Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:13:15 (617515): wrapper (7.7.26015): starting
08:13:15 (617515): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 08:13:15] Arguments: --nthreads 4
[2025-10-11 08:13:15] Threads: 4
[2025-10-11 08:13:15] Checking for CVMFS
[2025-10-11 08:13:15] No cvmfs_config command found, will try listing directly
[2025-10-11 08:13:15] CVMFS is ok
[2025-10-11 08:13:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 08:13:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 08:13:15] Further information can be found at the LHC@home message board.
[2025-10-11 08:13:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 08:13:15] Checking for apptainer binary...
[2025-10-11 08:13:15] which: no apptainer in ((null))
[2025-10-11 08:13:15] apptainer is not installed, using version from CVMFS
[2025-10-11 08:13:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 08:13:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2025-10-11 08:13:15] apptainer works
[2025-10-11 08:13:15] Set ATHENA_PROC_NUMBER=4
[2025-10-11 08:13:15] Set ATHENA_CORE_NUMBER=4
[2025-10-11 08:13:15] Starting ATLAS job with PandaID=6832859115
[2025-10-11 08:13:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:46:06]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:46:06] 2025-10-11 09:39:04,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 11:46:06] 2025-10-11 09:39:04,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:46:06] 2025-10-11 09:39:04,049 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:46:06] 2025-10-11 09:39:04,051 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:46:06] 2025-10-11 09:39:04,052 | INFO     | sum of square deviations: 2555765770.4950557
[2025-10-11 11:46:06] 2025-10-11 09:39:04,052 | INFO     | sum of deviations: 23082448284.811886
[2025-10-11 11:46:06] 2025-10-11 09:39:04,052 | INFO     | mean x: 1760169361.5049505
[2025-10-11 11:46:06] 2025-10-11 09:39:04,053 | INFO     | mean y: 2314483.1881188117
[2025-10-11 11:46:06] 2025-10-11 09:39:04,053 | INFO     | -- intersect: -15894689353.583073
[2025-10-11 11:46:06] 2025-10-11 09:39:04,053 | INFO     | intersect: -15894689353.583073
[2025-10-11 11:46:06] 2025-10-11 09:39:04,053 | INFO     | chi2: 1.3269133829083226
[2025-10-11 11:46:06] 2025-10-11 09:39:04,053 | INFO     | sum of square deviations: 2370637022.9949207
[2025-10-11 11:46:06] 2025-10-11 09:39:04,054 | INFO     | sum of deviations: 22425853975.725883
[2025-10-11 11:46:06] 2025-10-11 09:39:04,054 | INFO     | mean x: 1760169209.0050762
[2025-10-11 11:46:06] 2025-10-11 09:39:04,054 | INFO     | mean y: 2313942.274111675
[2025-10-11 11:46:06] 2025-10-11 09:39:04,054 | INFO     | -- intersect: -16648610375.042324
[2025-10-11 11:46:06] 2025-10-11 09:39:04,055 | INFO     | intersect: -16648610375.042324
[2025-10-11 11:46:06] 2025-10-11 09:39:04,055 | INFO     | chi2: 1.3276708308103875
[2025-10-11 11:46:06] 2025-10-11 09:39:04,055 | INFO     | current chi2=1.3276708308103875 (change=-0.05708344733133361 %)
[2025-10-11 11:46:06] 2025-10-11 09:39:04,055 | INFO     | right removable region: 196
[2025-10-11 11:46:06] 2025-10-11 09:39:04,055 | INFO     | sum of square deviations: 2370636412.9949207
[2025-10-11 11:46:06] 2025-10-11 09:39:04,056 | INFO     | sum of deviations: -3528695773.2741117
[2025-10-11 11:46:06] 2025-10-11 09:39:04,056 | INFO     | mean x: 1760169514.0050762
[2025-10-11 11:46:06] 2025-10-11 09:39:04,056 | INFO     | mean y: 2336153.274111675
[2025-10-11 11:46:06] 2025-10-11 09:39:04,056 | INFO     | -- intersect: 2622351053.1840153
[2025-10-11 11:46:06] 2025-10-11 09:39:04,056 | INFO     | intersect: 2622351053.1840153
[2025-10-11 11:46:06] 2025-10-11 09:39:04,057 | INFO     | chi2: 0.017894419785354904
[2025-10-11 11:46:06] 2025-10-11 09:39:04,057 | INFO     | current chi2=0.017894419785354904 (change=98.65142517847441 %)
[2025-10-11 11:46:06] 2025-10-11 09:39:04,057 | INFO     | sum of square deviations: 2194670017.9948006
[2025-10-11 11:46:06] 2025-10-11 09:39:04,058 | INFO     | sum of deviations: -5105389615.677079
[2025-10-11 11:46:06] 2025-10-11 09:39:04,058 | INFO     | mean x: 1760169666.5052083
[2025-10-11 11:46:06] 2025-10-11 09:39:04,058 | INFO     | mean y: 2337497.6770833335
[2025-10-11 11:46:06] 2025-10-11 09:39:04,058 | INFO     | -- intersect: 4096963051.1878653
[2025-10-11 11:46:06] 2025-10-11 09:39:04,058 | INFO     | intersect: 4096963051.1878653
[2025-10-11 11:46:06] 2025-10-11 09:39:04,059 | INFO     | chi2: 0.010111682349945169
[2025-10-11 11:46:06] 2025-10-11 09:39:04,059 | INFO     | current chi2=0.010111682349945169 (change=43.4925386168668 %)
[2025-10-11 11:46:06] 2025-10-11 09:39:04,059 | INFO     | sum of square deviations: 2027634022.994655
[2025-10-11 11:46:06] 2025-10-11 09:39:04,060 | INFO     | sum of deviations: -4575135403.925131
[2025-10-11 11:46:06] 2025-10-11 09:39:04,060 | INFO     | mean x: 1760169819.0053475
[2025-10-11 11:46:06] 2025-10-11 09:39:04,060 | INFO     | mean y: 2337009.92513369
[2025-10-11 11:46:06] 2025-10-11 09:39:04,060 | INFO     | -- intersect: 3973968559.073332
[2025-10-11 11:46:06] 2025-10-11 09:39:04,060 | INFO     | intersect: 3973968559.073332
[2025-10-11 11:46:06] 2025-10-11 09:39:04,060 | INFO     | chi2: 0.010008008611062637
[2025-10-11 11:46:06] 2025-10-11 09:39:04,060 | INFO     | current chi2=0.010008008611062637 (change=1.0252867455146475 %)
[2025-10-11 11:46:06] 2025-10-11 09:39:04,061 | INFO     | left removable region: 30
[2025-10-11 11:46:06] 2025-10-11 09:39:04,061 | INFO     | sum of square deviations: 1418355073.4939694
[2025-10-11 11:46:06] 2025-10-11 09:39:04,062 | INFO     | sum of deviations: -1318288088.6987948
[2025-10-11 11:46:06] 2025-10-11 09:39:04,062 | INFO     | mean x: 1760170093.5060241
[2025-10-11 11:46:06] 2025-10-11 09:39:04,062 | INFO     | mean y: 2333527.198795181
[2025-10-11 11:46:06] 2025-10-11 09:39:04,062 | INFO     | -- intersect: 1638321095.979259
[2025-10-11 11:46:06] 2025-10-11 09:39:04,062 | INFO     | intersect: 1638321095.979259
[2025-10-11 11:46:06] 2025-10-11 09:39:04,062 | INFO     | chi2: 0.007127020931953854
[2025-10-11 11:46:06] 2025-10-11 09:39:04,062 | INFO     | -- intersect: 1638321095.979259
[2025-10-11 11:46:06] 2025-10-11 09:39:04,062 | INFO     | current memory leak: -0.93 B/s (using 166 data points, chi2=0.01)
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | could have reported an average CPU frequency of 2502 MHz (10 samples)
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | ..............................
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | . Timing measurements:
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | . get job = 0 s
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | . initial setup = 1 s
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | . payload setup = 5 s
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | . stage-in = 0 s
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | . payload execution = 12307 s
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | . stage-out = 1 s
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | . log creation = 0 s
[2025-10-11 11:46:06] 2025-10-11 09:39:04,063 | INFO     | ..............................
[2025-10-11 11:46:06] 2025-10-11 09:39:04,322 | INFO     | 
[2025-10-11 11:46:06] 2025-10-11 09:39:04,322 | INFO     | job summary report
[2025-10-11 11:46:06] 2025-10-11 09:39:04,322 | INFO     | --------------------------------------------------
[2025-10-11 11:46:06] 2025-10-11 09:39:04,322 | INFO     | PanDA job id: 6832859115
[2025-10-11 11:46:06] 2025-10-11 09:39:04,322 | INFO     | task id: 46376905
[2025-10-11 11:46:06] 2025-10-11 09:39:04,323 | INFO     | errors: (none)
[2025-10-11 11:46:06] 2025-10-11 09:39:04,323 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:46:06] 2025-10-11 09:39:04,323 | INFO     | pilot state: finished 
[2025-10-11 11:46:06] 2025-10-11 09:39:04,323 | INFO     | transexitcode: 0
[2025-10-11 11:46:06] 2025-10-11 09:39:04,323 | INFO     | exeerrorcode: 0
[2025-10-11 11:46:06] 2025-10-11 09:39:04,323 | INFO     | exeerrordiag: 
[2025-10-11 11:46:06] 2025-10-11 09:39:04,323 | INFO     | exitcode: 0
[2025-10-11 11:46:06] 2025-10-11 09:39:04,323 | INFO     | exitmsg: OK
[2025-10-11 11:46:06] 2025-10-11 09:39:04,323 | INFO     | cpuconsumptiontime: 46971 s
[2025-10-11 11:46:06] 2025-10-11 09:39:04,324 | INFO     | nevents: 400
[2025-10-11 11:46:06] 2025-10-11 09:39:04,324 | INFO     | neventsw: 0
[2025-10-11 11:46:06] 2025-10-11 09:39:04,324 | INFO     | pid: 653434
[2025-10-11 11:46:06] 2025-10-11 09:39:04,324 | INFO     | pgrp: 653434
[2025-10-11 11:46:06] 2025-10-11 09:39:04,324 | INFO     | corecount: 4
[2025-10-11 11:46:06] 2025-10-11 09:39:04,324 | INFO     | event service: False
[2025-10-11 11:46:06] 2025-10-11 09:39:04,324 | INFO     | sizes: {0: 2347992, 1: 2348859, 5: 2349121, 12: 2349177, 12315: 2379066, 12316: 2379065, 12317: 2388269, 12318: 2388325, 12323: 2388519}
[2025-10-11 11:46:06] 2025-10-11 09:39:04,324 | INFO     | --------------------------------------------------
[2025-10-11 11:46:06] 2025-10-11 09:39:04,325 | INFO     | 
[2025-10-11 11:46:06] 2025-10-11 09:39:04,325 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-10-11 11:46:06] 2025-10-11 09:39:04,347 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,347 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,347 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,347 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,349 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:46:06] 2025-10-11 09:39:04,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,350 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:46:06] 2025-10-11 09:39:04,350 | INFO     | job 6832859115 has completed (purged errors)
[2025-10-11 11:46:06] 2025-10-11 09:39:04,350 | INFO     | overall cleanup function is called
[2025-10-11 11:46:06] 2025-10-11 09:39:05,358 | INFO     | --- collectZombieJob: --- 10, [653434]
[2025-10-11 11:46:06] 2025-10-11 09:39:05,358 | INFO     | zombie collector waiting for pid 653434
[2025-10-11 11:46:06] 2025-10-11 09:39:05,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:46:06] 2025-10-11 09:39:05,358 | INFO     | collected zombie processes
[2025-10-11 11:46:06] 2025-10-11 09:39:05,359 | INFO     | will attempt to kill all subprocesses of pid=653434
[2025-10-11 11:46:06] 2025-10-11 09:39:05,712 | INFO     | process IDs to be killed: [653434] (in reverse order)
[2025-10-11 11:46:06] 2025-10-11 09:39:05,807 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:46:06] 2025-10-11 09:39:05,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:46:06] 2025-10-11 09:39:05,818 | INFO     | did not find any defunct processes belonging to 653434
[2025-10-11 11:46:06] 2025-10-11 09:39:05,827 | INFO     | did not find any defunct processes belonging to 653434
[2025-10-11 11:46:06] 2025-10-11 09:39:05,827 | INFO     | ready for new job
[2025-10-11 11:46:06] 2025-10-11 09:39:05,828 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:46:06] 2025-10-11 09:39:05,830 | INFO     | ***************************************
[2025-10-11 11:46:06] 2025-10-11 09:39:05,830 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 11:46:06] 2025-10-11 09:39:05,830 | INFO     | ***************************************
[2025-10-11 11:46:06] 2025-10-11 09:39:05,830 | INFO     | 
[2025-10-11 11:46:06] 2025-10-11 09:39:05,833 | INFO     | architecture information:
[2025-10-11 11:46:06] 2025-10-11 09:39:05,833 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:46:06] 2025-10-11 09:39:05,847 | INFO     | cat /etc/os-release:
[2025-10-11 11:46:06] NAME="CentOS Linux"
[2025-10-11 11:46:06] VERSION="7 (Core)"
[2025-10-11 11:46:06] ID="centos"
[2025-10-11 11:46:06] ID_LIKE="rhel fedora"
[2025-10-11 11:46:06] VERSION_ID="7"
[2025-10-11 11:46:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:46:06] ANSI_COLOR="0;31"
[2025-10-11 11:46:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:46:06] HOME_URL="https://www.centos.org/"
[2025-10-11 11:46:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:46:06] 
[2025-10-11 11:46:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:46:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:46:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:46:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:46:06] 
[2025-10-11 11:46:06] 2025-10-11 09:39:05,847 | INFO     | ***************************************
[2025-10-11 11:46:06] 2025-10-11 09:39:06,350 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-10-11 11:46:06] 2025-10-11 09:39:06,367 | INFO     | sufficient remaining disk space (1678354939904 B)
[2025-10-11 11:46:06] 2025-10-11 09:39:06,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:46:06] 2025-10-11 09:39:06,368 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:46:06] 2025-10-11 09:39:06,368 | INFO     | update_server=False
[2025-10-11 11:46:06] 2025-10-11 09:39:06,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:46:06] 2025-10-11 09:39:06,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:46:06] 2025-10-11 09:39:06,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:46:06] 2025-10-11 09:39:06,369 | INFO     | aborting loop
[2025-10-11 11:46:06] 2025-10-11 09:39:06,591 | INFO     | all job control threads have been joined
[2025-10-11 11:46:06] 2025-10-11 09:39:06,843 | INFO     | all data control threads have been joined
[2025-10-11 11:46:06] 2025-10-11 09:39:07,374 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:07,375 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:07,387 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:07,486 | INFO     | all payload control threads have been joined
[2025-10-11 11:46:06] 2025-10-11 09:39:07,568 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:07,593 | INFO     | [job] control thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:07,848 | INFO     | [data] control thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:08,037 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:08,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:08,373 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:08,383 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:08,490 | INFO     | [payload] control thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:08,689 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:08,869 | INFO     | [job] validate thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:08,889 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:09,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:46:06] 2025-10-11 09:39:09,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:46:06] 2025-10-11 09:39:10,138 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:13,796 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:46:06] 2025-10-11 09:39:37,095 | INFO     | PID=625890 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 11:46:06] 2025-10-11 09:39:37,096 | INFO     | .. there are 4 such processes running
[2025-10-11 11:46:06] 2025-10-11 09:39:37,096 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:46:06] 2025-10-11 09:39:37,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:46:06] 2025-10-11 09:39:37,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:46:06] 2025-10-11 09:39:45,194 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:46:06] 2025-10-11 09:39:46,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23349279528768)>', '<ExcThread(monitor, started 23348971013888)>']
[2025-10-11 11:46:06] 2025-10-11 09:39:47,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:46:06] 2025-10-11 09:39:47,146 | INFO     | [monitor] control thread has ended
[2025-10-11 11:46:06] 2025-10-11 09:39:51,729 | INFO     | all workflow threads have been joined
[2025-10-11 11:46:06] 2025-10-11 09:39:51,729 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:46:06] 2025-10-11 09:39:51,730 | INFO     | traces error code: 0
[2025-10-11 11:46:06] 2025-10-11 09:39:51,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:46:06] 2025-10-11 09:39:51,864 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:46:06] 2025-10-11 09:39:51,866 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:46:06] 2025-10-11 09:39:51,868 [wrapper] pilotpid: 625890
[2025-10-11 11:46:06] 2025-10-11 09:39:51,870 [wrapper] Pilot exit status: 0
[2025-10-11 11:46:06] 2025-10-11 09:39:51,880 [wrapper] pandaids: 6832859115
[2025-10-11 11:46:06] 2025-10-11 09:39:51,938 [wrapper] cleanup supervisor_pilot  877502 625891
[2025-10-11 11:46:06] 2025-10-11 09:39:51,941 [wrapper] Test setup, not cleaning
[2025-10-11 11:46:06] 2025-10-11 09:39:51,944 [wrapper] apfmon messages muted
[2025-10-11 11:46:06] 2025-10-11 09:39:51,947 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:46:06] 2025-10-11 09:39:51,949 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:46:06]  *** Error codes and diagnostics ***
[2025-10-11 11:46:06]     "exeErrorCode": 0,
[2025-10-11 11:46:06]     "exeErrorDiag": "",
[2025-10-11 11:46:06]     "pilotErrorCode": 0,
[2025-10-11 11:46:06]     "pilotErrorDiag": "",
[2025-10-11 11:46:06]  *** Listing of results directory ***
[2025-10-11 11:46:06] total 384252
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc    552446 Oct  6 18:16 pilot3.tar.gz
[2025-10-11 11:46:06] -rwx------ 1 boinc boinc     36292 Oct  6 18:20 runpilot2-wrapper.sh
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc      5112 Oct  6 18:20 queuedata.json
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc       100 Oct 11 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:46:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 08:13 run_atlas
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc       105 Oct 11 08:13 job.xml
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc      6420 Oct 11 08:13 init_data.xml
[2025-10-11 11:46:06] -rw-r--r-- 2 boinc boinc 211304438 Oct 11 08:13 EVNT.46376901._004245.pool.root.1
[2025-10-11 11:46:06] drwxrwx--x 2 boinc boinc      4096 Oct 11 08:13 shared
[2025-10-11 11:46:06] -rw-r--r-- 2 boinc boinc    565602 Oct 11 08:13 input.tar.gz
[2025-10-11 11:46:06] -rw-r--r-- 2 boinc boinc     15120 Oct 11 08:13 start_atlas.sh
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc         0 Oct 11 08:13 boinc_lockfile
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc      2521 Oct 11 08:13 pandaJob.out
[2025-10-11 11:46:06] -rw------- 1 boinc boinc    975533 Oct 11 08:13 agis_schedconf.cvmfs.json
[2025-10-11 11:46:06] drwx------ 4 boinc boinc      4096 Oct 11 08:13 pilot3
[2025-10-11 11:46:06] -rw------- 1 boinc boinc 174024917 Oct 11 11:38 HITS.46376905._114562.pool.root.1
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc       529 Oct 11 11:38 boinc_task_state.xml
[2025-10-11 11:46:06] -rw------- 1 boinc boinc      1032 Oct 11 11:38 memory_monitor_summary.json
[2025-10-11 11:46:06] -rw------- 1 boinc boinc        95 Oct 11 11:38 pilot_heartbeat.json
[2025-10-11 11:46:06] -rw------- 1 boinc boinc   1560580 Oct 11 11:38 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:46:06] -rw------- 1 boinc boinc    386782 Oct 11 11:38 log.46376905._114562.job.log.tgz.1
[2025-10-11 11:46:06] -rw------- 1 boinc boinc      7835 Oct 11 11:39 heartbeat.json
[2025-10-11 11:46:06] -rw------- 1 boinc boinc      4833 Oct 11 11:39 pilotlog.txt
[2025-10-11 11:46:06] -rw------- 1 boinc boinc   1739689 Oct 11 11:39 log.46376905._114562.job.log.1
[2025-10-11 11:46:06] -rw------- 1 boinc boinc       357 Oct 11 11:39 output.list
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc       620 Oct 11 11:39 runtime_log
[2025-10-11 11:46:06] -rw------- 1 boinc boinc   2150400 Oct 11 11:39 result.tar.gz
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc      9070 Oct 11 11:39 runtime_log.err
[2025-10-11 11:46:06] -rw------- 1 boinc boinc       665 Oct 11 11:39 UcpNDm672P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpXJMDmRIx2wn.diag
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc        26 Oct 11 11:45 wrapper_checkpoint.txt
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc      8192 Oct 11 11:46 boinc_mmap_file
[2025-10-11 11:46:06] -rw-r--r-- 1 boinc boinc     20781 Oct 11 11:46 stderr.txt
[2025-10-11 11:46:06] HITS file was successfully produced:
[2025-10-11 11:46:06] -rw------- 1 boinc boinc 174024917 Oct 11 11:38 shared/HITS.pool.root.1
[2025-10-11 11:46:06]  *** Contents of shared directory: ***
[2025-10-11 11:46:06] total 378976
[2025-10-11 11:46:06] -rw-r--r-- 2 boinc boinc 211304438 Oct 11 08:13 ATLAS.root_0
[2025-10-11 11:46:06] -rw-r--r-- 2 boinc boinc    565602 Oct 11 08:13 input.tar.gz
[2025-10-11 11:46:06] -rw-r--r-- 2 boinc boinc     15120 Oct 11 08:13 start_atlas.sh
[2025-10-11 11:46:06] -rw------- 1 boinc boinc 174024917 Oct 11 11:38 HITS.pool.root.1
[2025-10-11 11:46:06] -rw------- 1 boinc boinc   2150400 Oct 11 11:39 result.tar.gz
11:46:08 (617515): run_atlas exited; CPU time 47433.063914
11:46:08 (617515): called boinc_finish(0)

</stderr_txt>
]]>

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