Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
02:18:54 (18946): wrapper (7.7.26015): starting
02:18:54 (18946): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 02:18:54] Arguments: --nthreads 8
[2025-10-07 02:18:54] Threads: 8
[2025-10-07 02:18:54] Checking for CVMFS
[2025-10-07 02:18:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 02:18:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 02:18:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 02:18:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 02:18:55] 2.11.0.0 8633 26639 56796 151417 1 188 3225026 4096000 4541 130560 0 3394809 99.785 1449185 221 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-07 02:18:55] CVMFS is ok
[2025-10-07 02:18:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 02:18:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 02:18:55] Further information can be found at the LHC@home message board.
[2025-10-07 02:18:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 02:18:55] Checking for apptainer binary...
[2025-10-07 02:18:55] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-07 02:18:55] apptainer is not installed, using version from CVMFS
[2025-10-07 02:18:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 02:18:55] WARNING: Environment variable TMPDIR already has value [/tmp/job_10281408/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node074
[2025-10-07 02:18:55] apptainer works
[2025-10-07 02:18:55] Set ATHENA_PROC_NUMBER=8
[2025-10-07 02:18:55] Set ATHENA_CORE_NUMBER=8
[2025-10-07 02:18:55] Starting ATLAS job with PandaID=6832973434
[2025-10-07 02:18:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10281408/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 03:03:17]  *** The last 200 lines of the pilot log: ***
[2025-10-07 03:03:17]  is_altstaged=None
[2025-10-07 03:03:17]  is_tar=False
[2025-10-07 03:03:17]  lfn=log.46376905._119379.job.log.tgz.1
[2025-10-07 03:03:17]  mtime=0
[2025-10-07 03:03:17]  protocol_id=None
[2025-10-07 03:03:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-07 03:03:17]  replicas=None
[2025-10-07 03:03:17]  scope=mc23_13p6TeV
[2025-10-07 03:03:17]  status=None
[2025-10-07 03:03:17]  status_code=0
[2025-10-07 03:03:17]  storage_token=
[2025-10-07 03:03:17]  surl=/tmp/job_10281408/atlas/pilot/slots/0/PanDA_Pilot-6832973434/log.46376905._119379.job.log.tgz.1
[2025-10-07 03:03:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/1b/log.46376905._119379.job.log.tgz.1
[2025-10-07 03:03:17]  workdir=None
[2025-10-07 03:03:17] ]
[2025-10-07 03:03:17] 2025-10-07 01:02:55,287 | INFO     | transferring file log.46376905._119379.job.log.tgz.1 from /tmp/job_10281408/atlas/pilot/slots/0/PanDA_Pilot-6832973434/log.46376905._119379.job.log.tgz.1 to /tmp/j
[2025-10-07 03:03:17] 2025-10-07 01:02:55,287 | INFO     | executing command: /usr/bin/env mv /tmp/job_10281408/atlas/pilot/slots/0/PanDA_Pilot-6832973434/log.46376905._119379.job.log.tgz.1 /tmp/job_10281408/atlas/pilot/sl
[2025-10-07 03:03:17] 2025-10-07 01:02:55,295 | INFO     | adding to output.list: log.46376905._119379.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/1b/log.46376905._119379.job.log.tg
[2025-10-07 03:03:17] 2025-10-07 01:02:55,295 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 03:03:17] 2025-10-07 01:02:55,295 | INFO     | summary of transferred files:
[2025-10-07 03:03:17] 2025-10-07 01:02:55,295 | INFO     |  -- lfn=log.46376905._119379.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 03:03:17] 2025-10-07 01:02:55,295 | INFO     | stage-out finished correctly
[2025-10-07 03:03:17] 2025-10-07 01:02:55,346 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 03:03:17] 2025-10-07 01:02:56,359 | INFO     | time since job start (2637s) is within the limit (172800.0s)
[2025-10-07 03:03:17] 2025-10-07 01:02:56,596 | INFO     | job 6832973434 has state=finished
[2025-10-07 03:03:17] 2025-10-07 01:02:56,596 | INFO     | preparing for final server update for job 6832973434 in state='finished'
[2025-10-07 03:03:17] 2025-10-07 01:02:56,597 | INFO     | this job has now completed (state=finished)
[2025-10-07 03:03:17] 2025-10-07 01:02:56,597 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 03:03:17] 2025-10-07 01:02:56,597 | INFO     | log transfer has been attempted: DONE
[2025-10-07 03:03:17] 2025-10-07 01:02:56,597 | INFO     | job 6832973434 has finished - writing final server update
[2025-10-07 03:03:17] 2025-10-07 01:02:56,597 | INFO     | total number of processed events: 400 (read)
[2025-10-07 03:03:17] 2025-10-07 01:02:56,597 | INFO     | executing command: lscpu
[2025-10-07 03:03:17] 2025-10-07 01:02:56,628 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 03:03:17] 2025-10-07 01:02:56,938 | INFO     | monitor loop #198: job 0:6832973434 is in state 'finished'
[2025-10-07 03:03:17] 2025-10-07 01:02:56,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 03:03:17] 2025-10-07 01:02:58,362 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 03:03:17] 2025-10-07 01:02:58,364 | INFO     | time since job start (2639s) is within the limit (172800.0s)
[2025-10-07 03:03:17] 2025-10-07 01:02:58,367 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2552.109203125
[2025-10-07 03:03:17] 2025-10-07 01:02:58,372 | INFO     | using path: /tmp/job_10281408/atlas/pilot/slots/0/PanDA_Pilot-6832973434/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 03:03:17] 2025-10-07 01:02:58,372 | INFO     | extracted standard info from prmon json
[2025-10-07 03:03:17] 2025-10-07 01:02:58,372 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 03:03:17] 2025-10-07 01:02:58,372 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 03:03:17] 2025-10-07 01:02:58,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 03:03:17] 2025-10-07 01:02:58,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 03:03:17] 2025-10-07 01:02:58,373 | INFO     | fitting pss+swap vs Time
[2025-10-07 03:03:17] 2025-10-07 01:02:58,373 | INFO     | sum of square deviations: 14456085.0
[2025-10-07 03:03:17] 2025-10-07 01:02:58,373 | INFO     | sum of deviations: 543746619.0
[2025-10-07 03:03:17] 2025-10-07 01:02:58,373 | INFO     | mean x: 1759797729.5
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | mean y: 2731073.6666666665
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | -- intersect: -66189745349.894875
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | intersect: -66189745349.894875
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | chi2: 0.002224690867411787
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | -- intersect: -66189745349.894875
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | current memory leak: 37.61 B/s (using 36 data points, chi2=0.00)
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | could have reported an average CPU frequency of 2735 MHz (5 samples)
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | ..............................
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | . Timing measurements:
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | . get job = 0 s
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | . initial setup = 1 s
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | . payload setup = 2 s
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | . stage-in = 0 s
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | . payload execution = 2617 s
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | . stage-out = 0 s
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | . log creation = 0 s
[2025-10-07 03:03:17] 2025-10-07 01:02:58,374 | INFO     | ..............................
[2025-10-07 03:03:17] 2025-10-07 01:02:58,526 | INFO     | 
[2025-10-07 03:03:17] 2025-10-07 01:02:58,526 | INFO     | job summary report
[2025-10-07 03:03:17] 2025-10-07 01:02:58,526 | INFO     | --------------------------------------------------
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | PanDA job id: 6832973434
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | task id: 46376905
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | errors: (none)
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | pilot state: finished 
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | transexitcode: 0
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | exeerrorcode: 0
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | exeerrordiag: 
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | exitcode: 0
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | exitmsg: OK
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | cpuconsumptiontime: 19185 s
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | nevents: 400
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | neventsw: 0
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | pid: 31784
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | pgrp: 31784
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | corecount: 8
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | event service: False
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | sizes: {0: 2348608, 1: 2348974, 3: 2349236, 11: 2349264, 2622: 2374614, 2623: 2383826, 2626: 2383996}
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | --------------------------------------------------
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | 
[2025-10-07 03:03:17] 2025-10-07 01:02:58,527 | INFO     | executing command: ls -lF /tmp/job_10281408/atlas/pilot/slots/0
[2025-10-07 03:03:17] 2025-10-07 01:02:58,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | job 6832973434 has completed (purged errors)
[2025-10-07 03:03:17] 2025-10-07 01:02:58,536 | INFO     | overall cleanup function is called
[2025-10-07 03:03:17] 2025-10-07 01:02:59,542 | INFO     | --- collectZombieJob: --- 10, [31784]
[2025-10-07 03:03:17] 2025-10-07 01:02:59,542 | INFO     | zombie collector waiting for pid 31784
[2025-10-07 03:03:17] 2025-10-07 01:02:59,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 03:03:17] 2025-10-07 01:02:59,542 | INFO     | collected zombie processes
[2025-10-07 03:03:17] 2025-10-07 01:02:59,542 | INFO     | will attempt to kill all subprocesses of pid=31784
[2025-10-07 03:03:17] 2025-10-07 01:02:59,639 | INFO     | process IDs to be killed: [31784] (in reverse order)
[2025-10-07 03:03:17] 2025-10-07 01:02:59,673 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 03:03:17] 2025-10-07 01:02:59,673 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 03:03:17] 2025-10-07 01:02:59,677 | INFO     | did not find any defunct processes belonging to 31784
[2025-10-07 03:03:17] 2025-10-07 01:02:59,680 | INFO     | did not find any defunct processes belonging to 31784
[2025-10-07 03:03:17] 2025-10-07 01:02:59,680 | INFO     | ready for new job
[2025-10-07 03:03:17] 2025-10-07 01:02:59,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 03:03:17] 2025-10-07 01:02:59,681 | INFO     | ***************************************
[2025-10-07 03:03:17] 2025-10-07 01:02:59,681 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 03:03:17] 2025-10-07 01:02:59,681 | INFO     | ***************************************
[2025-10-07 03:03:17] 2025-10-07 01:02:59,681 | INFO     | 
[2025-10-07 03:03:17] 2025-10-07 01:02:59,695 | INFO     | architecture information:
[2025-10-07 03:03:17] 2025-10-07 01:02:59,696 | INFO     | executing command: cat /etc/os-release
[2025-10-07 03:03:17] 2025-10-07 01:02:59,701 | INFO     | cat /etc/os-release:
[2025-10-07 03:03:17] NAME="CentOS Linux"
[2025-10-07 03:03:17] VERSION="7 (Core)"
[2025-10-07 03:03:17] ID="centos"
[2025-10-07 03:03:17] ID_LIKE="rhel fedora"
[2025-10-07 03:03:17] VERSION_ID="7"
[2025-10-07 03:03:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 03:03:17] ANSI_COLOR="0;31"
[2025-10-07 03:03:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 03:03:17] HOME_URL="https://www.centos.org/"
[2025-10-07 03:03:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 03:03:17] 
[2025-10-07 03:03:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 03:03:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 03:03:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 03:03:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 03:03:17] 
[2025-10-07 03:03:17] 2025-10-07 01:02:59,702 | INFO     | ***************************************
[2025-10-07 03:03:17] 2025-10-07 01:03:00,204 | INFO     | executing command: df -mP /tmp/job_10281408/atlas/pilot/slots/0
[2025-10-07 03:03:17] 2025-10-07 01:03:00,210 | INFO     | sufficient remaining disk space (225838104576 B)
[2025-10-07 03:03:17] 2025-10-07 01:03:00,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 03:03:17] 2025-10-07 01:03:00,210 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 03:03:17] 2025-10-07 01:03:00,210 | INFO     | update_server=False
[2025-10-07 03:03:17] 2025-10-07 01:03:00,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 03:03:17] 2025-10-07 01:03:00,210 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-07 03:03:17] 2025-10-07 01:03:00,211 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 03:03:17] 2025-10-07 01:03:00,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 03:03:17] 2025-10-07 01:03:00,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 03:03:17] 2025-10-07 01:03:00,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 03:03:17] 2025-10-07 01:03:00,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 03:03:17] 2025-10-07 01:03:00,446 | INFO     | aborting loop
[2025-10-07 03:03:17] 2025-10-07 01:03:00,450 | INFO     | all payload control threads have been joined
[2025-10-07 03:03:17] 2025-10-07 01:03:00,486 | INFO     | all job control threads have been joined
[2025-10-07 03:03:17] 2025-10-07 01:03:00,752 | INFO     | all data control threads have been joined
[2025-10-07 03:03:17] 2025-10-07 01:03:00,853 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 03:03:17] 2025-10-07 01:03:01,216 | INFO     | [job] retrieve thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:01,216 | INFO     | [job] queue monitor thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:01,220 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:01,367 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:01,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 03:03:17] 2025-10-07 01:03:01,450 | INFO     | [payload] failed_post thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:01,451 | INFO     | [job] job monitor thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:01,456 | INFO     | [payload] control thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:01,491 | INFO     | [job] control thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:01,620 | INFO     | [data] copytool_in thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:01,757 | INFO     | [data] control thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:01,899 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:02,338 | INFO     | [payload] validate_post thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:02,573 | INFO     | [job] validate thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:02,859 | INFO     | [data] copytool_out thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:03,719 | INFO     | [monitor] cgroup control has ended
[2025-10-07 03:03:17] 2025-10-07 01:03:05,406 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:10,411 | INFO     | job.realtimelogging is not enabled
[2025-10-07 03:03:17] 2025-10-07 01:03:11,416 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 03:03:17] 2025-10-07 01:03:12,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058443520)>']
[2025-10-07 03:03:17] 2025-10-07 01:03:13,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 03:03:17] 2025-10-07 01:03:13,276 | INFO     | [monitor] control thread has ended
[2025-10-07 03:03:17] 2025-10-07 01:03:17,525 | INFO     | all workflow threads have been joined
[2025-10-07 03:03:17] 2025-10-07 01:03:17,525 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 03:03:17] 2025-10-07 01:03:17,525 | INFO     | traces error code: 0
[2025-10-07 03:03:17] 2025-10-07 01:03:17,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 03:03:17] 2025-10-07 01:03:17,576 [wrapper] ==== pilot stdout END ====
[2025-10-07 03:03:17] 2025-10-07 01:03:17,577 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 03:03:17] 2025-10-07 01:03:17,579 [wrapper] pilotpid: 23592
[2025-10-07 03:03:17] 2025-10-07 01:03:17,580 [wrapper] Pilot exit status: 0
[2025-10-07 03:03:17] 2025-10-07 01:03:17,584 [wrapper] pandaids: 6832973434
[2025-10-07 03:03:17] 2025-10-07 01:03:17,607 [wrapper] cleanup supervisor_pilot 22364 23593
[2025-10-07 03:03:17] 2025-10-07 01:03:17,608 [wrapper] Test setup, not cleaning
[2025-10-07 03:03:17] 2025-10-07 01:03:17,609 [wrapper] apfmon messages muted
[2025-10-07 03:03:17] 2025-10-07 01:03:17,610 [wrapper] ==== wrapper stdout END ====
[2025-10-07 03:03:17] 2025-10-07 01:03:17,612 [wrapper] ==== wrapper stderr END ====
[2025-10-07 03:03:17]  *** Error codes and diagnostics ***
[2025-10-07 03:03:17]     "exeErrorCode": 0,
[2025-10-07 03:03:17]     "exeErrorDiag": "",
[2025-10-07 03:03:17]     "pilotErrorCode": 0,
[2025-10-07 03:03:17]     "pilotErrorDiag": "",
[2025-10-07 03:03:17]  *** Listing of results directory ***
[2025-10-07 03:03:17] total 398140
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user    552446 Oct  6 22:44 pilot3.tar.gz
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user      5112 Oct  6 22:57 queuedata.json
[2025-10-07 03:03:17] -rwx------ 1 mf493845 unix-user     36292 Oct  6 22:57 runpilot2-wrapper.sh
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user       100 Oct  7 01:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 03:03:17] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct  7 01:23 run_atlas
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user       105 Oct  7 01:23 job.xml
[2025-10-07 03:03:17] -rw-r--r-- 2 mf493845 unix-user 215769450 Oct  7 02:18 EVNT.46376901._004429.pool.root.1
[2025-10-07 03:03:17] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  7 02:18 start_atlas.sh
[2025-10-07 03:03:17] drwxrwx--x 2 mf493845 unix-user       100 Oct  7 02:18 shared
[2025-10-07 03:03:17] -rw-r--r-- 2 mf493845 unix-user    565604 Oct  7 02:18 input.tar.gz
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user      6388 Oct  7 02:18 init_data.xml
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user         0 Oct  7 02:18 boinc_setup_complete
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user      8192 Oct  7 02:18 boinc_mmap_file
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user         0 Oct  7 02:18 boinc_lockfile
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user      2521 Oct  7 02:18 pandaJob.out
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user    974984 Oct  7 02:18 agis_schedconf.cvmfs.json
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user   1560401 Oct  7 02:18 agis_ddmendpoints.agis.ALL.json
[2025-10-07 03:03:17] drwx------ 4 mf493845 unix-user       400 Oct  7 02:18 pilot3
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user 186605048 Oct  7 03:02 HITS.46376905._119379.pool.root.1
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user        95 Oct  7 03:02 pilot_heartbeat.json
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user      1015 Oct  7 03:02 memory_monitor_summary.json
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user    303842 Oct  7 03:02 log.46376905._119379.job.log.tgz.1
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user      7766 Oct  7 03:02 heartbeat.json
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user      4638 Oct  7 03:03 pilotlog.txt
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user    423241 Oct  7 03:03 log.46376905._119379.job.log.1
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user       357 Oct  7 03:03 output.list
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user       620 Oct  7 03:03 runtime_log
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user    747520 Oct  7 03:03 result.tar.gz
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user      9076 Oct  7 03:03 runtime_log.err
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user       637 Oct  7 03:03 JD5KDmhR7P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhkUNDmUynXCo.diag
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user     21841 Oct  7 03:03 stderr.txt
[2025-10-07 03:03:17] HITS file was successfully produced:
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user 186605048 Oct  7 03:02 shared/HITS.pool.root.1
[2025-10-07 03:03:17]  *** Contents of shared directory: ***
[2025-10-07 03:03:17] total 394252
[2025-10-07 03:03:17] -rw-r--r-- 2 mf493845 unix-user 215769450 Oct  7 02:18 ATLAS.root_0
[2025-10-07 03:03:17] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  7 02:18 start_atlas.sh
[2025-10-07 03:03:17] -rw-r--r-- 2 mf493845 unix-user    565604 Oct  7 02:18 input.tar.gz
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user 186605048 Oct  7 03:02 HITS.pool.root.1
[2025-10-07 03:03:17] -rw------- 1 mf493845 unix-user    747520 Oct  7 03:03 result.tar.gz
03:03:19 (18946): run_atlas exited; CPU time 19220.745413
03:03:19 (18946): called boinc_finish(0)

</stderr_txt>
]]>

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