Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:15:00 (2392746): wrapper (7.7.26015): starting
18:15:00 (2392746): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 18:15:00] Arguments: --nthreads 12
[2025-10-06 18:15:00] Threads: 12
[2025-10-06 18:15:00] Checking for CVMFS
[2025-10-06 18:15:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 18:15:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 18:15:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 18:15:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 18:15:01] 2.11.5.0 2859 23581 226048 151417 1 376 29021087 45568000 22005 130560 0 246563379 99.867 102857626 25394 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 18:15:01] CVMFS is ok
[2025-10-06 18:15:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 18:15:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 18:15:01] Further information can be found at the LHC@home message board.
[2025-10-06 18:15:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 18:15:01] Checking for apptainer binary...
[2025-10-06 18:15:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 18:15:01] Running /usr/bin/apptainer --version
[2025-10-06 18:15:01] apptainer version 1.4.1-1.el9
[2025-10-06 18:15:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 18:15:01] wns0069.triumf.lcg
[2025-10-06 18:15:01] apptainer works
[2025-10-06 18:15:01] Set ATHENA_PROC_NUMBER=12
[2025-10-06 18:15:01] Set ATHENA_CORE_NUMBER=12
[2025-10-06 18:15:01] Starting ATLAS job with PandaID=6833155551
[2025-10-06 18:15:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 18:18:45]  *** The last 200 lines of the pilot log: ***
[2025-10-06 18:18:45] 2025-10-07 01:18:12,265 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | WARNING  | wrong length of table data, x=[1759799750.0], y=[1978.0] (must be same and length>=4)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | could have reported an average CPU frequency of 2648 MHz (4 samples)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | ..............................
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . Timing measurements:
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . get job = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . initial setup = 2 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . payload setup = 6 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . stage-in = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . payload execution = 19 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . stage-out = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | . log creation = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | ..............................
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833155551/pilotlog.txt
[2025-10-06 18:18:45] 2025-10-07 01:18:12,284 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 18:18:45] - Log from pilotlog.txt -
[2025-10-06 18:18:45] 2025-10-07 01:18:12,264 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 18:18:45] 2025-10-07 01:18:12,264 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 18:18:45] 2025-10-07 01:18:12,265 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 18:18:45] 2025-10-07 01:18:12,265 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 18:18:45] 2025-10-07 01:18:12,265 | WARNING  | found no stored workdir sizes
[2025-10-06 18:18:45] 2025-10-07 01:18:12,265 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | WARNING  | wrong length of table data, x=[1759799750.0], y=[1978.0] (must be same and length>=4)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | could have reported an average CPU frequency of 2648 MHz (4 samples)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | ..............................
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . Timing measurements:
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . get job = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . initial setup = 2 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . payload setup = 6 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . stage-in = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . payload execution = 19 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . stage-out = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | . log creation = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | ..............................
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833155551/pilotlog.txt
[2025-10-06 18:18:45] 2025-10-07 01:18:12,284 | WARNING  | 
[2025-10-06 18:18:45] [begin log extracts]
[2025-10-06 18:18:45] - Log from pilotlog.txt -
[2025-10-06 18:18:45] 2025-10-07 01:18:12,264 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 18:18:45] 2025-10-07 01:18:12,264 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 18:18:45] 2025-10-07 01:18:12,265 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 18:18:45] 2025-10-07 01:18:12,265 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 18:18:45] 2025-10-07 01:18:12,265 | WARNING  | found no stored workdir sizes
[2025-10-06 18:18:45] 2025-10-07 01:18:12,265 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | WARNING  | wrong length of table data, x=[1759799750.0], y=[1978.0] (must be same and length>=4)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | could have reported an average CPU frequency of 2648 MHz (4 samples)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | ..............................
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . Timing measurements:
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . get job = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . initial setup = 2 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . payload setup = 6 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . stage-in = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . payload execution = 19 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,266 | INFO     | . stage-out = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | . log creation = 0 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | ..............................
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 18:18:45] 2025-10-07 01:18:12,267 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6833155551/pilotlog.txt
[2025-10-06 18:18:45] [end log extracts]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,284 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,285 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 18:18:45] 2025-10-07 01:18:12,806 | INFO     | 
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | job summary report
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | --------------------------------------------------
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | PanDA job id: 6833155551
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | task id: 46376905
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 18:15:58,846 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | pilot state: failed 
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | transexitcode: 65
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | exeerrorcode: 65
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | exitcode: 65
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | cpuconsumptiontime: 17 s
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | nevents: 0
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | neventsw: 0
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | pid: 2403003
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | pgrp: 2403003
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | corecount: 12
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | event service: False
[2025-10-06 18:18:45] 2025-10-07 01:18:12,808 | INFO     | sizes: {0: 2348646, 1: 2348845, 7: 2349107, 12: 2349135, 29: 2372386, 30: 2372362, 31: 2376810, 33: 2376838, 156: 2377032}
[2025-10-06 18:18:45] 2025-10-07 01:18:12,809 | INFO     | --------------------------------------------------
[2025-10-06 18:18:45] 2025-10-07 01:18:12,809 | INFO     | 
[2025-10-06 18:18:45] 2025-10-07 01:18:12,809 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,849 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 18:18:45] 2025-10-07 01:18:12,849 | INFO     | job 6833155551 has completed (purged errors)
[2025-10-06 18:18:45] 2025-10-07 01:18:12,849 | INFO     | overall cleanup function is called
[2025-10-06 18:18:45] 2025-10-07 01:18:13,858 | INFO     | --- collectZombieJob: --- 10, [2403003]
[2025-10-06 18:18:45] 2025-10-07 01:18:13,859 | INFO     | zombie collector waiting for pid 2403003
[2025-10-06 18:18:45] 2025-10-07 01:18:13,859 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 18:18:45] 2025-10-07 01:18:13,859 | INFO     | collected zombie processes
[2025-10-06 18:18:45] 2025-10-07 01:18:13,859 | INFO     | will attempt to kill all subprocesses of pid=2403003
[2025-10-06 18:18:45] 2025-10-07 01:18:14,454 | INFO     | process IDs to be killed: [2403003] (in reverse order)
[2025-10-06 18:18:45] 2025-10-07 01:18:14,593 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 18:18:45] 2025-10-07 01:18:14,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 18:18:45] 2025-10-07 01:18:14,624 | INFO     | did not find any defunct processes belonging to 2403003
[2025-10-06 18:18:45] 2025-10-07 01:18:14,653 | INFO     | did not find any defunct processes belonging to 2403003
[2025-10-06 18:18:45] 2025-10-07 01:18:14,653 | INFO     | ready for new job
[2025-10-06 18:18:45] 2025-10-07 01:18:14,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 18:18:45] 2025-10-07 01:18:14,658 | INFO     | ***************************************
[2025-10-06 18:18:45] 2025-10-07 01:18:14,659 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 18:18:45] 2025-10-07 01:18:14,659 | INFO     | ***************************************
[2025-10-06 18:18:45] 2025-10-07 01:18:14,659 | INFO     | 
[2025-10-06 18:18:45] 2025-10-07 01:18:14,661 | INFO     | architecture information:
[2025-10-06 18:18:45] 2025-10-07 01:18:14,666 | INFO     | executing command: cat /etc/os-release
[2025-10-06 18:18:45] 2025-10-07 01:18:14,713 | INFO     | cat /etc/os-release:
[2025-10-06 18:18:45] NAME="CentOS Linux"
[2025-10-06 18:18:45] VERSION="7 (Core)"
[2025-10-06 18:18:45] ID="centos"
[2025-10-06 18:18:45] ID_LIKE="rhel fedora"
[2025-10-06 18:18:45] VERSION_ID="7"
[2025-10-06 18:18:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 18:18:45] ANSI_COLOR="0;31"
[2025-10-06 18:18:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 18:18:45] HOME_URL="https://www.centos.org/"
[2025-10-06 18:18:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 18:18:45] 
[2025-10-06 18:18:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 18:18:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 18:18:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 18:18:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 18:18:45] 
[2025-10-06 18:18:45] 2025-10-07 01:18:14,713 | INFO     | ***************************************
[2025-10-06 18:18:45] 2025-10-07 01:18:15,216 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 18:18:45] 2025-10-07 01:18:15,272 | INFO     | sufficient remaining disk space (1147298381824 B)
[2025-10-06 18:18:45] 2025-10-07 01:18:15,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 18:18:45] 2025-10-07 01:18:15,272 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 18:18:45] 2025-10-07 01:18:15,272 | INFO     | update_server=False
[2025-10-06 18:18:45] 2025-10-07 01:18:15,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 18:18:45] 2025-10-07 01:18:15,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 18:18:45] 2025-10-07 01:18:15,581 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-06 18:18:45] 2025-10-07 01:18:15,582 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-06 18:18:45] 2025-10-07 01:18:15,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 18:18:45] 2025-10-07 01:18:15,582 | INFO     | will abort loop
[2025-10-06 18:18:45] 2025-10-07 01:18:15,806 | INFO     | all job control threads have been joined
[2025-10-06 18:18:45] 2025-10-07 01:18:15,999 | INFO     | all payload control threads have been joined
[2025-10-06 18:18:45] 2025-10-07 01:18:16,000 | INFO     | all data control threads have been joined
[2025-10-06 18:18:45] 2025-10-07 01:18:16,278 | INFO     | [job] retrieve thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:16,371 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:16,587 | INFO     | [job] job monitor thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:16,635 | INFO     | [data] copytool_in thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:16,814 | INFO     | [job] control thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:16,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:16,888 | INFO     | [payload] validate_post thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:17,005 | INFO     | [payload] control thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:17,008 | INFO     | [data] control thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:17,180 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:17,186 | INFO     | [job] validate thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:17,210 | INFO     | [payload] failed_post thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:17,279 | INFO     | [data] copytool_out thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:17,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 18:18:45] 2025-10-07 01:18:17,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 18:18:45] 2025-10-07 01:18:17,480 | INFO     | [monitor] cgroup control has ended
[2025-10-06 18:18:45] 2025-10-07 01:18:17,519 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:18,453 | INFO     | [job] queue monitor thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:21,400 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 18:18:45] 2025-10-07 01:18:22,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230474762048)>', '<ExcThread(monitor, started 140229767833344)>']
[2025-10-06 18:18:45] 2025-10-07 01:18:27,469 | INFO     | all workflow threads have been joined
[2025-10-06 18:18:45] 2025-10-07 01:18:27,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 18:18:45] 2025-10-07 01:18:27,470 | INFO     | traces error code: 0
[2025-10-06 18:18:45] 2025-10-07 01:18:27,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 18:18:45] 2025-10-07 01:18:44,970 | INFO     | PID=2396426 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 18:18:45] 2025-10-07 01:18:44,971 | INFO     | .. there are 35 such processes running
[2025-10-06 18:18:45] 2025-10-07 01:18:44,972 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 18:18:45] 2025-10-07 01:18:44,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 18:18:45] 2025-10-07 01:18:44,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 18:18:45] 2025-10-07 01:18:44,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 18:18:45] 2025-10-07 01:18:44,972 | INFO     | [monitor] control thread has ended
[2025-10-06 18:18:45] 2025-10-07 01:18:45,391 [wrapper] ==== pilot stdout END ====
[2025-10-06 18:18:45] 2025-10-07 01:18:45,393 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 18:18:45] 2025-10-07 01:18:45,395 [wrapper] pilotpid: 2396426
[2025-10-06 18:18:45] 2025-10-07 01:18:45,396 [wrapper] Pilot exit status: 0
[2025-10-06 18:18:45] 2025-10-07 01:18:45,405 [wrapper] pandaids: 6833155551
[2025-10-06 18:18:45] 2025-10-07 01:18:45,452 [wrapper] cleanup supervisor_pilot 2396432 2396427
[2025-10-06 18:18:45] 2025-10-07 01:18:45,454 [wrapper] Test setup, not cleaning
[2025-10-06 18:18:45] 2025-10-07 01:18:45,456 [wrapper] apfmon messages muted
[2025-10-06 18:18:45] 2025-10-07 01:18:45,458 [wrapper] ==== wrapper stdout END ====
[2025-10-06 18:18:45] 2025-10-07 01:18:45,460 [wrapper] ==== wrapper stderr END ====
[2025-10-06 18:18:45]  *** Error codes and diagnostics ***
[2025-10-06 18:18:45]     "exeErrorCode": 65,
[2025-10-06 18:18:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 18:18:45]     "pilotErrorCode": 1305,
[2025-10-06 18:18:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 18:18:45]  *** Listing of results directory ***
[2025-10-06 18:18:45] total 214228
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc    552446 Oct  6 16:19 pilot3.tar.gz
[2025-10-06 18:18:45] -rwx------. 1 boinc boinc     36292 Oct  6 16:37 runpilot2-wrapper.sh
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc      5112 Oct  6 16:37 queuedata.json
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc       100 Oct  6 18:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 18:18:45] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 18:15 run_atlas
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc       105 Oct  6 18:15 job.xml
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc      6594 Oct  6 18:15 init_data.xml
[2025-10-06 18:18:45] -rw-r--r--. 2 boinc boinc 215278618 Oct  6 18:15 EVNT.46376901._004539.pool.root.1
[2025-10-06 18:18:45] -rw-r--r--. 2 boinc boinc     15120 Oct  6 18:15 start_atlas.sh
[2025-10-06 18:18:45] drwxrwx--x. 2 boinc boinc      4096 Oct  6 18:15 shared
[2025-10-06 18:18:45] -rw-r--r--. 2 boinc boinc    565602 Oct  6 18:15 input.tar.gz
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc         0 Oct  6 18:15 boinc_lockfile
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc      2521 Oct  6 18:15 pandaJob.out
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc    974984 Oct  6 18:15 agis_schedconf.cvmfs.json
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc   1560401 Oct  6 18:15 agis_ddmendpoints.agis.ALL.json
[2025-10-06 18:18:45] drwx------. 4 boinc boinc      4096 Oct  6 18:15 pilot3
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc       954 Oct  6 18:16 memory_monitor_summary.json
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc     21088 Oct  6 18:16 log.46376905._122447.job.log.tgz.1
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc      8403 Oct  6 18:18 heartbeat.json
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc       523 Oct  6 18:18 boinc_task_state.xml
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc      8192 Oct  6 18:18 boinc_mmap_file
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc        22 Oct  6 18:18 wrapper_checkpoint.txt
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc        95 Oct  6 18:18 pilot_heartbeat.json
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc       823 Oct  6 18:18 pilotlog.txt
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc     83373 Oct  6 18:18 log.46376905._122447.job.log.1
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc       188 Oct  6 18:18 output.list
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc       620 Oct  6 18:18 runtime_log
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc    122880 Oct  6 18:18 result.tar.gz
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc      8528 Oct  6 18:18 runtime_log.err
[2025-10-06 18:18:45] -rw-------. 1 boinc boinc       646 Oct  6 18:18 lfMODmpw9P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnPKMDm1CiiMn.diag
[2025-10-06 18:18:45] -rw-r--r--. 1 boinc boinc     21699 Oct  6 18:18 stderr.txt
[2025-10-06 18:18:46] No HITS result produced
[2025-10-06 18:18:46]  *** Contents of shared directory: ***
[2025-10-06 18:18:46] total 210928
[2025-10-06 18:18:46] -rw-r--r--. 2 boinc boinc 215278618 Oct  6 18:15 ATLAS.root_0
[2025-10-06 18:18:46] -rw-r--r--. 2 boinc boinc     15120 Oct  6 18:15 start_atlas.sh
[2025-10-06 18:18:46] -rw-r--r--. 2 boinc boinc    565602 Oct  6 18:15 input.tar.gz
[2025-10-06 18:18:46] -rw-------. 1 boinc boinc    122880 Oct  6 18:18 result.tar.gz
18:18:47 (2392746): run_atlas exited; CPU time 23.656708
18:18:47 (2392746): called boinc_finish(0)

</stderr_txt>
]]>

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