Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:04:15 (1238159): wrapper (7.7.26015): starting
16:04:15 (1238159): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 16:04:15] Arguments: --nthreads 12
[2025-10-06 16:04:15] Threads: 12
[2025-10-06 16:04:15] Checking for CVMFS
[2025-10-06 16:04:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 16:04:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 16:04:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 16:04:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 16:04:16] 2.11.5.0 2672 23491 220760 151415 3 197 35046037 45568000 15044 130560 0 224573490 99.856 102148423 25914 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 16:04:16] CVMFS is ok
[2025-10-06 16:04:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 16:04:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 16:04:16] Further information can be found at the LHC@home message board.
[2025-10-06 16:04:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 16:04:16] Checking for apptainer binary...
[2025-10-06 16:04:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 16:04:16] Running /usr/bin/apptainer --version
[2025-10-06 16:04:16] apptainer version 1.4.1-1.el9
[2025-10-06 16:04:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 16:04:16] wns0046.triumf.lcg
[2025-10-06 16:04:16] apptainer works
[2025-10-06 16:04:16] Set ATHENA_PROC_NUMBER=12
[2025-10-06 16:04:16] Set ATHENA_CORE_NUMBER=12
[2025-10-06 16:04:16] Starting ATLAS job with PandaID=6832973973
[2025-10-06 16:04:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 16:08:42]  *** The last 200 lines of the pilot log: ***
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | WARNING  | found no stored workdir sizes
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | WARNING  | wrong length of table data, x=[1759791916.0], y=[2061.0] (must be same and length>=4)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | could have reported an average CPU frequency of 2572 MHz (4 samples)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | ..............................
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . Timing measurements:
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . get job = 0 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . initial setup = 3 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . payload setup = 8 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . stage-in = 0 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . payload execution = 28 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . stage-out = 1 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . log creation = 0 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | ..............................
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 16:08:42] 2025-10-06 23:07:46,444 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832973973/pilotlog.txt
[2025-10-06 16:08:42] 2025-10-06 23:07:46,523 | INFO     | time since job start (190s) is within the limit (172800.0s)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,530 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 16:08:42] - Log from pilotlog.txt -
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | WARNING  | found no stored workdir sizes
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | WARNING  | wrong length of table data, x=[1759791916.0], y=[2061.0] (must be same and length>=4)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | could have reported an average CPU frequency of 2572 MHz (4 samples)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | ..............................
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . Timing measurements:
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . get job = 0 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . initial setup = 3 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . payload setup = 8 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . stage-in = 0 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . payload execution = 28 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . stage-out = 1 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . log creation = 0 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | ..............................
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 16:08:42] 2025-10-06 23:07:46,444 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832973973/pilotlog.txt
[2025-10-06 16:08:42] 2025-10-06 23:07:46,523 | INFO     | time since job start (190s) is within the limit (172800.0s)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,530 | WARNING  | 
[2025-10-06 16:08:42] [begin log extracts]
[2025-10-06 16:08:42] - Log from pilotlog.txt -
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | WARNING  | found no stored workdir sizes
[2025-10-06 16:08:42] 2025-10-06 23:07:46,442 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | WARNING  | wrong length of table data, x=[1759791916.0], y=[2061.0] (must be same and length>=4)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | could have reported an average CPU frequency of 2572 MHz (4 samples)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | ..............................
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . Timing measurements:
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . get job = 0 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . initial setup = 3 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . payload setup = 8 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . stage-in = 0 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . payload execution = 28 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . stage-out = 1 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | . log creation = 0 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | ..............................
[2025-10-06 16:08:42] 2025-10-06 23:07:46,443 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 16:08:42] 2025-10-06 23:07:46,444 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832973973/pilotlog.txt
[2025-10-06 16:08:42] 2025-10-06 23:07:46,523 | INFO     | time since job start (190s) is within the limit (172800.0s)
[2025-10-06 16:08:42] [end log extracts]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,530 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,531 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | 
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | job summary report
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | --------------------------------------------------
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | PanDA job id: 6832973973
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | task id: 46376905
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 16:05:29,328 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | pilot state: failed 
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | transexitcode: 65
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | exeerrorcode: 65
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | exitcode: 65
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | cpuconsumptiontime: 16 s
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | nevents: 0
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | neventsw: 0
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | pid: 1248395
[2025-10-06 16:08:42] 2025-10-06 23:07:46,591 | INFO     | pgrp: 1248395
[2025-10-06 16:08:42] 2025-10-06 23:07:46,592 | INFO     | corecount: 12
[2025-10-06 16:08:42] 2025-10-06 23:07:46,592 | INFO     | event service: False
[2025-10-06 16:08:42] 2025-10-06 23:07:46,592 | INFO     | sizes: {0: 2347992, 1: 2348845, 11: 2349107, 12: 2349135, 41: 2372278, 43: 2376570, 45: 2376726, 171: 2376892}
[2025-10-06 16:08:42] 2025-10-06 23:07:46,592 | INFO     | --------------------------------------------------
[2025-10-06 16:08:42] 2025-10-06 23:07:46,592 | INFO     | 
[2025-10-06 16:08:42] 2025-10-06 23:07:46,592 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 16:08:42] 2025-10-06 23:07:46,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 16:08:42] 2025-10-06 23:07:46,608 | INFO     | job 6832973973 has completed (purged errors)
[2025-10-06 16:08:42] 2025-10-06 23:07:46,608 | INFO     | overall cleanup function is called
[2025-10-06 16:08:42] 2025-10-06 23:07:47,615 | INFO     | --- collectZombieJob: --- 10, [1248395]
[2025-10-06 16:08:42] 2025-10-06 23:07:47,616 | INFO     | zombie collector waiting for pid 1248395
[2025-10-06 16:08:42] 2025-10-06 23:07:47,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 16:08:42] 2025-10-06 23:07:47,616 | INFO     | collected zombie processes
[2025-10-06 16:08:42] 2025-10-06 23:07:47,616 | INFO     | will attempt to kill all subprocesses of pid=1248395
[2025-10-06 16:08:42] 2025-10-06 23:07:48,117 | INFO     | process IDs to be killed: [1248395] (in reverse order)
[2025-10-06 16:08:42] 2025-10-06 23:07:48,178 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 16:08:42] 2025-10-06 23:07:48,179 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 16:08:42] 2025-10-06 23:07:48,186 | INFO     | did not find any defunct processes belonging to 1248395
[2025-10-06 16:08:42] 2025-10-06 23:07:48,193 | INFO     | did not find any defunct processes belonging to 1248395
[2025-10-06 16:08:42] 2025-10-06 23:07:48,193 | INFO     | ready for new job
[2025-10-06 16:08:42] 2025-10-06 23:07:48,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 16:08:42] 2025-10-06 23:07:48,194 | INFO     | ***************************************
[2025-10-06 16:08:42] 2025-10-06 23:07:48,194 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 16:08:42] 2025-10-06 23:07:48,194 | INFO     | ***************************************
[2025-10-06 16:08:42] 2025-10-06 23:07:48,194 | INFO     | 
[2025-10-06 16:08:42] 2025-10-06 23:07:48,196 | INFO     | architecture information:
[2025-10-06 16:08:42] 2025-10-06 23:07:48,197 | INFO     | executing command: cat /etc/os-release
[2025-10-06 16:08:42] 2025-10-06 23:07:48,210 | INFO     | cat /etc/os-release:
[2025-10-06 16:08:42] NAME="CentOS Linux"
[2025-10-06 16:08:42] VERSION="7 (Core)"
[2025-10-06 16:08:42] ID="centos"
[2025-10-06 16:08:42] ID_LIKE="rhel fedora"
[2025-10-06 16:08:42] VERSION_ID="7"
[2025-10-06 16:08:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 16:08:42] ANSI_COLOR="0;31"
[2025-10-06 16:08:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 16:08:42] HOME_URL="https://www.centos.org/"
[2025-10-06 16:08:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 16:08:42] 
[2025-10-06 16:08:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 16:08:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 16:08:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 16:08:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 16:08:42] 
[2025-10-06 16:08:42] 2025-10-06 23:07:48,211 | INFO     | ***************************************
[2025-10-06 16:08:42] 2025-10-06 23:07:48,714 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 16:08:42] 2025-10-06 23:07:48,781 | INFO     | sufficient remaining disk space (2137057656832 B)
[2025-10-06 16:08:42] 2025-10-06 23:07:48,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 16:08:42] 2025-10-06 23:07:48,782 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 16:08:42] 2025-10-06 23:07:48,782 | INFO     | update_server=False
[2025-10-06 16:08:42] 2025-10-06 23:07:48,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 16:08:42] 2025-10-06 23:07:48,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 16:08:42] 2025-10-06 23:07:48,782 | INFO     | aborting loop
[2025-10-06 16:08:42] 2025-10-06 23:07:49,063 | INFO     | all data control threads have been joined
[2025-10-06 16:08:42] 2025-10-06 23:07:49,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 16:08:42] 2025-10-06 23:07:49,414 | INFO     | all job control threads have been joined
[2025-10-06 16:08:42] 2025-10-06 23:07:49,484 | INFO     | all payload control threads have been joined
[2025-10-06 16:08:42] 2025-10-06 23:07:49,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 16:08:42] 2025-10-06 23:07:49,787 | INFO     | [job] retrieve thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:49,788 | INFO     | [job] job monitor thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:49,797 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:50,062 | INFO     | [payload] failed_post thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:50,069 | INFO     | [data] control thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:50,390 | INFO     | [data] copytool_in thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:50,420 | INFO     | [job] control thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:50,490 | INFO     | [payload] control thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:50,540 | INFO     | [job] validate thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:50,615 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:50,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:51,180 | INFO     | [payload] validate_post thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:51,287 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:51,604 | INFO     | [data] copytool_out thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:51,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 16:08:42] 2025-10-06 23:07:52,611 | INFO     | [job] queue monitor thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:07:53,303 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 16:08:42] 2025-10-06 23:08:19,822 | INFO     | PID=1241816 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 16:08:42] 2025-10-06 23:08:19,822 | INFO     | .. there are 21 such processes running
[2025-10-06 16:08:42] 2025-10-06 23:08:19,822 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 16:08:42] 2025-10-06 23:08:19,822 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 16:08:42] 2025-10-06 23:08:19,822 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 16:08:42] 2025-10-06 23:08:35,755 | INFO     | [monitor] cgroup control has ended
[2025-10-06 16:08:42] 2025-10-06 23:08:37,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183220176704)>', '<ExcThread(monitor, started 140182665803520)>']
[2025-10-06 16:08:42] 2025-10-06 23:08:37,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 16:08:42] 2025-10-06 23:08:37,912 | INFO     | [monitor] control thread has ended
[2025-10-06 16:08:42] 2025-10-06 23:08:42,664 | INFO     | all workflow threads have been joined
[2025-10-06 16:08:42] 2025-10-06 23:08:42,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 16:08:42] 2025-10-06 23:08:42,665 | INFO     | traces error code: 0
[2025-10-06 16:08:42] 2025-10-06 23:08:42,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 16:08:42] 2025-10-06 23:08:42,766 [wrapper] ==== pilot stdout END ====
[2025-10-06 16:08:42] 2025-10-06 23:08:42,768 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 16:08:42] 2025-10-06 23:08:42,770 [wrapper] pilotpid: 1241816
[2025-10-06 16:08:42] 2025-10-06 23:08:42,772 [wrapper] Pilot exit status: 0
[2025-10-06 16:08:42] 2025-10-06 23:08:42,778 [wrapper] pandaids: 6832973973
[2025-10-06 16:08:42] 2025-10-06 23:08:42,816 [wrapper] cleanup supervisor_pilot 1241822 1241817
[2025-10-06 16:08:42] 2025-10-06 23:08:42,818 [wrapper] Test setup, not cleaning
[2025-10-06 16:08:42] 2025-10-06 23:08:42,820 [wrapper] apfmon messages muted
[2025-10-06 16:08:42] 2025-10-06 23:08:42,822 [wrapper] ==== wrapper stdout END ====
[2025-10-06 16:08:42] 2025-10-06 23:08:42,823 [wrapper] ==== wrapper stderr END ====
[2025-10-06 16:08:42]  *** Error codes and diagnostics ***
[2025-10-06 16:08:42]     "exeErrorCode": 65,
[2025-10-06 16:08:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 16:08:42]     "pilotErrorCode": 1305,
[2025-10-06 16:08:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 16:08:42]  *** Listing of results directory ***
[2025-10-06 16:08:42] total 211996
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc    552446 Oct  6 14:13 pilot3.tar.gz
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc      5112 Oct  6 14:20 queuedata.json
[2025-10-06 16:08:42] -rwx------. 1 boinc boinc     36292 Oct  6 14:21 runpilot2-wrapper.sh
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc       100 Oct  6 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 16:08:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 16:04 run_atlas
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc       105 Oct  6 16:04 job.xml
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc      6594 Oct  6 16:04 init_data.xml
[2025-10-06 16:08:42] -rw-r--r--. 2 boinc boinc 212990880 Oct  6 16:04 EVNT.46376901._004446.pool.root.1
[2025-10-06 16:08:42] -rw-r--r--. 2 boinc boinc     15120 Oct  6 16:04 start_atlas.sh
[2025-10-06 16:08:42] drwxrwx--x. 2 boinc boinc      4096 Oct  6 16:04 shared
[2025-10-06 16:08:42] -rw-r--r--. 2 boinc boinc    565604 Oct  6 16:04 input.tar.gz
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc         0 Oct  6 16:04 boinc_lockfile
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc      2521 Oct  6 16:04 pandaJob.out
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc    975012 Oct  6 16:04 agis_schedconf.cvmfs.json
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc   1560401 Oct  6 16:04 agis_ddmendpoints.agis.ALL.json
[2025-10-06 16:08:42] drwx------. 4 boinc boinc      4096 Oct  6 16:04 pilot3
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc       522 Oct  6 16:05 boinc_task_state.xml
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc       951 Oct  6 16:05 memory_monitor_summary.json
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc     21287 Oct  6 16:05 log.46376905._119803.job.log.tgz.1
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc        95 Oct  6 16:07 pilot_heartbeat.json
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc      8377 Oct  6 16:07 heartbeat.json
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc        22 Oct  6 16:08 wrapper_checkpoint.txt
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc      8192 Oct  6 16:08 boinc_mmap_file
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc      4823 Oct  6 16:08 pilotlog.txt
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc     85427 Oct  6 16:08 log.46376905._119803.job.log.1
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc       188 Oct  6 16:08 output.list
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc       620 Oct  6 16:08 runtime_log
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc    122880 Oct  6 16:08 result.tar.gz
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc      8528 Oct  6 16:08 runtime_log.err
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc       646 Oct  6 16:08 hewMDmpo7P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0nUNDmP5Mhem.diag
[2025-10-06 16:08:42] -rw-r--r--. 1 boinc boinc     21687 Oct  6 16:08 stderr.txt
[2025-10-06 16:08:42] No HITS result produced
[2025-10-06 16:08:42]  *** Contents of shared directory: ***
[2025-10-06 16:08:42] total 208692
[2025-10-06 16:08:42] -rw-r--r--. 2 boinc boinc 212990880 Oct  6 16:04 ATLAS.root_0
[2025-10-06 16:08:42] -rw-r--r--. 2 boinc boinc     15120 Oct  6 16:04 start_atlas.sh
[2025-10-06 16:08:42] -rw-r--r--. 2 boinc boinc    565604 Oct  6 16:04 input.tar.gz
[2025-10-06 16:08:42] -rw-------. 1 boinc boinc    122880 Oct  6 16:08 result.tar.gz
16:08:44 (1238159): run_atlas exited; CPU time 23.359983
16:08:44 (1238159): called boinc_finish(0)

</stderr_txt>
]]>

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