Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:20:41 (769658): wrapper (7.7.26015): starting
09:20:41 (769658): wrapper: running run_atlas (--nthreads 2)
[2025-10-07 09:20:41] Arguments: --nthreads 2
[2025-10-07 09:20:41] Threads: 2
[2025-10-07 09:20:41] Checking for CVMFS
[2025-10-07 09:20:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 09:20:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 09:20:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 09:20:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 09:20:41] 2.9.2.0 477799 1168 56888 151429 2 56 29248586 36864001 0 130560 0 769154 99.988 45198 1337 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-07 09:20:41] CVMFS is ok
[2025-10-07 09:20:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 09:20:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 09:20:41] Further information can be found at the LHC@home message board.
[2025-10-07 09:20:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 09:20:41] Checking for apptainer binary...
[2025-10-07 09:20:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 09:20:41] Running /usr/bin/apptainer --version
[2025-10-07 09:20:41] apptainer version 1.4.1-1.1
[2025-10-07 09:20:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 09:20:42] thA331
[2025-10-07 09:20:42] apptainer works
[2025-10-07 09:20:42] Set ATHENA_PROC_NUMBER=2
[2025-10-07 09:20:42] Set ATHENA_CORE_NUMBER=2
[2025-10-07 09:20:42] Starting ATLAS job with PandaID=6832971939
[2025-10-07 09:20:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 11:13:08]  *** The last 200 lines of the pilot log: ***
[2025-10-07 11:13:08] 2025-10-07 09:12:11,076 | INFO     | cat /etc/os-release:
[2025-10-07 11:13:08] NAME="CentOS Linux"
[2025-10-07 11:13:08] VERSION="7 (Core)"
[2025-10-07 11:13:08] ID="centos"
[2025-10-07 11:13:08] ID_LIKE="rhel fedora"
[2025-10-07 11:13:08] VERSION_ID="7"
[2025-10-07 11:13:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 11:13:08] ANSI_COLOR="0;31"
[2025-10-07 11:13:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 11:13:08] HOME_URL="https://www.centos.org/"
[2025-10-07 11:13:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 11:13:08] 
[2025-10-07 11:13:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 11:13:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 11:13:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 11:13:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 11:13:08] 
[2025-10-07 11:13:08] 2025-10-07 09:12:11,076 | INFO     | ***************************************
[2025-10-07 11:13:08] 2025-10-07 09:12:11,578 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-07 11:13:08] 2025-10-07 09:12:11,597 | INFO     | sufficient remaining disk space (231206813696 B)
[2025-10-07 11:13:08] 2025-10-07 09:12:11,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 11:13:08] 2025-10-07 09:12:11,598 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 11:13:08] 2025-10-07 09:12:11,598 | INFO     | update_server=False
[2025-10-07 11:13:08] 2025-10-07 09:12:11,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 11:13:08] 2025-10-07 09:12:11,599 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:13:08] 2025-10-07 09:12:11,599 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 11:13:08] 2025-10-07 09:12:11,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:13:08] 2025-10-07 09:12:11,922 | INFO     | aborting loop
[2025-10-07 11:13:08] 2025-10-07 09:12:12,006 | INFO     | all job control threads have been joined
[2025-10-07 11:13:08] 2025-10-07 09:12:12,604 | INFO     | [job] retrieve thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:12,605 | INFO     | [job] queue monitor thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:12,626 | INFO     | all data control threads have been joined
[2025-10-07 11:13:08] 2025-10-07 09:12:12,649 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:12,809 | INFO     | all payload control threads have been joined
[2025-10-07 11:13:08] 2025-10-07 09:12:12,928 | INFO     | [job] job monitor thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:12,981 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:13,012 | INFO     | [job] control thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:13,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 11:13:08] 2025-10-07 09:12:13,098 | INFO     | [data] copytool_in thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:13,382 | INFO     | [payload] failed_post thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:13,632 | INFO     | [data] control thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:13,811 | INFO     | [payload] control thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:13,967 | INFO     | [payload] validate_post thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:14,076 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:14,083 | INFO     | [job] validate thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:15,058 | INFO     | [data] copytool_out thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:15,606 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:22,409 | INFO     | job.realtimelogging is not enabled
[2025-10-07 11:13:08] 2025-10-07 09:12:23,413 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 11:13:08] 2025-10-07 09:12:42,643 | INFO     | PID=773369 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 11:13:08] 2025-10-07 09:12:42,643 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 11:13:08] 2025-10-07 09:12:42,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 11:13:08] 2025-10-07 09:12:42,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 11:13:08] 2025-10-07 09:13:03,104 | INFO     | [monitor] cgroup control has ended
[2025-10-07 11:13:08] 2025-10-07 09:13:03,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723061442368)>', '<ExcThread(monitor, started 139722559039232)>']
[2025-10-07 11:13:08] 2025-10-07 09:13:03,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 11:13:08] 2025-10-07 09:13:03,749 | INFO     | [monitor] control thread has ended
[2025-10-07 11:13:08] 2025-10-07 09:13:08,519 | INFO     | all workflow threads have been joined
[2025-10-07 11:13:08] 2025-10-07 09:13:08,520 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 11:13:08] 2025-10-07 09:13:08,520 | INFO     | traces error code: 0
[2025-10-07 11:13:08] 2025-10-07 09:13:08,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 11:13:08] 2025-10-07 09:13:08,563 [wrapper] ==== pilot stdout END ====
[2025-10-07 11:13:08] 2025-10-07 09:13:08,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 11:13:08] 2025-10-07 09:13:08,569 [wrapper] pilotpid: 773369
[2025-10-07 11:13:08] 2025-10-07 09:13:08,571 [wrapper] Pilot exit status: 0
[2025-10-07 11:13:08] 2025-10-07 09:13:08,578 [wrapper] pandaids: 6832971939
[2025-10-07 11:13:08] 2025-10-07 09:13:08,591 [wrapper] cleanup supervisor_pilot  793912 773370
[2025-10-07 11:13:08] 2025-10-07 09:13:08,593 [wrapper] Test setup, not cleaning
[2025-10-07 11:13:08] 2025-10-07 09:13:08,596 [wrapper] apfmon messages muted
[2025-10-07 11:13:08] 2025-10-07 09:13:08,598 [wrapper] ==== wrapper stdout END ====
[2025-10-07 11:13:08] 2025-10-07 09:13:08,600 [wrapper] ==== wrapper stderr END ====
[2025-10-07 11:13:08]  *** Error codes and diagnostics ***
[2025-10-07 11:13:08]     "exeErrorCode": 0,
[2025-10-07 11:13:08]     "exeErrorDiag": "",
[2025-10-07 11:13:08]     "pilotErrorCode": 0,
[2025-10-07 11:13:08]     "pilotErrorDiag": "",
[2025-10-07 11:13:08]  *** Listing of results directory ***
[2025-10-07 11:13:08] total 389864
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc    552446 Oct  6 21:47 pilot3.tar.gz
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc      5112 Oct  6 21:59 queuedata.json
[2025-10-07 11:13:08] -rwx------ 1 boinc boinc     36292 Oct  6 22:00 runpilot2-wrapper.sh
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc       100 Oct  7 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 11:13:08] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 09:20 run_atlas
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc       105 Oct  7 09:20 job.xml
[2025-10-07 11:13:08] -rw-r--r-- 2 boinc boinc 215441836 Oct  7 09:20 EVNT.46376901._004384.pool.root.1
[2025-10-07 11:13:08] -rw-r--r-- 2 boinc boinc    565609 Oct  7 09:20 input.tar.gz
[2025-10-07 11:13:08] -rw-r--r-- 2 boinc boinc     15120 Oct  7 09:20 start_atlas.sh
[2025-10-07 11:13:08] drwxrwx--x 2 boinc boinc      4096 Oct  7 09:20 shared
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc         0 Oct  7 09:20 boinc_setup_complete
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc      6206 Oct  7 09:20 init_data.xml
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc         0 Oct  7 09:20 boinc_lockfile
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc      2520 Oct  7 09:20 pandaJob.out
[2025-10-07 11:13:08] -rw------- 1 boinc boinc    974976 Oct  7 09:20 agis_schedconf.cvmfs.json
[2025-10-07 11:13:08] -rw------- 1 boinc boinc   1560401 Oct  7 09:20 agis_ddmendpoints.agis.ALL.json
[2025-10-07 11:13:08] drwx------ 4 boinc boinc      4096 Oct  7 09:20 pilot3
[2025-10-07 11:13:08] -rw------- 1 boinc boinc 177425513 Oct  7 11:11 HITS.46376905._118259.pool.root.1
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc       529 Oct  7 11:11 boinc_task_state.xml
[2025-10-07 11:13:08] -rw------- 1 boinc boinc      1017 Oct  7 11:11 memory_monitor_summary.json
[2025-10-07 11:13:08] -rw------- 1 boinc boinc    277365 Oct  7 11:11 log.46376905._118259.job.log.tgz.1
[2025-10-07 11:13:08] -rw------- 1 boinc boinc      7758 Oct  7 11:12 heartbeat.json
[2025-10-07 11:13:08] -rw------- 1 boinc boinc        95 Oct  7 11:12 pilot_heartbeat.json
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc      8192 Oct  7 11:12 boinc_mmap_file
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc        27 Oct  7 11:12 wrapper_checkpoint.txt
[2025-10-07 11:13:08] -rw------- 1 boinc boinc      4823 Oct  7 11:13 pilotlog.txt
[2025-10-07 11:13:08] -rw------- 1 boinc boinc    959705 Oct  7 11:13 log.46376905._118259.job.log.1
[2025-10-07 11:13:08] -rw------- 1 boinc boinc       357 Oct  7 11:13 output.list
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc       620 Oct  7 11:13 runtime_log
[2025-10-07 11:13:08] -rw------- 1 boinc boinc   1259520 Oct  7 11:13 result.tar.gz
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc      8777 Oct  7 11:13 runtime_log.err
[2025-10-07 11:13:08] -rw------- 1 boinc boinc       659 Oct  7 11:13 KeZLDmlY6P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtvJMDmIgGw7m.diag
[2025-10-07 11:13:08] -rw-r--r-- 1 boinc boinc      8874 Oct  7 11:13 stderr.txt
[2025-10-07 11:13:08] HITS file was successfully produced:
[2025-10-07 11:13:08] -rw------- 1 boinc boinc 177425513 Oct  7 11:11 shared/HITS.pool.root.1
[2025-10-07 11:13:08]  *** Contents of shared directory: ***
[2025-10-07 11:13:08] total 385472
[2025-10-07 11:13:08] -rw-r--r-- 2 boinc boinc 215441836 Oct  7 09:20 ATLAS.root_0
[2025-10-07 11:13:08] -rw-r--r-- 2 boinc boinc    565609 Oct  7 09:20 input.tar.gz
[2025-10-07 11:13:08] -rw-r--r-- 2 boinc boinc     15120 Oct  7 09:20 start_atlas.sh
[2025-10-07 11:13:08] -rw------- 1 boinc boinc 177425513 Oct  7 11:11 HITS.pool.root.1
[2025-10-07 11:13:08] -rw------- 1 boinc boinc   1259520 Oct  7 11:13 result.tar.gz
11:13:10 (769658): run_atlas exited; CPU time 12948.937656
11:13:10 (769658): called boinc_finish(0)

</stderr_txt>
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