Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:55:25 (2850150): wrapper (7.7.26015): starting
11:55:25 (2850150): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 11:55:25] Arguments: --nthreads 4
[2025-10-10 11:55:25] Threads: 4
[2025-10-10 11:55:25] Checking for CVMFS
[2025-10-10 11:55:25] No cvmfs_config command found, will try listing directly
[2025-10-10 11:55:25] CVMFS is ok
[2025-10-10 11:55:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 11:55:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 11:55:25] Further information can be found at the LHC@home message board.
[2025-10-10 11:55:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 11:55:25] Checking for apptainer binary...
[2025-10-10 11:55:25] which: no apptainer in ((null))
[2025-10-10 11:55:25] apptainer is not installed, using version from CVMFS
[2025-10-10 11:55:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 11:55:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2025-10-10 11:55:25] apptainer works
[2025-10-10 11:55:25] Set ATHENA_PROC_NUMBER=4
[2025-10-10 11:55:25] Set ATHENA_CORE_NUMBER=4
[2025-10-10 11:55:25] Starting ATLAS job with PandaID=6832972087
[2025-10-10 11:55:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 15:29:05]  *** The last 200 lines of the pilot log: ***
[2025-10-10 15:29:05] 2025-10-10 13:23:22,201 | INFO     | intersect: -12350387123.240177
[2025-10-10 15:29:05] 2025-10-10 13:23:22,202 | INFO     | chi2: 1.284982744308386
[2025-10-10 15:29:05] 2025-10-10 13:23:22,202 | INFO     | current chi2=1.284982744308386 (change=-0.06033979914421676 %)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,202 | INFO     | right removable region: 198
[2025-10-10 15:29:05] 2025-10-10 13:23:22,203 | INFO     | sum of square deviations: 2443580700.0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,205 | INFO     | sum of deviations: -2689666351.000001
[2025-10-10 15:29:05] 2025-10-10 13:23:22,205 | INFO     | mean x: 1760096508.0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,205 | INFO     | mean y: 2340395.703517588
[2025-10-10 15:29:05] 2025-10-10 13:23:22,205 | INFO     | -- intersect: 1939690920.7261631
[2025-10-10 15:29:05] 2025-10-10 13:23:22,205 | INFO     | intersect: 1939690920.7261631
[2025-10-10 15:29:05] 2025-10-10 13:23:22,206 | INFO     | chi2: 0.08565050418591923
[2025-10-10 15:29:05] 2025-10-10 13:23:22,206 | INFO     | current chi2=0.08565050418591923 (change=93.33047965758962 %)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,206 | INFO     | sum of square deviations: 2263977332.5
[2025-10-10 15:29:05] 2025-10-10 13:23:22,208 | INFO     | sum of deviations: 4612129236.000001
[2025-10-10 15:29:05] 2025-10-10 13:23:22,208 | INFO     | mean x: 1760096660.5
[2025-10-10 15:29:05] 2025-10-10 13:23:22,209 | INFO     | mean y: 2334180.6597938146
[2025-10-10 15:29:05] 2025-10-10 13:23:22,209 | INFO     | -- intersect: -3583299451.5965567
[2025-10-10 15:29:05] 2025-10-10 13:23:22,209 | INFO     | intersect: -3583299451.5965567
[2025-10-10 15:29:05] 2025-10-10 13:23:22,209 | INFO     | chi2: 0.028438563205510786
[2025-10-10 15:29:05] 2025-10-10 13:23:22,210 | INFO     | current chi2=0.028438563205510786 (change=66.79696929304704 %)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,210 | INFO     | sum of square deviations: 2093397390.0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,212 | INFO     | sum of deviations: 5541843533.999999
[2025-10-10 15:29:05] 2025-10-10 13:23:22,212 | INFO     | mean x: 1760096813.0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,212 | INFO     | mean y: 2333393.206349206
[2025-10-10 15:29:05] 2025-10-10 13:23:22,212 | INFO     | -- intersect: -4657164697.759579
[2025-10-10 15:29:05] 2025-10-10 13:23:22,212 | INFO     | intersect: -4657164697.759579
[2025-10-10 15:29:05] 2025-10-10 13:23:22,213 | INFO     | chi2: 0.0009605667626407864
[2025-10-10 15:29:05] 2025-10-10 13:23:22,213 | INFO     | current chi2=0.0009605667626407864 (change=96.62230909592981 %)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,214 | INFO     | sum of square deviations: 1931608310.0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,215 | INFO     | sum of deviations: 4620357861.499999
[2025-10-10 15:29:05] 2025-10-10 13:23:22,215 | INFO     | mean x: 1760096965.5
[2025-10-10 15:29:05] 2025-10-10 13:23:22,216 | INFO     | mean y: 2334260.211956522
[2025-10-10 15:29:05] 2025-10-10 13:23:22,216 | INFO     | -- intersect: -4207772835.2323666
[2025-10-10 15:29:05] 2025-10-10 13:23:22,216 | INFO     | intersect: -4207772835.2323666
[2025-10-10 15:29:05] 2025-10-10 13:23:22,216 | INFO     | chi2: 0.0006426785052985852
[2025-10-10 15:29:05] 2025-10-10 13:23:22,217 | INFO     | current chi2=0.0006426785052985852 (change=33.09382228344691 %)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,217 | INFO     | sum of square deviations: 1778377530.0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,219 | INFO     | sum of deviations: 3989682918.0000005
[2025-10-10 15:29:05] 2025-10-10 13:23:22,219 | INFO     | mean x: 1760097118.0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,219 | INFO     | mean y: 2334885.720670391
[2025-10-10 15:29:05] 2025-10-10 13:23:22,219 | INFO     | -- intersect: -3946337028.563824
[2025-10-10 15:29:05] 2025-10-10 13:23:22,220 | INFO     | intersect: -3946337028.563824
[2025-10-10 15:29:05] 2025-10-10 13:23:22,220 | INFO     | chi2: 0.000524688466334569
[2025-10-10 15:29:05] 2025-10-10 13:23:22,220 | INFO     | current chi2=0.000524688466334569 (change=18.3591077017892 %)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,220 | INFO     | left removable region: 50
[2025-10-10 15:29:05] 2025-10-10 13:23:22,221 | INFO     | sum of square deviations: 1005179777.0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,222 | INFO     | sum of deviations: 1913825254.5000005
[2025-10-10 15:29:05] 2025-10-10 13:23:22,222 | INFO     | mean x: 1760097697.5
[2025-10-10 15:29:05] 2025-10-10 13:23:22,222 | INFO     | mean y: 2337251.614864865
[2025-10-10 15:29:05] 2025-10-10 13:23:22,222 | INFO     | -- intersect: -3348823904.766818
[2025-10-10 15:29:05] 2025-10-10 13:23:22,222 | INFO     | intersect: -3348823904.766818
[2025-10-10 15:29:05] 2025-10-10 13:23:22,223 | INFO     | chi2: 0.0002956500213314832
[2025-10-10 15:29:05] 2025-10-10 13:23:22,223 | INFO     | -- intersect: -3348823904.766818
[2025-10-10 15:29:05] 2025-10-10 13:23:22,223 | INFO     | current memory leak: 1.90 B/s (using 148 data points, chi2=0.00)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,223 | INFO     | could have reported an average CPU frequency of 2504 MHz (10 samples)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,224 | INFO     | ..............................
[2025-10-10 15:29:05] 2025-10-10 13:23:22,224 | INFO     | . Timing measurements:
[2025-10-10 15:29:05] 2025-10-10 13:23:22,224 | INFO     | . get job = 0 s
[2025-10-10 15:29:05] 2025-10-10 13:23:22,224 | INFO     | . initial setup = 1 s
[2025-10-10 15:29:05] 2025-10-10 13:23:22,224 | INFO     | . payload setup = 5 s
[2025-10-10 15:29:05] 2025-10-10 13:23:22,224 | INFO     | . stage-in = 0 s
[2025-10-10 15:29:05] 2025-10-10 13:23:22,224 | INFO     | . payload execution = 12429 s
[2025-10-10 15:29:05] 2025-10-10 13:23:22,225 | INFO     | . stage-out = 1 s
[2025-10-10 15:29:05] 2025-10-10 13:23:22,225 | INFO     | . log creation = 0 s
[2025-10-10 15:29:05] 2025-10-10 13:23:22,225 | INFO     | ..............................
[2025-10-10 15:29:05] 2025-10-10 13:23:22,339 | INFO     | 
[2025-10-10 15:29:05] 2025-10-10 13:23:22,339 | INFO     | job summary report
[2025-10-10 15:29:05] 2025-10-10 13:23:22,340 | INFO     | --------------------------------------------------
[2025-10-10 15:29:05] 2025-10-10 13:23:22,340 | INFO     | PanDA job id: 6832972087
[2025-10-10 15:29:05] 2025-10-10 13:23:22,340 | INFO     | task id: 46376905
[2025-10-10 15:29:05] 2025-10-10 13:23:22,340 | INFO     | errors: (none)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,340 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 15:29:05] 2025-10-10 13:23:22,340 | INFO     | pilot state: finished 
[2025-10-10 15:29:05] 2025-10-10 13:23:22,341 | INFO     | transexitcode: 0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,341 | INFO     | exeerrorcode: 0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,341 | INFO     | exeerrordiag: 
[2025-10-10 15:29:05] 2025-10-10 13:23:22,341 | INFO     | exitcode: 0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,341 | INFO     | exitmsg: OK
[2025-10-10 15:29:05] 2025-10-10 13:23:22,341 | INFO     | cpuconsumptiontime: 45828 s
[2025-10-10 15:29:05] 2025-10-10 13:23:22,341 | INFO     | nevents: 400
[2025-10-10 15:29:05] 2025-10-10 13:23:22,342 | INFO     | neventsw: 0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,342 | INFO     | pid: 2861247
[2025-10-10 15:29:05] 2025-10-10 13:23:22,342 | INFO     | pgrp: 2861247
[2025-10-10 15:29:05] 2025-10-10 13:23:22,342 | INFO     | corecount: 4
[2025-10-10 15:29:05] 2025-10-10 13:23:22,342 | INFO     | event service: False
[2025-10-10 15:29:05] 2025-10-10 13:23:22,343 | INFO     | sizes: {0: 2348604, 1: 2348859, 5: 2349121, 12: 2349177, 12438: 2379179, 12439: 2379178, 12440: 2388382, 12443: 2388438, 12449: 2388660}
[2025-10-10 15:29:05] 2025-10-10 13:23:22,343 | INFO     | --------------------------------------------------
[2025-10-10 15:29:05] 2025-10-10 13:23:22,343 | INFO     | 
[2025-10-10 15:29:05] 2025-10-10 13:23:22,343 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-10-10 15:29:05] 2025-10-10 13:23:22,369 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,373 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,374 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 15:29:05] 2025-10-10 13:23:22,374 | INFO     | job 6832972087 has completed (purged errors)
[2025-10-10 15:29:05] 2025-10-10 13:23:22,374 | INFO     | overall cleanup function is called
[2025-10-10 15:29:05] 2025-10-10 13:23:23,382 | INFO     | --- collectZombieJob: --- 10, [2861247]
[2025-10-10 15:29:05] 2025-10-10 13:23:23,383 | INFO     | zombie collector waiting for pid 2861247
[2025-10-10 15:29:05] 2025-10-10 13:23:23,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 15:29:05] 2025-10-10 13:23:23,383 | INFO     | collected zombie processes
[2025-10-10 15:29:05] 2025-10-10 13:23:23,383 | INFO     | will attempt to kill all subprocesses of pid=2861247
[2025-10-10 15:29:05] 2025-10-10 13:23:23,802 | INFO     | process IDs to be killed: [2861247] (in reverse order)
[2025-10-10 15:29:05] 2025-10-10 13:23:23,897 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 15:29:05] 2025-10-10 13:23:23,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 15:29:05] 2025-10-10 13:23:23,909 | INFO     | did not find any defunct processes belonging to 2861247
[2025-10-10 15:29:05] 2025-10-10 13:23:23,920 | INFO     | did not find any defunct processes belonging to 2861247
[2025-10-10 15:29:05] 2025-10-10 13:23:23,921 | INFO     | ready for new job
[2025-10-10 15:29:05] 2025-10-10 13:23:23,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 15:29:05] 2025-10-10 13:23:23,924 | INFO     | ***************************************
[2025-10-10 15:29:05] 2025-10-10 13:23:23,924 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 15:29:05] 2025-10-10 13:23:23,924 | INFO     | ***************************************
[2025-10-10 15:29:05] 2025-10-10 13:23:23,925 | INFO     | 
[2025-10-10 15:29:05] 2025-10-10 13:23:23,928 | INFO     | architecture information:
[2025-10-10 15:29:05] 2025-10-10 13:23:23,928 | INFO     | executing command: cat /etc/os-release
[2025-10-10 15:29:05] 2025-10-10 13:23:23,947 | INFO     | cat /etc/os-release:
[2025-10-10 15:29:05] NAME="CentOS Linux"
[2025-10-10 15:29:05] VERSION="7 (Core)"
[2025-10-10 15:29:05] ID="centos"
[2025-10-10 15:29:05] ID_LIKE="rhel fedora"
[2025-10-10 15:29:05] VERSION_ID="7"
[2025-10-10 15:29:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 15:29:05] ANSI_COLOR="0;31"
[2025-10-10 15:29:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 15:29:05] HOME_URL="https://www.centos.org/"
[2025-10-10 15:29:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 15:29:05] 
[2025-10-10 15:29:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 15:29:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 15:29:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 15:29:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 15:29:05] 
[2025-10-10 15:29:05] 2025-10-10 13:23:23,948 | INFO     | ***************************************
[2025-10-10 15:29:05] 2025-10-10 13:23:24,451 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-10-10 15:29:05] 2025-10-10 13:23:24,467 | INFO     | sufficient remaining disk space (1677427998720 B)
[2025-10-10 15:29:05] 2025-10-10 13:23:24,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 15:29:05] 2025-10-10 13:23:24,468 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 15:29:05] 2025-10-10 13:23:24,468 | INFO     | update_server=False
[2025-10-10 15:29:05] 2025-10-10 13:23:24,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 15:29:05] 2025-10-10 13:23:24,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:29:05] 2025-10-10 13:23:24,469 | INFO     | aborting loop
[2025-10-10 15:29:05] 2025-10-10 13:23:24,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 15:29:05] 2025-10-10 13:23:24,659 | INFO     | all payload control threads have been joined
[2025-10-10 15:29:05] 2025-10-10 13:23:25,139 | INFO     | all job control threads have been joined
[2025-10-10 15:29:05] 2025-10-10 13:23:25,239 | INFO     | all data control threads have been joined
[2025-10-10 15:29:05] 2025-10-10 13:23:25,473 | INFO     | [job] retrieve thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:25,473 | INFO     | [job] job monitor thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:25,578 | INFO     | [data] copytool_in thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:25,623 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:25,637 | INFO     | [payload] validate_post thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:25,664 | INFO     | [payload] control thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:26,012 | INFO     | [payload] failed_post thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:26,063 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:26,144 | INFO     | [job] control thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:26,195 | INFO     | [job] validate thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:26,244 | INFO     | [data] control thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:26,250 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:26,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:26,470 | INFO     | [data] copytool_out thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:26,759 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 15:29:05] 2025-10-10 13:23:27,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:29:05] 2025-10-10 13:23:28,353 | INFO     | [job] queue monitor thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:30,764 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 15:29:05] 2025-10-10 13:23:55,391 | INFO     | PID=2854160 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 15:29:05] 2025-10-10 13:23:55,392 | INFO     | .. there are 4 such processes running
[2025-10-10 15:29:05] 2025-10-10 13:23:55,393 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 15:29:05] 2025-10-10 13:23:55,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 15:29:05] 2025-10-10 13:23:55,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 15:29:05] 2025-10-10 13:23:57,623 | INFO     | [monitor] cgroup control has ended
[2025-10-10 15:29:05] 2025-10-10 13:23:58,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22697322030912)>', '<ExcThread(monitor, started 22697010501376)>']
[2025-10-10 15:29:05] 2025-10-10 13:23:58,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 15:29:05] 2025-10-10 13:23:58,409 | INFO     | [monitor] control thread has ended
[2025-10-10 15:29:05] 2025-10-10 13:24:03,033 | INFO     | all workflow threads have been joined
[2025-10-10 15:29:05] 2025-10-10 13:24:03,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 15:29:05] 2025-10-10 13:24:03,034 | INFO     | traces error code: 0
[2025-10-10 15:29:05] 2025-10-10 13:24:03,034 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 15:29:05] 2025-10-10 13:24:03,194 [wrapper] ==== pilot stdout END ====
[2025-10-10 15:29:05] 2025-10-10 13:24:03,196 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 15:29:05] 2025-10-10 13:24:03,199 [wrapper] pilotpid: 2854160
[2025-10-10 15:29:05] 2025-10-10 13:24:03,201 [wrapper] Pilot exit status: 0
[2025-10-10 15:29:05] 2025-10-10 13:24:03,212 [wrapper] pandaids: 6832972087
[2025-10-10 15:29:05] 2025-10-10 13:24:03,273 [wrapper] cleanup supervisor_pilot 3028206 2854161
[2025-10-10 15:29:05] 2025-10-10 13:24:03,276 [wrapper] Test setup, not cleaning
[2025-10-10 15:29:05] 2025-10-10 13:24:03,279 [wrapper] apfmon messages muted
[2025-10-10 15:29:05] 2025-10-10 13:24:03,282 [wrapper] ==== wrapper stdout END ====
[2025-10-10 15:29:05] 2025-10-10 13:24:03,284 [wrapper] ==== wrapper stderr END ====
[2025-10-10 15:29:05]  *** Error codes and diagnostics ***
[2025-10-10 15:29:05]     "exeErrorCode": 0,
[2025-10-10 15:29:05]     "exeErrorDiag": "",
[2025-10-10 15:29:05]     "pilotErrorCode": 0,
[2025-10-10 15:29:05]     "pilotErrorDiag": "",
[2025-10-10 15:29:05]  *** Listing of results directory ***
[2025-10-10 15:29:05] total 390956
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc    552446 Oct  6 21:47 pilot3.tar.gz
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc      5112 Oct  6 22:15 queuedata.json
[2025-10-10 15:29:05] -rwx------ 1 boinc boinc     36292 Oct  6 22:15 runpilot2-wrapper.sh
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc       100 Oct 10 11:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 15:29:05] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 11:43 run_atlas
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc       105 Oct 10 11:43 job.xml
[2025-10-10 15:29:05] -rw-r--r-- 2 boinc boinc 212795115 Oct 10 11:55 EVNT.46376901._004390.pool.root.1
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc      6421 Oct 10 11:55 init_data.xml
[2025-10-10 15:29:05] drwxrwx--x 2 boinc boinc      4096 Oct 10 11:55 shared
[2025-10-10 15:29:05] -rw-r--r-- 2 boinc boinc    565604 Oct 10 11:55 input.tar.gz
[2025-10-10 15:29:05] -rw-r--r-- 2 boinc boinc     15120 Oct 10 11:55 start_atlas.sh
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc         0 Oct 10 11:55 boinc_lockfile
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc      2521 Oct 10 11:55 pandaJob.out
[2025-10-10 15:29:05] -rw------- 1 boinc boinc    975511 Oct 10 11:55 agis_schedconf.cvmfs.json
[2025-10-10 15:29:05] drwx------ 4 boinc boinc      4096 Oct 10 11:55 pilot3
[2025-10-10 15:29:05] -rw------- 1 boinc boinc 179348847 Oct 10 15:22 HITS.46376905._118407.pool.root.1
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc       527 Oct 10 15:22 boinc_task_state.xml
[2025-10-10 15:29:05] -rw------- 1 boinc boinc      1033 Oct 10 15:23 memory_monitor_summary.json
[2025-10-10 15:29:05] -rw------- 1 boinc boinc   1560580 Oct 10 15:23 agis_ddmendpoints.agis.ALL.json
[2025-10-10 15:29:05] -rw------- 1 boinc boinc    390616 Oct 10 15:23 log.46376905._118407.job.log.tgz.1
[2025-10-10 15:29:05] -rw------- 1 boinc boinc      7834 Oct 10 15:23 heartbeat.json
[2025-10-10 15:29:05] -rw------- 1 boinc boinc        95 Oct 10 15:23 pilot_heartbeat.json
[2025-10-10 15:29:05] -rw------- 1 boinc boinc      4834 Oct 10 15:24 pilotlog.txt
[2025-10-10 15:29:05] -rw------- 1 boinc boinc   1760420 Oct 10 15:24 log.46376905._118407.job.log.1
[2025-10-10 15:29:05] -rw------- 1 boinc boinc       357 Oct 10 15:24 output.list
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc       620 Oct 10 15:24 runtime_log
[2025-10-10 15:29:05] -rw------- 1 boinc boinc   2170880 Oct 10 15:24 result.tar.gz
[2025-10-10 15:29:05] -rw------- 1 boinc boinc       665 Oct 10 15:24 3teMDmfn6P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDbUNDmtSU2Wm.diag
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc      9070 Oct 10 15:24 runtime_log.err
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc        26 Oct 10 15:28 wrapper_checkpoint.txt
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc      8192 Oct 10 15:29 boinc_mmap_file
[2025-10-10 15:29:05] -rw-r--r-- 1 boinc boinc     20758 Oct 10 15:29 stderr.txt
[2025-10-10 15:29:05] HITS file was successfully produced:
[2025-10-10 15:29:05] -rw------- 1 boinc boinc 179348847 Oct 10 15:22 shared/HITS.pool.root.1
[2025-10-10 15:29:05]  *** Contents of shared directory: ***
[2025-10-10 15:29:05] total 385656
[2025-10-10 15:29:05] -rw-r--r-- 2 boinc boinc 212795115 Oct 10 11:55 ATLAS.root_0
[2025-10-10 15:29:05] -rw-r--r-- 2 boinc boinc    565604 Oct 10 11:55 input.tar.gz
[2025-10-10 15:29:05] -rw-r--r-- 2 boinc boinc     15120 Oct 10 11:55 start_atlas.sh
[2025-10-10 15:29:05] -rw------- 1 boinc boinc 179348847 Oct 10 15:22 HITS.pool.root.1
[2025-10-10 15:29:05] -rw------- 1 boinc boinc   2170880 Oct 10 15:24 result.tar.gz
15:29:07 (2850150): run_atlas exited; CPU time 46267.536310
15:29:07 (2850150): called boinc_finish(0)

</stderr_txt>
]]>

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