | INFO     | time since job start (5504s) is within the limit (172800.0s)
[2025-10-06 22:05:28] 2025-10-07 04:04:53,651 | INFO     | monitor loop #418: job 0:6829686111 is in state 'finished'
[2025-10-06 22:05:28] 2025-10-07 04:04:53,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 22:05:28] 2025-10-07 04:04:55,248 | INFO     | time since job start (5506s) is within the limit (172800.0s)
[2025-10-06 22:05:28] 2025-10-07 04:04:55,400 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-06 22:05:28] 2025-10-07 04:04:55,404 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3943.3556562500003
[2025-10-06 22:05:28] 2025-10-07 04:04:55,409 | INFO     | using path: /var/lib/boinc3/slots/1/PanDA_Pilot-6829686111/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 22:05:28] 2025-10-07 04:04:55,409 | INFO     | extracted standard info from prmon json
[2025-10-06 22:05:28] 2025-10-07 04:04:55,409 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 22:05:28] 2025-10-07 04:04:55,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 22:05:28] 2025-10-07 04:04:55,410 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 22:05:28] 2025-10-07 04:04:55,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 22:05:28] 2025-10-07 04:04:55,411 | INFO     | fitting pss+swap vs Time
[2025-10-06 22:05:28] 2025-10-07 04:04:55,411 | INFO     | sum of square deviations: 177275882.0
[2025-10-06 22:05:28] 2025-10-07 04:04:55,411 | INFO     | sum of deviations: -12422389896.0
[2025-10-06 22:05:28] 2025-10-07 04:04:55,411 | INFO     | mean x: 1759807217.0
[2025-10-06 22:05:28] 2025-10-07 04:04:55,411 | INFO     | mean y: 2390859.7710843375
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | -- intersect: 123318722132.45193
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | intersect: 123318722132.45193
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | chi2: 0.07836275561601562
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | -- intersect: 123318722132.45193
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | current memory leak: -70.07 B/s (using 83 data points, chi2=0.08)
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | could have reported an average CPU frequency of 3959 MHz (7 samples)
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | ..............................
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | . Timing measurements:
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | . get job = 0 s
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | . initial setup = 3 s
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | . payload setup = 4 s
[2025-10-06 22:05:28] 2025-10-07 04:04:55,412 | INFO     | . stage-in = 0 s
[2025-10-06 22:05:28] 2025-10-07 04:04:55,413 | INFO     | . payload execution = 5477 s
[2025-10-06 22:05:28] 2025-10-07 04:04:55,413 | INFO     | . stage-out = 0 s
[2025-10-06 22:05:28] 2025-10-07 04:04:55,413 | INFO     | . log creation = 0 s
[2025-10-06 22:05:28] 2025-10-07 04:04:55,413 | INFO     | ..............................
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | 
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | job summary report
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | --------------------------------------------------
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | PanDA job id: 6829686111
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | task id: 46376905
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | errors: (none)
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | pilot state: finished 
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | transexitcode: 0
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | exeerrorcode: 0
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | exeerrordiag: 
[2025-10-06 22:05:28] 2025-10-07 04:04:55,479 | INFO     | exitcode: 0
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | exitmsg: OK
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | cpuconsumptiontime: 21034 s
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | nevents: 400
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | neventsw: 0
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | pid: 2118138
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | pgrp: 2118138
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | corecount: 4
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | event service: False
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | sizes: {0: 2348646, 1: 2348845, 4: 2349107, 11: 2349135, 5485: 2375844, 5486: 2384844, 5487: 2385028, 5492: 2385222}
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | --------------------------------------------------
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | 
[2025-10-06 22:05:28] 2025-10-07 04:04:55,480 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/1
[2025-10-06 22:05:28] 2025-10-07 04:04:55,503 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | job 6829686111 has completed (purged errors)
[2025-10-06 22:05:28] 2025-10-07 04:04:55,504 | INFO     | overall cleanup function is called
[2025-10-06 22:05:28] 2025-10-07 04:04:56,512 | INFO     | --- collectZombieJob: --- 10, [2118138]
[2025-10-06 22:05:28] 2025-10-07 04:04:56,513 | INFO     | zombie collector waiting for pid 2118138
[2025-10-06 22:05:28] 2025-10-07 04:04:56,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 22:05:28] 2025-10-07 04:04:56,513 | INFO     | collected zombie processes
[2025-10-06 22:05:28] 2025-10-07 04:04:56,513 | INFO     | will attempt to kill all subprocesses of pid=2118138
[2025-10-06 22:05:28] 2025-10-07 04:04:56,654 | INFO     | process IDs to be killed: [2118138] (in reverse order)
[2025-10-06 22:05:28] 2025-10-07 04:04:56,733 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 22:05:28] 2025-10-07 04:04:56,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 22:05:28] 2025-10-07 04:04:56,738 | INFO     | did not find any defunct processes belonging to 2118138
[2025-10-06 22:05:28] 2025-10-07 04:04:56,742 | INFO     | did not find any defunct processes belonging to 2118138
[2025-10-06 22:05:28] 2025-10-07 04:04:56,742 | INFO     | ready for new job
[2025-10-06 22:05:28] 2025-10-07 04:04:56,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 22:05:28] 2025-10-07 04:04:56,744 | INFO     | ***************************************
[2025-10-06 22:05:28] 2025-10-07 04:04:56,744 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 22:05:28] 2025-10-07 04:04:56,744 | INFO     | ***************************************
[2025-10-06 22:05:28] 2025-10-07 04:04:56,744 | INFO     | 
[2025-10-06 22:05:28] 2025-10-07 04:04:56,746 | INFO     | architecture information:
[2025-10-06 22:05:28] 2025-10-07 04:04:56,746 | INFO     | executing command: cat /etc/os-release
[2025-10-06 22:05:28] 2025-10-07 04:04:56,763 | INFO     | cat /etc/os-release:
[2025-10-06 22:05:28] NAME="CentOS Linux"
[2025-10-06 22:05:28] VERSION="7 (Core)"
[2025-10-06 22:05:28] ID="centos"
[2025-10-06 22:05:28] ID_LIKE="rhel fedora"
[2025-10-06 22:05:28] VERSION_ID="7"
[2025-10-06 22:05:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 22:05:28] ANSI_COLOR="0;31"
[2025-10-06 22:05:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 22:05:28] HOME_URL="https://www.centos.org/"
[2025-10-06 22:05:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 22:05:28] 
[2025-10-06 22:05:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 22:05:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 22:05:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 22:05:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 22:05:28] 
[2025-10-06 22:05:28] 2025-10-07 04:04:56,764 | INFO     | ***************************************
[2025-10-06 22:05:28] 2025-10-07 04:04:57,267 | INFO     | executing command: df -mP /var/lib/boinc3/slots/1
[2025-10-06 22:05:28] 2025-10-07 04:04:57,295 | INFO     | sufficient remaining disk space (373266841600 B)
[2025-10-06 22:05:28] 2025-10-07 04:04:57,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 22:05:28] 2025-10-07 04:04:57,296 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 22:05:28] 2025-10-07 04:04:57,296 | INFO     | update_server=False
[2025-10-06 22:05:28] 2025-10-07 04:04:57,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 22:05:28] 2025-10-07 04:04:57,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 22:05:28] 2025-10-07 04:04:57,297 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 22:05:28] 2025-10-07 04:04:57,297 | INFO     | aborting loop
[2025-10-06 22:05:28] 2025-10-07 04:04:57,487 | INFO     | all data control threads have been joined
[2025-10-06 22:05:28] 2025-10-07 04:04:57,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 22:05:28] 2025-10-07 04:04:58,243 | INFO     | all payload control threads have been joined
[2025-10-06 22:05:28] 2025-10-07 04:04:58,301 | INFO     | [job] retrieve thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:58,302 | INFO     | [job] queue monitor thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:58,303 | INFO     | [job] job monitor thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:58,434 | INFO     | [data] copytool_in thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:58,447 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:58,464 | INFO     | all job control threads have been joined
[2025-10-06 22:05:28] 2025-10-07 04:04:58,493 | INFO     | [data] control thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:58,523 | INFO     | [payload] failed_post thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:58,917 | INFO     | [job] validate thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:59,140 | INFO     | [payload] validate_post thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:59,206 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:59,210 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:59,248 | INFO     | [payload] control thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:59,469 | INFO     | [job] control thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:04:59,620 | INFO     | [data] copytool_out thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:05:00,764 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 22:05:28] 2025-10-07 04:05:04,770 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:05:08,343 | INFO     | job.realtimelogging is not enabled
[2025-10-06 22:05:28] 2025-10-07 04:05:09,349 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 22:05:28] 2025-10-07 04:05:18,049 | INFO     | [monitor] cgroup control has ended
[2025-10-06 22:05:28] 2025-10-07 04:05:18,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126952867862336)>', '<ExcThread(monitor, started 126952379770624)>']
[2025-10-06 22:05:28] 2025-10-07 04:05:23,857 | INFO     | all workflow threads have been joined
[2025-10-06 22:05:28] 2025-10-07 04:05:23,857 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 22:05:28] 2025-10-07 04:05:23,857 | INFO     | traces error code: 0
[2025-10-06 22:05:28] 2025-10-07 04:05:23,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 22:05:28] 2025-10-07 04:05:28,458 | INFO     | PID=2111483 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 22:05:28] 2025-10-07 04:05:28,459 | INFO     | .. there are 6 such processes running
[2025-10-06 22:05:28] 2025-10-07 04:05:28,459 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 22:05:28] 2025-10-07 04:05:28,459 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 22:05:28] 2025-10-07 04:05:28,459 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 22:05:28] 2025-10-07 04:05:28,459 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 22:05:28] 2025-10-07 04:05:28,459 | INFO     | [monitor] control thread has ended
[2025-10-06 22:05:28] 2025-10-07 04:05:28,615 [wrapper] ==== pilot stdout END ====
[2025-10-06 22:05:28] 2025-10-07 04:05:28,617 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 22:05:28] 2025-10-07 04:05:28,620 [wrapper] pilotpid: 2111483
[2025-10-06 22:05:28] 2025-10-07 04:05:28,622 [wrapper] Pilot exit status: 0
[2025-10-06 22:05:28] 2025-10-07 04:05:28,631 [wrapper] pandaids: 6829686111
[2025-10-06 22:05:28] 2025-10-07 04:05:28,672 [wrapper] cleanup supervisor_pilot 2260287 2111484
[2025-10-06 22:05:28] 2025-10-07 04:05:28,674 [wrapper] Test setup, not cleaning
[2025-10-06 22:05:28] 2025-10-07 04:05:28,677 [wrapper] apfmon messages muted
[2025-10-06 22:05:28] 2025-10-07 04:05:28,680 [wrapper] ==== wrapper stdout END ====
[2025-10-06 22:05:28] 2025-10-07 04:05:28,682 [wrapper] ==== wrapper stderr END ====
[2025-10-06 22:05:28]  *** Error codes and diagnostics ***
[2025-10-06 22:05:28]     "exeErrorCode": 0,
[2025-10-06 22:05:28]     "exeErrorDiag": "",
[2025-10-06 22:05:28]     "pilotErrorCode": 0,
[2025-10-06 22:05:28]     "pilotErrorDiag": "",
[2025-10-06 22:05:28]  *** Listing of results directory ***
[2025-10-06 22:05:28] total 386192
[2025-10-06 22:05:28] -rw-r--r-- 1 boinc boinc    552446 Oct  4 07:04 pilot3.tar.gz
[2025-10-06 22:05:28] -rwx------ 1 boinc boinc     36292 Oct  4 07:13 runpilot2-wrapper.sh
[2025-10-06 22:05:28] -rw-r--r-- 1 boinc boinc      5112 Oct  4 07:13 queuedata.json
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc       100 Oct  6 20:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 22:05:28] -rwxr-xr-x 1 boinc boinc      7986 Oct  6 20:32 run_atlas
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc       105 Oct  6 20:32 job.xml
[2025-10-06 22:05:28] -rw-r--r-- 2 boinc boinc 217015831 Oct  6 20:32 EVNT.46376901._002174.pool.root.1
[2025-10-06 22:05:28] -rw-r--r-- 2 boinc boinc     15120 Oct  6 20:32 start_atlas.sh
[2025-10-06 22:05:28] drwxrwx--x 2 boinc boinc      4096 Oct  6 20:32 shared
[2025-10-06 22:05:28] -rw-r--r-- 2 boinc boinc    565600 Oct  6 20:32 input.tar.gz
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc      9753 Oct  6 20:32 init_data.xml
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc         0 Oct  6 20:32 boinc_lockfile
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc      2519 Oct  6 20:32 pandaJob.out
[2025-10-06 22:05:28] -rw------- 1 boinc boinc    974984 Oct  6 20:33 agis_schedconf.cvmfs.json
[2025-10-06 22:05:28] -rw------- 1 boinc boinc   1560401 Oct  6 20:33 agis_ddmendpoints.agis.ALL.json
[2025-10-06 22:05:28] drwx------ 4 boinc boinc      4096 Oct  6 20:33 pilot3
[2025-10-06 22:05:28] -rw------- 1 boinc boinc 172360562 Oct  6 22:04 HITS.46376905._060368.pool.root.1
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc       529 Oct  6 22:04 boinc_task_state.xml
[2025-10-06 22:05:28] -rw------- 1 boinc boinc      1025 Oct  6 22:04 memory_monitor_summary.json
[2025-10-06 22:05:28] -rw------- 1 boinc boinc    279408 Oct  6 22:04 log.46376905._060368.job.log.tgz.1
[2025-10-06 22:05:28] -rw------- 1 boinc boinc      7780 Oct  6 22:04 heartbeat.json
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc      8192 Oct  6 22:05 boinc_mmap_file
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc        27 Oct  6 22:05 wrapper_checkpoint.txt
[2025-10-06 22:05:28] -rw------- 1 boinc boinc       822 Oct  6 22:05 pilotlog.txt
[2025-10-06 22:05:28] -rw------- 1 boinc boinc        95 Oct  6 22:05 pilot_heartbeat.json
[2025-10-06 22:05:28] -rw------- 1 boinc boinc    813025 Oct  6 22:05 log.46376905._060368.job.log.1
[2025-10-06 22:05:28] -rw------- 1 boinc boinc       357 Oct  6 22:05 output.list
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc       620 Oct  6 22:05 runtime_log
[2025-10-06 22:05:28] -rw------- 1 boinc boinc   1116160 Oct  6 22:05 result.tar.gz
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc      8755 Oct  6 22:05 runtime_log.err
[2025-10-06 22:05:28] -rw------- 1 boinc boinc       657 Oct  6 22:05 4gsNDmBGHP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVVLNDmDJlqNn.diag
[2025-10-06 22:05:28] -rw-rw-r-- 1 boinc boinc     21869 Oct  6 22:05 stderr.txt
[2025-10-06 22:05:28] HITS file was successfully produced:
[2025-10-06 22:05:28] -rw------- 1 boinc boinc 172360562 Oct  6 22:04 shared/HITS.pool.root.1
[2025-10-06 22:05:28]  *** Contents of shared directory: ***
[2025-10-06 22:05:28] total 381928
[2025-10-06 22:05:28] -rw-r--r-- 2 boinc boinc 217015831 Oct  6 20:32 ATLAS.root_0
[2025-10-06 22:05:28] -rw-r--r-- 2 boinc boinc     15120 Oct  6 20:32 start_atlas.sh
[2025-10-06 22:05:28] -rw-r--r-- 2 boinc boinc    565600 Oct  6 20:32 input.tar.gz
[2025-10-06 22:05:28] -rw------- 1 boinc boinc 172360562 Oct  6 22:04 HITS.pool.root.1
[2025-10-06 22:05:28] -rw------- 1 boinc boinc   1116160 Oct  6 22:05 result.tar.gz
22:05:30 (2107641): run_atlas exited; CPU time 21082.671549
22:05:30 (2107641): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN