Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:51:49 (318293): wrapper (7.7.26015): starting
21:51:49 (318293): wrapper: running run_atlas (--nthreads 10)
[2025-10-06 21:51:49] Arguments: --nthreads 10
[2025-10-06 21:51:49] Threads: 10
[2025-10-06 21:51:49] Checking for CVMFS
[2025-10-06 21:51:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 21:51:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 21:51:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 21:51:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 21:51:51] 2.13.2.0 7443 29351 139112 151418 2 498 33440723 40960001 58450 16776704 0 278676784 99.797 143088067 34153 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-06 21:51:51] CVMFS is ok
[2025-10-06 21:51:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 21:51:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 21:51:51] Further information can be found at the LHC@home message board.
[2025-10-06 21:51:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 21:51:51] Checking for apptainer binary...
[2025-10-06 21:51:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 21:51:51] Running /usr/bin/apptainer --version
[2025-10-06 21:51:51] apptainer version 1.4.2-1.el9
[2025-10-06 21:51:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 21:51:51] c8-16-1.aglt2.org
[2025-10-06 21:51:51] apptainer works
[2025-10-06 21:51:51] Set ATHENA_PROC_NUMBER=10
[2025-10-06 21:51:51] Set ATHENA_CORE_NUMBER=10
[2025-10-06 21:51:51] Starting ATLAS job with PandaID=6830226193
[2025-10-06 21:51:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 23:14:34]  *** The last 200 lines of the pilot log: ***
[2025-10-06 23:14:34] 2025-10-07 03:13:35,813 | INFO     | time since job start (4836s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:36,153 | INFO     | monitor loop #306: job 0:6830226193 is in state 'finished'
[2025-10-06 23:14:34] 2025-10-07 03:13:36,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 23:14:34] 2025-10-07 03:13:37,819 | INFO     | time since job start (4838s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:38,665 | INFO     | monitor loop #307: job 0:6830226193 is in state 'finished'
[2025-10-06 23:14:34] 2025-10-07 03:13:38,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 23:14:34] 2025-10-07 03:13:39,826 | INFO     | time since job start (4840s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:41,183 | INFO     | monitor loop #308: job 0:6830226193 is in state 'finished'
[2025-10-06 23:14:34] 2025-10-07 03:13:41,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 23:14:34] 2025-10-07 03:13:41,833 | INFO     | time since job start (4842s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:43,720 | INFO     | monitor loop #309: job 0:6830226193 is in state 'finished'
[2025-10-06 23:14:34] 2025-10-07 03:13:43,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 23:14:34] 2025-10-07 03:13:43,847 | INFO     | time since job start (4844s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:45,870 | INFO     | time since job start (4846s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:46,229 | INFO     | monitor loop #310: job 0:6830226193 is in state 'finished'
[2025-10-06 23:14:34] 2025-10-07 03:13:46,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 23:14:34] 2025-10-07 03:13:47,877 | INFO     | time since job start (4848s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:48,734 | INFO     | monitor loop #311: job 0:6830226193 is in state 'finished'
[2025-10-06 23:14:34] 2025-10-07 03:13:48,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 23:14:34] 2025-10-07 03:13:49,884 | INFO     | time since job start (4850s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:51,242 | INFO     | monitor loop #312: job 0:6830226193 is in state 'finished'
[2025-10-06 23:14:34] 2025-10-07 03:13:51,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 23:14:34] 2025-10-07 03:13:51,904 | INFO     | time since job start (4852s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:53,747 | INFO     | monitor loop #313: job 0:6830226193 is in state 'finished'
[2025-10-06 23:14:34] 2025-10-07 03:13:53,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 23:14:34] 2025-10-07 03:13:53,913 | INFO     | time since job start (4854s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:55,927 | INFO     | time since job start (4856s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:56,255 | INFO     | monitor loop #314: job 0:6830226193 is in state 'finished'
[2025-10-06 23:14:34] 2025-10-07 03:13:56,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 23:14:34] 2025-10-07 03:13:57,649 | INFO     | PID=327302 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 23:14:34] 2025-10-07 03:13:57,649 | INFO     | .. there are 76 such processes running
[2025-10-06 23:14:34] 2025-10-07 03:13:58,649 | INFO     | time since job start (4859s) is within the limit (172800.0s)
[2025-10-06 23:14:34] 2025-10-07 03:13:58,759 | INFO     | monitor loop #315: job 0:6830226193 is in state 'finished'
[2025-10-06 23:14:34] 2025-10-07 03:13:58,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 23:14:34] 2025-10-07 03:13:58,810 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-06 23:14:34] 2025-10-07 03:13:58,838 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.221734375006
[2025-10-06 23:14:34] 2025-10-07 03:13:58,867 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6830226193/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 23:14:34] 2025-10-07 03:13:58,867 | INFO     | extracted standard info from prmon json
[2025-10-06 23:14:34] 2025-10-07 03:13:58,867 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 23:14:34] 2025-10-07 03:13:58,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 23:14:34] 2025-10-07 03:13:58,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 23:14:34] 2025-10-07 03:13:58,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | fitting pss+swap vs Time
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | sum of square deviations: 106341761.27142869
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | sum of deviations: -100823324.91428572
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | mean x: 1759804514.557143
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | mean y: 2564654.2285714285
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | -- intersect: 1671046915.905127
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | intersect: 1671046915.905127
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | chi2: 0.03605114433579808
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | -- intersect: 1671046915.905127
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | current memory leak: -0.95 B/s (using 70 data points, chi2=0.04)
[2025-10-06 23:14:34] 2025-10-07 03:13:58,869 | INFO     | could have reported an average CPU frequency of 3798 MHz (6 samples)
[2025-10-06 23:14:34] 2025-10-07 03:13:58,870 | INFO     | ..............................
[2025-10-06 23:14:34] 2025-10-07 03:13:58,870 | INFO     | . Timing measurements:
[2025-10-06 23:14:34] 2025-10-07 03:13:58,870 | INFO     | . get job = 0 s
[2025-10-06 23:14:34] 2025-10-07 03:13:58,870 | INFO     | . initial setup = 4 s
[2025-10-06 23:14:34] 2025-10-07 03:13:58,870 | INFO     | . payload setup = 35 s
[2025-10-06 23:14:34] 2025-10-07 03:13:58,870 | INFO     | . stage-in = 0 s
[2025-10-06 23:14:34] 2025-10-07 03:13:58,870 | INFO     | . payload execution = 4721 s
[2025-10-06 23:14:34] 2025-10-07 03:13:58,870 | INFO     | . stage-out = 1 s
[2025-10-06 23:14:34] 2025-10-07 03:13:58,870 | INFO     | . log creation = 0 s
[2025-10-06 23:14:34] 2025-10-07 03:13:58,870 | INFO     | ..............................
[2025-10-06 23:14:34] 2025-10-07 03:13:59,232 | INFO     | 
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | job summary report
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | --------------------------------------------------
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | PanDA job id: 6830226193
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | task id: 46376905
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | errors: (none)
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | pilot state: finished 
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | transexitcode: 0
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | exeerrorcode: 0
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | exeerrordiag: 
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | exitcode: 0
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | exitmsg: OK
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | cpuconsumptiontime: 20345 s
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | nevents: 400
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | neventsw: 0
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | pid: 350477
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | pgrp: 350477
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | corecount: 10
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | event service: False
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | sizes: {0: 2348816, 11: 2348816, 22: 2348844, 29: 2349134, 32: 2349162, 4761: 2375321, 4762: 2375448, 4765: 2384558, 4799: 2384696}
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | --------------------------------------------------
[2025-10-06 23:14:34] 2025-10-07 03:13:59,233 | INFO     | 
[2025-10-06 23:14:34] 2025-10-07 03:13:59,234 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-06 23:14:34] 2025-10-07 03:13:59,295 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,295 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,295 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,295 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | job 6830226193 has completed (purged errors)
[2025-10-06 23:14:34] 2025-10-07 03:13:59,296 | INFO     | overall cleanup function is called
[2025-10-06 23:14:34] 2025-10-07 03:14:00,305 | INFO     | --- collectZombieJob: --- 10, [350477]
[2025-10-06 23:14:34] 2025-10-07 03:14:00,305 | INFO     | zombie collector waiting for pid 350477
[2025-10-06 23:14:34] 2025-10-07 03:14:00,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 23:14:34] 2025-10-07 03:14:00,305 | INFO     | collected zombie processes
[2025-10-06 23:14:34] 2025-10-07 03:14:00,305 | INFO     | will attempt to kill all subprocesses of pid=350477
[2025-10-06 23:14:34] 2025-10-07 03:14:02,077 | INFO     | process IDs to be killed: [350477] (in reverse order)
[2025-10-06 23:14:34] 2025-10-07 03:14:02,531 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 23:14:34] 2025-10-07 03:14:02,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 23:14:34] 2025-10-07 03:14:02,646 | INFO     | did not find any defunct processes belonging to 350477
[2025-10-06 23:14:34] 2025-10-07 03:14:02,813 | INFO     | did not find any defunct processes belonging to 350477
[2025-10-06 23:14:34] 2025-10-07 03:14:02,813 | INFO     | ready for new job
[2025-10-06 23:14:34] 2025-10-07 03:14:02,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 23:14:34] 2025-10-07 03:14:02,815 | INFO     | ***************************************
[2025-10-06 23:14:34] 2025-10-07 03:14:02,815 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 23:14:34] 2025-10-07 03:14:02,815 | INFO     | ***************************************
[2025-10-06 23:14:34] 2025-10-07 03:14:02,815 | INFO     | 
[2025-10-06 23:14:34] 2025-10-07 03:14:02,853 | INFO     | architecture information:
[2025-10-06 23:14:34] 2025-10-07 03:14:02,871 | INFO     | executing command: cat /etc/os-release
[2025-10-06 23:14:34] 2025-10-07 03:14:02,949 | INFO     | cat /etc/os-release:
[2025-10-06 23:14:34] NAME="CentOS Linux"
[2025-10-06 23:14:34] VERSION="7 (Core)"
[2025-10-06 23:14:34] ID="centos"
[2025-10-06 23:14:34] ID_LIKE="rhel fedora"
[2025-10-06 23:14:34] VERSION_ID="7"
[2025-10-06 23:14:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 23:14:34] ANSI_COLOR="0;31"
[2025-10-06 23:14:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 23:14:34] HOME_URL="https://www.centos.org/"
[2025-10-06 23:14:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 23:14:34] 
[2025-10-06 23:14:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 23:14:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 23:14:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 23:14:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 23:14:34] 
[2025-10-06 23:14:34] 2025-10-07 03:14:02,949 | INFO     | ***************************************
[2025-10-06 23:14:34] 2025-10-07 03:14:03,453 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-06 23:14:34] 2025-10-07 03:14:03,531 | INFO     | sufficient remaining disk space (170244702208 B)
[2025-10-06 23:14:34] 2025-10-07 03:14:03,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 23:14:34] 2025-10-07 03:14:03,531 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 23:14:34] 2025-10-07 03:14:03,531 | INFO     | update_server=False
[2025-10-06 23:14:34] 2025-10-07 03:14:03,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 23:14:34] 2025-10-07 03:14:03,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 23:14:34] 2025-10-07 03:14:03,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 23:14:34] 2025-10-07 03:14:03,556 | INFO     | all data control threads have been joined
[2025-10-06 23:14:34] 2025-10-07 03:14:03,779 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-06 23:14:34] 2025-10-07 03:14:03,780 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-06 23:14:34] 2025-10-07 03:14:03,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 23:14:34] 2025-10-07 03:14:03,780 | INFO     | will abort loop
[2025-10-06 23:14:34] 2025-10-07 03:14:03,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 23:14:34] 2025-10-07 03:14:04,088 | INFO     | all job control threads have been joined
[2025-10-06 23:14:34] 2025-10-07 03:14:04,273 | INFO     | all payload control threads have been joined
[2025-10-06 23:14:34] 2025-10-07 03:14:04,537 | INFO     | [job] retrieve thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:04,564 | INFO     | [data] control thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:04,583 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:04,717 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:04,785 | INFO     | [job] job monitor thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:05,001 | INFO     | [job] queue monitor thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:05,094 | INFO     | [job] control thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:05,108 | INFO     | [payload] validate_post thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:05,114 | INFO     | [data] copytool_in thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:05,210 | INFO     | [payload] failed_post thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:05,288 | INFO     | [payload] control thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:05,426 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:05,548 | INFO     | [data] copytool_out thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:05,758 | INFO     | [job] validate thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:06,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:07,497 | INFO     | [monitor] cgroup control has ended
[2025-10-06 23:14:34] 2025-10-07 03:14:07,551 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 23:14:34] 2025-10-07 03:14:09,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703132608320)>', '<ExcThread(monitor, started 139702787102464)>']
[2025-10-06 23:14:34] 2025-10-07 03:14:14,350 | INFO     | all workflow threads have been joined
[2025-10-06 23:14:34] 2025-10-07 03:14:14,351 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 23:14:34] 2025-10-07 03:14:14,351 | INFO     | traces error code: 0
[2025-10-06 23:14:34] 2025-10-07 03:14:14,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 23:14:34] 2025-10-07 03:14:33,047 | INFO     | PID=327302 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 23:14:34] 2025-10-07 03:14:33,048 | INFO     | .. there are 77 such processes running
[2025-10-06 23:14:34] 2025-10-07 03:14:33,048 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 23:14:34] 2025-10-07 03:14:33,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 23:14:34] 2025-10-07 03:14:33,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 23:14:34] 2025-10-07 03:14:33,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 23:14:34] 2025-10-07 03:14:33,048 | INFO     | [monitor] control thread has ended
[2025-10-06 23:14:34] 2025-10-07 03:14:33,392 [wrapper] ==== pilot stdout END ====
[2025-10-06 23:14:34] 2025-10-07 03:14:33,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 23:14:34] 2025-10-07 03:14:33,420 [wrapper] pilotpid: 327302
[2025-10-06 23:14:34] 2025-10-07 03:14:33,436 [wrapper] Pilot exit status: 0
[2025-10-06 23:14:34] 2025-10-07 03:14:33,564 [wrapper] pandaids: 6830226193
[2025-10-06 23:14:34] 2025-10-07 03:14:33,938 [wrapper] cleanup supervisor_pilot  841516 327303
[2025-10-06 23:14:34] 2025-10-07 03:14:33,949 [wrapper] Test setup, not cleaning
[2025-10-06 23:14:34] 2025-10-07 03:14:33,960 [wrapper] apfmon messages muted
[2025-10-06 23:14:34] 2025-10-07 03:14:33,973 [wrapper] ==== wrapper stdout END ====
[2025-10-06 23:14:34] 2025-10-07 03:14:33,993 [wrapper] ==== wrapper stderr END ====
[2025-10-06 23:14:34]  *** Error codes and diagnostics ***
[2025-10-06 23:14:34]     "exeErrorCode": 0,
[2025-10-06 23:14:34]     "exeErrorDiag": "",
[2025-10-06 23:14:34]     "pilotErrorCode": 0,
[2025-10-06 23:14:34]     "pilotErrorDiag": "",
[2025-10-06 23:14:34]  *** Listing of results directory ***
[2025-10-06 23:14:34] total 388756
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 15:56 pilot3.tar.gz
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 16:11 queuedata.json
[2025-10-06 23:14:34] -rwx------. 1 boincer umatlas     36292 Oct  4 16:11 runpilot2-wrapper.sh
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas       100 Oct  6 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 23:14:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 21:51 run_atlas
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas       105 Oct  6 21:51 job.xml
[2025-10-06 23:14:34] -rw-r--r--. 2 boincer umatlas 216062351 Oct  6 21:51 EVNT.46376901._002420.pool.root.1
[2025-10-06 23:14:34] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 21:51 start_atlas.sh
[2025-10-06 23:14:34] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 21:51 shared
[2025-10-06 23:14:34] -rw-r--r--. 2 boincer umatlas    565598 Oct  6 21:51 input.tar.gz
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas         0 Oct  6 21:51 boinc_lockfile
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas      2519 Oct  6 21:51 pandaJob.out
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas    975000 Oct  6 21:52 agis_schedconf.cvmfs.json
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas   1560401 Oct  6 21:52 agis_ddmendpoints.agis.ALL.json
[2025-10-06 23:14:34] drwx------. 4 boincer umatlas      4096 Oct  6 21:52 pilot3
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas      7162 Oct  6 23:10 init_data.xml
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas 176165941 Oct  6 23:12 HITS.46376905._066815.pool.root.1
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas       529 Oct  6 23:12 boinc_task_state.xml
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas      1034 Oct  6 23:13 memory_monitor_summary.json
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas    353165 Oct  6 23:13 log.46376905._066815.job.log.tgz.1
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas        95 Oct  6 23:13 pilot_heartbeat.json
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas      7776 Oct  6 23:13 heartbeat.json
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas      8192 Oct  6 23:14 boinc_mmap_file
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas        27 Oct  6 23:14 wrapper_checkpoint.txt
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas       822 Oct  6 23:14 pilotlog.txt
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas    633091 Oct  6 23:14 log.46376905._066815.job.log.1
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas       357 Oct  6 23:14 output.list
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas       620 Oct  6 23:14 runtime_log
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas   1003520 Oct  6 23:14 result.tar.gz
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas      8700 Oct  6 23:14 runtime_log.err
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas       651 Oct  6 23:14 alMNDmAmNP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRWMNDm3LVnTn.diag
[2025-10-06 23:14:34] -rw-r--r--. 1 boincer umatlas     22316 Oct  6 23:14 stderr.txt
[2025-10-06 23:14:34] HITS file was successfully produced:
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas 176165941 Oct  6 23:12 shared/HITS.pool.root.1
[2025-10-06 23:14:34]  *** Contents of shared directory: ***
[2025-10-06 23:14:34] total 384600
[2025-10-06 23:14:34] -rw-r--r--. 2 boincer umatlas 216062351 Oct  6 21:51 ATLAS.root_0
[2025-10-06 23:14:34] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 21:51 start_atlas.sh
[2025-10-06 23:14:34] -rw-r--r--. 2 boincer umatlas    565598 Oct  6 21:51 input.tar.gz
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas 176165941 Oct  6 23:12 HITS.pool.root.1
[2025-10-06 23:14:34] -rw-------. 1 boincer umatlas   1003520 Oct  6 23:14 result.tar.gz
23:14:36 (318293): run_atlas exited; CPU time 20462.357958
23:14:36 (318293): called boinc_finish(0)

</stderr_txt>
]]>

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