Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
04:34:24 (7340): wrapper (7.7.26015): starting
04:34:24 (7340): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 04:34:24] Arguments: --nthreads 8
[2025-10-07 04:34:24] Threads: 8
[2025-10-07 04:34:24] Checking for CVMFS
[2025-10-07 04:34:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 04:34:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 04:34:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 04:34:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 04:34:25] 2.11.0.0 5056 69935 68252 151420 2 188 2862982 4096001 2751 130560 0 10463501 99.797 3944006 366 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-07 04:34:25] CVMFS is ok
[2025-10-07 04:34:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 04:34:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 04:34:25] Further information can be found at the LHC@home message board.
[2025-10-07 04:34:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 04:34:25] Checking for apptainer binary...
[2025-10-07 04:34:25] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-07 04:34:25] apptainer is not installed, using version from CVMFS
[2025-10-07 04:34:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 04:34:25] WARNING: Environment variable TMPDIR already has value [/tmp/job_10286954/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node044
[2025-10-07 04:34:25] apptainer works
[2025-10-07 04:34:25] Set ATHENA_PROC_NUMBER=8
[2025-10-07 04:34:25] Set ATHENA_CORE_NUMBER=8
[2025-10-07 04:34:25] Starting ATLAS job with PandaID=6831978224
[2025-10-07 04:34:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10286954/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 05:18:41]  *** The last 200 lines of the pilot log: ***
[2025-10-07 05:18:41]  replicas=None
[2025-10-07 05:18:41]  scope=mc23_13p6TeV
[2025-10-07 05:18:41]  status=None
[2025-10-07 05:18:41]  status_code=0
[2025-10-07 05:18:41]  storage_token=
[2025-10-07 05:18:41]  surl=/tmp/job_10286954/atlas/pilot/slots/0/PanDA_Pilot-6831978224/log.46376905._096825.job.log.tgz.1
[2025-10-07 05:18:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/62/log.46376905._096825.job.log.tgz.1
[2025-10-07 05:18:41]  workdir=None
[2025-10-07 05:18:41] ]
[2025-10-07 05:18:41] 2025-10-07 03:17:34,140 | INFO     | transferring file log.46376905._096825.job.log.tgz.1 from /tmp/job_10286954/atlas/pilot/slots/0/PanDA_Pilot-6831978224/log.46376905._096825.job.log.tgz.1 to /tmp/j
[2025-10-07 05:18:41] 2025-10-07 03:17:34,140 | INFO     | executing command: /usr/bin/env mv /tmp/job_10286954/atlas/pilot/slots/0/PanDA_Pilot-6831978224/log.46376905._096825.job.log.tgz.1 /tmp/job_10286954/atlas/pilot/sl
[2025-10-07 05:18:41] 2025-10-07 03:17:34,148 | INFO     | adding to output.list: log.46376905._096825.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/62/log.46376905._096825.job.log.tg
[2025-10-07 05:18:41] 2025-10-07 03:17:34,149 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 05:18:41] 2025-10-07 03:17:34,149 | INFO     | summary of transferred files:
[2025-10-07 05:18:41] 2025-10-07 03:17:34,149 | INFO     |  -- lfn=log.46376905._096825.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 05:18:41] 2025-10-07 03:17:34,149 | INFO     | stage-out finished correctly
[2025-10-07 05:18:41] 2025-10-07 03:17:34,639 | INFO     | monitor loop #190: job 0:6831978224 is in state 'finished'
[2025-10-07 05:18:41] 2025-10-07 03:17:34,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 05:18:41] 2025-10-07 03:17:35,480 | INFO     | time since job start (2584s) is within the limit (172800.0s)
[2025-10-07 05:18:41] 2025-10-07 03:17:36,669 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 05:18:41] 2025-10-07 03:17:36,719 | INFO     | job 6831978224 has state=finished
[2025-10-07 05:18:41] 2025-10-07 03:17:36,719 | INFO     | preparing for final server update for job 6831978224 in state='finished'
[2025-10-07 05:18:41] 2025-10-07 03:17:36,719 | INFO     | this job has now completed (state=finished)
[2025-10-07 05:18:41] 2025-10-07 03:17:36,719 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 05:18:41] 2025-10-07 03:17:36,719 | INFO     | log transfer has been attempted: DONE
[2025-10-07 05:18:41] 2025-10-07 03:17:36,719 | INFO     | job 6831978224 has finished - writing final server update
[2025-10-07 05:18:41] 2025-10-07 03:17:36,719 | INFO     | total number of processed events: 400 (read)
[2025-10-07 05:18:41] 2025-10-07 03:17:36,720 | INFO     | executing command: lscpu
[2025-10-07 05:18:41] 2025-10-07 03:17:36,760 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 05:18:41] 2025-10-07 03:17:37,141 | INFO     | monitor loop #191: job 0:6831978224 is in state 'finished'
[2025-10-07 05:18:41] 2025-10-07 03:17:37,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 05:18:41] 2025-10-07 03:17:37,486 | INFO     | time since job start (2586s) is within the limit (172800.0s)
[2025-10-07 05:18:41] 2025-10-07 03:17:39,491 | INFO     | time since job start (2588s) is within the limit (172800.0s)
[2025-10-07 05:18:41] 2025-10-07 03:17:39,644 | INFO     | monitor loop #192: job 0:6831978224 is in state 'finished'
[2025-10-07 05:18:41] 2025-10-07 03:17:39,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 05:18:41] 2025-10-07 03:17:39,769 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 05:18:41] 2025-10-07 03:17:39,777 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2465.1054609375005
[2025-10-07 05:18:41] 2025-10-07 03:17:39,788 | INFO     | using path: /tmp/job_10286954/atlas/pilot/slots/0/PanDA_Pilot-6831978224/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 05:18:41] 2025-10-07 03:17:39,788 | INFO     | extracted standard info from prmon json
[2025-10-07 05:18:41] 2025-10-07 03:17:39,788 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 05:18:41] 2025-10-07 03:17:39,788 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 05:18:41] 2025-10-07 03:17:39,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 05:18:41] 2025-10-07 03:17:39,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 05:18:41] 2025-10-07 03:17:39,789 | INFO     | fitting pss+swap vs Time
[2025-10-07 05:18:41] 2025-10-07 03:17:39,789 | INFO     | sum of square deviations: 13283970.0
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | sum of deviations: -776454116.0
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | mean x: 1759805832.0
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | mean y: 2643781.4857142856
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | -- intersect: 102864098724.33824
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | intersect: 102864098724.33824
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | chi2: 0.007483721660439822
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | -- intersect: 102864098724.33824
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | current memory leak: -58.45 B/s (using 35 data points, chi2=0.01)
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | could have reported an average CPU frequency of 2505 MHz (5 samples)
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | ..............................
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | . Timing measurements:
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | . get job = 0 s
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | . initial setup = 1 s
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | . payload setup = 2 s
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | . stage-in = 0 s
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | . payload execution = 2563 s
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | . stage-out = 0 s
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | . log creation = 0 s
[2025-10-07 05:18:41] 2025-10-07 03:17:39,790 | INFO     | ..............................
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | 
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | job summary report
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | --------------------------------------------------
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | PanDA job id: 6831978224
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | task id: 46376905
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | errors: (none)
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | pilot state: finished 
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | transexitcode: 0
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | exeerrorcode: 0
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | exeerrordiag: 
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | exitcode: 0
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | exitmsg: OK
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | cpuconsumptiontime: 18579 s
[2025-10-07 05:18:41] 2025-10-07 03:17:39,843 | INFO     | nevents: 400
[2025-10-07 05:18:41] 2025-10-07 03:17:39,844 | INFO     | neventsw: 0
[2025-10-07 05:18:41] 2025-10-07 03:17:39,844 | INFO     | pid: 20811
[2025-10-07 05:18:41] 2025-10-07 03:17:39,844 | INFO     | pgrp: 20811
[2025-10-07 05:18:41] 2025-10-07 03:17:39,844 | INFO     | corecount: 8
[2025-10-07 05:18:41] 2025-10-07 03:17:39,844 | INFO     | event service: False
[2025-10-07 05:18:41] 2025-10-07 03:17:39,844 | INFO     | sizes: {0: 2348604, 1: 2348970, 3: 2349232, 11: 2349260, 2569: 2383572, 2572: 2383572, 2575: 2383926}
[2025-10-07 05:18:41] 2025-10-07 03:17:39,844 | INFO     | --------------------------------------------------
[2025-10-07 05:18:41] 2025-10-07 03:17:39,844 | INFO     | 
[2025-10-07 05:18:41] 2025-10-07 03:17:39,844 | INFO     | executing command: ls -lF /tmp/job_10286954/atlas/pilot/slots/0
[2025-10-07 05:18:41] 2025-10-07 03:17:39,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | job 6831978224 has completed (purged errors)
[2025-10-07 05:18:41] 2025-10-07 03:17:39,854 | INFO     | overall cleanup function is called
[2025-10-07 05:18:41] 2025-10-07 03:17:40,860 | INFO     | --- collectZombieJob: --- 10, [20811]
[2025-10-07 05:18:41] 2025-10-07 03:17:40,860 | INFO     | zombie collector waiting for pid 20811
[2025-10-07 05:18:41] 2025-10-07 03:17:40,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 05:18:41] 2025-10-07 03:17:40,860 | INFO     | collected zombie processes
[2025-10-07 05:18:41] 2025-10-07 03:17:40,860 | INFO     | will attempt to kill all subprocesses of pid=20811
[2025-10-07 05:18:41] 2025-10-07 03:17:41,016 | INFO     | process IDs to be killed: [20811] (in reverse order)
[2025-10-07 05:18:41] 2025-10-07 03:17:41,059 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 05:18:41] 2025-10-07 03:17:41,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 05:18:41] 2025-10-07 03:17:41,065 | INFO     | did not find any defunct processes belonging to 20811
[2025-10-07 05:18:41] 2025-10-07 03:17:41,070 | INFO     | did not find any defunct processes belonging to 20811
[2025-10-07 05:18:41] 2025-10-07 03:17:41,070 | INFO     | ready for new job
[2025-10-07 05:18:41] 2025-10-07 03:17:41,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 05:18:41] 2025-10-07 03:17:41,071 | INFO     | ***************************************
[2025-10-07 05:18:41] 2025-10-07 03:17:41,071 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 05:18:41] 2025-10-07 03:17:41,071 | INFO     | ***************************************
[2025-10-07 05:18:41] 2025-10-07 03:17:41,071 | INFO     | 
[2025-10-07 05:18:41] 2025-10-07 03:17:41,087 | INFO     | architecture information:
[2025-10-07 05:18:41] 2025-10-07 03:17:41,087 | INFO     | executing command: cat /etc/os-release
[2025-10-07 05:18:41] 2025-10-07 03:17:41,093 | INFO     | cat /etc/os-release:
[2025-10-07 05:18:41] NAME="CentOS Linux"
[2025-10-07 05:18:41] VERSION="7 (Core)"
[2025-10-07 05:18:41] ID="centos"
[2025-10-07 05:18:41] ID_LIKE="rhel fedora"
[2025-10-07 05:18:41] VERSION_ID="7"
[2025-10-07 05:18:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 05:18:41] ANSI_COLOR="0;31"
[2025-10-07 05:18:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 05:18:41] HOME_URL="https://www.centos.org/"
[2025-10-07 05:18:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 05:18:41] 
[2025-10-07 05:18:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 05:18:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 05:18:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 05:18:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 05:18:41] 
[2025-10-07 05:18:41] 2025-10-07 03:17:41,093 | INFO     | ***************************************
[2025-10-07 05:18:41] 2025-10-07 03:17:41,596 | INFO     | executing command: df -mP /tmp/job_10286954/atlas/pilot/slots/0
[2025-10-07 05:18:41] 2025-10-07 03:17:41,603 | INFO     | sufficient remaining disk space (227027189760 B)
[2025-10-07 05:18:41] 2025-10-07 03:17:41,603 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 05:18:41] 2025-10-07 03:17:41,603 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 05:18:41] 2025-10-07 03:17:41,603 | INFO     | update_server=False
[2025-10-07 05:18:41] 2025-10-07 03:17:41,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 05:18:41] 2025-10-07 03:17:41,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 05:18:41] 2025-10-07 03:17:41,603 | INFO     | aborting loop
[2025-10-07 05:18:41] 2025-10-07 03:17:41,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 05:18:41] 2025-10-07 03:17:41,771 | INFO     | all data control threads have been joined
[2025-10-07 05:18:41] 2025-10-07 03:17:42,029 | INFO     | all payload control threads have been joined
[2025-10-07 05:18:41] 2025-10-07 03:17:42,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 05:18:41] 2025-10-07 03:17:42,604 | INFO     | [job] job monitor thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:42,608 | INFO     | [job] retrieve thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:42,608 | INFO     | [job] queue monitor thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:42,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 05:18:41] 2025-10-07 03:17:42,776 | INFO     | [data] control thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:42,780 | INFO     | [data] copytool_in thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:42,783 | INFO     | [payload] validate_post thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:42,939 | INFO     | all job control threads have been joined
[2025-10-07 05:18:41] 2025-10-07 03:17:43,035 | INFO     | [payload] control thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:43,115 | INFO     | [job] validate thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:43,355 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:43,460 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:43,584 | INFO     | [payload] failed_post thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:43,734 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:43,944 | INFO     | [job] control thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:44,223 | INFO     | [data] copytool_out thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:46,729 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:17:52,276 | INFO     | job.realtimelogging is not enabled
[2025-10-07 05:18:41] 2025-10-07 03:17:53,281 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 05:18:41] 2025-10-07 03:18:12,758 | INFO     | PID=12423 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 05:18:41] 2025-10-07 03:18:12,758 | INFO     | .. there are 3 such processes running
[2025-10-07 05:18:41] 2025-10-07 03:18:12,758 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 05:18:41] 2025-10-07 03:18:12,758 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 05:18:41] 2025-10-07 03:18:12,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 05:18:41] 2025-10-07 03:18:34,817 | INFO     | [monitor] cgroup control has ended
[2025-10-07 05:18:41] 2025-10-07 03:18:36,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456060544768)>']
[2025-10-07 05:18:41] 2025-10-07 03:18:36,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 05:18:41] 2025-10-07 03:18:36,876 | INFO     | [monitor] control thread has ended
[2025-10-07 05:18:41] 2025-10-07 03:18:41,626 | INFO     | all workflow threads have been joined
[2025-10-07 05:18:41] 2025-10-07 03:18:41,626 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 05:18:41] 2025-10-07 03:18:41,627 | INFO     | traces error code: 0
[2025-10-07 05:18:41] 2025-10-07 03:18:41,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 05:18:41] 2025-10-07 03:18:41,688 [wrapper] ==== pilot stdout END ====
[2025-10-07 05:18:41] 2025-10-07 03:18:41,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 05:18:41] 2025-10-07 03:18:41,690 [wrapper] pilotpid: 12423
[2025-10-07 05:18:41] 2025-10-07 03:18:41,692 [wrapper] Pilot exit status: 0
[2025-10-07 05:18:41] 2025-10-07 03:18:41,696 [wrapper] pandaids: 6831978224
[2025-10-07 05:18:41] 2025-10-07 03:18:41,731 [wrapper] cleanup supervisor_pilot 26830 12424
[2025-10-07 05:18:41] 2025-10-07 03:18:41,733 [wrapper] Test setup, not cleaning
[2025-10-07 05:18:41] 2025-10-07 03:18:41,734 [wrapper] apfmon messages muted
[2025-10-07 05:18:41] 2025-10-07 03:18:41,735 [wrapper] ==== wrapper stdout END ====
[2025-10-07 05:18:41] 2025-10-07 03:18:41,737 [wrapper] ==== wrapper stderr END ====
[2025-10-07 05:18:41]  *** Error codes and diagnostics ***
[2025-10-07 05:18:41]     "exeErrorCode": 0,
[2025-10-07 05:18:41]     "exeErrorDiag": "",
[2025-10-07 05:18:41]     "pilotErrorCode": 0,
[2025-10-07 05:18:41]     "pilotErrorDiag": "",
[2025-10-07 05:18:41]  *** Listing of results directory ***
[2025-10-07 05:18:41] total 388852
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user    552446 Oct  5 22:57 pilot3.tar.gz
[2025-10-07 05:18:41] -rwx------ 1 mf493845 unix-user     36292 Oct  5 23:35 runpilot2-wrapper.sh
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user      5112 Oct  5 23:35 queuedata.json
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user       100 Oct  7 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 05:18:41] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct  7 03:40 run_atlas
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user       105 Oct  7 03:40 job.xml
[2025-10-07 05:18:41] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  7 04:34 start_atlas.sh
[2025-10-07 05:18:41] drwxrwx--x 2 mf493845 unix-user       100 Oct  7 04:34 shared
[2025-10-07 05:18:41] -rw-r--r-- 2 mf493845 unix-user    565598 Oct  7 04:34 input.tar.gz
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user      6387 Oct  7 04:34 init_data.xml
[2025-10-07 05:18:41] -rw-r--r-- 2 mf493845 unix-user 213330239 Oct  7 04:34 EVNT.46376901._003574.pool.root.1
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user         0 Oct  7 04:34 boinc_setup_complete
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user      8192 Oct  7 04:34 boinc_mmap_file
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user         0 Oct  7 04:34 boinc_lockfile
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user      2519 Oct  7 04:34 pandaJob.out
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user    974984 Oct  7 04:34 agis_schedconf.cvmfs.json
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user   1560401 Oct  7 04:34 agis_ddmendpoints.agis.ALL.json
[2025-10-07 05:18:41] drwx------ 4 mf493845 unix-user       400 Oct  7 04:34 pilot3
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user 179598552 Oct  7 05:17 HITS.46376905._096825.pool.root.1
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user        95 Oct  7 05:17 pilot_heartbeat.json
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user      1016 Oct  7 05:17 memory_monitor_summary.json
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user    285205 Oct  7 05:17 log.46376905._096825.job.log.tgz.1
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user      7773 Oct  7 05:17 heartbeat.json
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user      4907 Oct  7 05:18 pilotlog.txt
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user    412078 Oct  7 05:18 log.46376905._096825.job.log.1
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user       357 Oct  7 05:18 output.list
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user       620 Oct  7 05:18 runtime_log
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user    716800 Oct  7 05:18 result.tar.gz
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user      9076 Oct  7 05:18 runtime_log.err
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user       642 Oct  7 05:18 Kr2LDmpYlP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBHRNDmz1YyYm.diag
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user     22293 Oct  7 05:18 stderr.txt
[2025-10-07 05:18:41] HITS file was successfully produced:
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user 179598552 Oct  7 05:17 shared/HITS.pool.root.1
[2025-10-07 05:18:41]  *** Contents of shared directory: ***
[2025-10-07 05:18:41] total 384996
[2025-10-07 05:18:41] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  7 04:34 start_atlas.sh
[2025-10-07 05:18:41] -rw-r--r-- 2 mf493845 unix-user    565598 Oct  7 04:34 input.tar.gz
[2025-10-07 05:18:41] -rw-r--r-- 2 mf493845 unix-user 213330239 Oct  7 04:34 ATLAS.root_0
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user 179598552 Oct  7 05:17 HITS.pool.root.1
[2025-10-07 05:18:41] -rw------- 1 mf493845 unix-user    716800 Oct  7 05:18 result.tar.gz
05:18:43 (7340): run_atlas exited; CPU time 18629.126180
05:18:43 (7340): called boinc_finish(0)

</stderr_txt>
]]>

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