Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
02:10:39 (8568): wrapper (7.7.26015): starting
02:10:39 (8568): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 02:10:39] Arguments: --nthreads 8
[2025-10-07 02:10:39] Threads: 8
[2025-10-07 02:10:39] Checking for CVMFS
[2025-10-07 02:10:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 02:10:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 02:10:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 02:10:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 02:10:39] 2.11.0.0 15421 26627 65312 151416 1 188 3750489 4096000 4576 130560 0 4727693 99.710 2116133 309 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-07 02:10:39] CVMFS is ok
[2025-10-07 02:10:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 02:10:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 02:10:39] Further information can be found at the LHC@home message board.
[2025-10-07 02:10:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 02:10:39] Checking for apptainer binary...
[2025-10-07 02:10:39] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-07 02:10:39] apptainer is not installed, using version from CVMFS
[2025-10-07 02:10:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 02:10:40] WARNING: Environment variable TMPDIR already has value [/tmp/job_10281299/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node179
[2025-10-07 02:10:40] apptainer works
[2025-10-07 02:10:40] Set ATHENA_PROC_NUMBER=8
[2025-10-07 02:10:40] Set ATHENA_CORE_NUMBER=8
[2025-10-07 02:10:40] Starting ATLAS job with PandaID=6832973349
[2025-10-07 02:10:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10281299/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 02:51:54]  *** The last 200 lines of the pilot log: ***
[2025-10-07 02:51:54]  scope=mc23_13p6TeV
[2025-10-07 02:51:54]  status=None
[2025-10-07 02:51:54]  status_code=0
[2025-10-07 02:51:54]  storage_token=
[2025-10-07 02:51:54]  surl=/tmp/job_10281299/atlas/pilot/slots/0/PanDA_Pilot-6832973349/log.46376905._119294.job.log.tgz.1
[2025-10-07 02:51:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/9d/log.46376905._119294.job.log.tgz.1
[2025-10-07 02:51:54]  workdir=None
[2025-10-07 02:51:54] ]
[2025-10-07 02:51:54] 2025-10-07 00:50:56,224 | INFO     | transferring file log.46376905._119294.job.log.tgz.1 from /tmp/job_10281299/atlas/pilot/slots/0/PanDA_Pilot-6832973349/log.46376905._119294.job.log.tgz.1 to /tmp/j
[2025-10-07 02:51:54] 2025-10-07 00:50:56,224 | INFO     | executing command: /usr/bin/env mv /tmp/job_10281299/atlas/pilot/slots/0/PanDA_Pilot-6832973349/log.46376905._119294.job.log.tgz.1 /tmp/job_10281299/atlas/pilot/sl
[2025-10-07 02:51:54] 2025-10-07 00:50:56,233 | INFO     | adding to output.list: log.46376905._119294.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/9d/log.46376905._119294.job.log.tg
[2025-10-07 02:51:54] 2025-10-07 00:50:56,233 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 02:51:54] 2025-10-07 00:50:56,233 | INFO     | summary of transferred files:
[2025-10-07 02:51:54] 2025-10-07 00:50:56,233 | INFO     |  -- lfn=log.46376905._119294.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 02:51:54] 2025-10-07 00:50:56,233 | INFO     | stage-out finished correctly
[2025-10-07 02:51:54] 2025-10-07 00:50:56,317 | INFO     | monitor loop #180: job 0:6832973349 is in state 'finished'
[2025-10-07 02:51:54] 2025-10-07 00:50:56,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 02:51:54] 2025-10-07 00:50:56,818 | INFO     | time since job start (2412s) is within the limit (172800.0s)
[2025-10-07 02:51:54] 2025-10-07 00:50:58,230 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 02:51:54] 2025-10-07 00:50:58,820 | INFO     | monitor loop #181: job 0:6832973349 is in state 'finished'
[2025-10-07 02:51:54] 2025-10-07 00:50:58,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 02:51:54] 2025-10-07 00:50:58,823 | INFO     | time since job start (2414s) is within the limit (172800.0s)
[2025-10-07 02:51:54] 2025-10-07 00:51:00,478 | INFO     | job 6832973349 has state=finished
[2025-10-07 02:51:54] 2025-10-07 00:51:00,478 | INFO     | preparing for final server update for job 6832973349 in state='finished'
[2025-10-07 02:51:54] 2025-10-07 00:51:00,478 | INFO     | this job has now completed (state=finished)
[2025-10-07 02:51:54] 2025-10-07 00:51:00,478 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 02:51:54] 2025-10-07 00:51:00,479 | INFO     | log transfer has been attempted: DONE
[2025-10-07 02:51:54] 2025-10-07 00:51:00,479 | INFO     | job 6832973349 has finished - writing final server update
[2025-10-07 02:51:54] 2025-10-07 00:51:00,479 | INFO     | total number of processed events: 400 (read)
[2025-10-07 02:51:54] 2025-10-07 00:51:00,479 | INFO     | executing command: lscpu
[2025-10-07 02:51:54] 2025-10-07 00:51:00,510 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 02:51:54] 2025-10-07 00:51:00,829 | INFO     | time since job start (2416s) is within the limit (172800.0s)
[2025-10-07 02:51:54] 2025-10-07 00:51:01,322 | INFO     | monitor loop #182: job 0:6832973349 is in state 'finished'
[2025-10-07 02:51:54] 2025-10-07 00:51:01,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 02:51:54] 2025-10-07 00:51:01,999 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 02:51:54] 2025-10-07 00:51:02,003 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2364.847984375
[2025-10-07 02:51:54] 2025-10-07 00:51:02,009 | INFO     | using path: /tmp/job_10281299/atlas/pilot/slots/0/PanDA_Pilot-6832973349/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 02:51:54] 2025-10-07 00:51:02,009 | INFO     | extracted standard info from prmon json
[2025-10-07 02:51:54] 2025-10-07 00:51:02,009 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 02:51:54] 2025-10-07 00:51:02,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 02:51:54] 2025-10-07 00:51:02,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 02:51:54] 2025-10-07 00:51:02,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 02:51:54] 2025-10-07 00:51:02,010 | INFO     | fitting pss+swap vs Time
[2025-10-07 02:51:54] 2025-10-07 00:51:02,010 | INFO     | sum of square deviations: 11133232.0
[2025-10-07 02:51:54] 2025-10-07 00:51:02,010 | INFO     | sum of deviations: 175417456.0
[2025-10-07 02:51:54] 2025-10-07 00:51:02,010 | INFO     | mean x: 1759797143.0
[2025-10-07 02:51:54] 2025-10-07 00:51:02,010 | INFO     | mean y: 2496667.727272727
[2025-10-07 02:51:54] 2025-10-07 00:51:02,010 | INFO     | -- intersect: -27725223180.482864
[2025-10-07 02:51:54] 2025-10-07 00:51:02,010 | INFO     | intersect: -27725223180.482864
[2025-10-07 02:51:54] 2025-10-07 00:51:02,010 | INFO     | chi2: 0.0007487931340248808
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | -- intersect: -27725223180.482864
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | current memory leak: 15.76 B/s (using 33 data points, chi2=0.00)
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | could have reported an average CPU frequency of 2822 MHz (5 samples)
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | ..............................
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | . Timing measurements:
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | . get job = 0 s
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | . initial setup = 1 s
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | . payload setup = 2 s
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | . stage-in = 0 s
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | . payload execution = 2392 s
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | . stage-out = 0 s
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | . log creation = 0 s
[2025-10-07 02:51:54] 2025-10-07 00:51:02,011 | INFO     | ..............................
[2025-10-07 02:51:54] 2025-10-07 00:51:02,083 | INFO     | 
[2025-10-07 02:51:54] 2025-10-07 00:51:02,083 | INFO     | job summary report
[2025-10-07 02:51:54] 2025-10-07 00:51:02,083 | INFO     | --------------------------------------------------
[2025-10-07 02:51:54] 2025-10-07 00:51:02,083 | INFO     | PanDA job id: 6832973349
[2025-10-07 02:51:54] 2025-10-07 00:51:02,083 | INFO     | task id: 46376905
[2025-10-07 02:51:54] 2025-10-07 00:51:02,083 | INFO     | errors: (none)
[2025-10-07 02:51:54] 2025-10-07 00:51:02,083 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 02:51:54] 2025-10-07 00:51:02,083 | INFO     | pilot state: finished 
[2025-10-07 02:51:54] 2025-10-07 00:51:02,083 | INFO     | transexitcode: 0
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | exeerrorcode: 0
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | exeerrordiag: 
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | exitcode: 0
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | exitmsg: OK
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | cpuconsumptiontime: 17601 s
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | nevents: 400
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | neventsw: 0
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | pid: 19274
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | pgrp: 19274
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | corecount: 8
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | event service: False
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | sizes: {0: 2348946, 2: 2349208, 11: 2349236, 2398: 2374494, 2399: 2383522, 2401: 2383578, 2404: 2383932}
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | --------------------------------------------------
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | 
[2025-10-07 02:51:54] 2025-10-07 00:51:02,084 | INFO     | executing command: ls -lF /tmp/job_10281299/atlas/pilot/slots/0
[2025-10-07 02:51:54] 2025-10-07 00:51:02,092 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | job 6832973349 has completed (purged errors)
[2025-10-07 02:51:54] 2025-10-07 00:51:02,093 | INFO     | overall cleanup function is called
[2025-10-07 02:51:54] 2025-10-07 00:51:03,099 | INFO     | --- collectZombieJob: --- 10, [19274]
[2025-10-07 02:51:54] 2025-10-07 00:51:03,099 | INFO     | zombie collector waiting for pid 19274
[2025-10-07 02:51:54] 2025-10-07 00:51:03,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 02:51:54] 2025-10-07 00:51:03,100 | INFO     | collected zombie processes
[2025-10-07 02:51:54] 2025-10-07 00:51:03,100 | INFO     | will attempt to kill all subprocesses of pid=19274
[2025-10-07 02:51:54] 2025-10-07 00:51:03,194 | INFO     | process IDs to be killed: [19274] (in reverse order)
[2025-10-07 02:51:54] 2025-10-07 00:51:03,225 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 02:51:54] 2025-10-07 00:51:03,225 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 02:51:54] 2025-10-07 00:51:03,228 | INFO     | did not find any defunct processes belonging to 19274
[2025-10-07 02:51:54] 2025-10-07 00:51:03,231 | INFO     | did not find any defunct processes belonging to 19274
[2025-10-07 02:51:54] 2025-10-07 00:51:03,231 | INFO     | ready for new job
[2025-10-07 02:51:54] 2025-10-07 00:51:03,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 02:51:54] 2025-10-07 00:51:03,232 | INFO     | ***************************************
[2025-10-07 02:51:54] 2025-10-07 00:51:03,232 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 02:51:54] 2025-10-07 00:51:03,232 | INFO     | ***************************************
[2025-10-07 02:51:54] 2025-10-07 00:51:03,232 | INFO     | 
[2025-10-07 02:51:54] 2025-10-07 00:51:03,245 | INFO     | architecture information:
[2025-10-07 02:51:54] 2025-10-07 00:51:03,245 | INFO     | executing command: cat /etc/os-release
[2025-10-07 02:51:54] 2025-10-07 00:51:03,251 | INFO     | cat /etc/os-release:
[2025-10-07 02:51:54] NAME="CentOS Linux"
[2025-10-07 02:51:54] VERSION="7 (Core)"
[2025-10-07 02:51:54] ID="centos"
[2025-10-07 02:51:54] ID_LIKE="rhel fedora"
[2025-10-07 02:51:54] VERSION_ID="7"
[2025-10-07 02:51:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 02:51:54] ANSI_COLOR="0;31"
[2025-10-07 02:51:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 02:51:54] HOME_URL="https://www.centos.org/"
[2025-10-07 02:51:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 02:51:54] 
[2025-10-07 02:51:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 02:51:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 02:51:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 02:51:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 02:51:54] 
[2025-10-07 02:51:54] 2025-10-07 00:51:03,251 | INFO     | ***************************************
[2025-10-07 02:51:54] 2025-10-07 00:51:03,754 | INFO     | executing command: df -mP /tmp/job_10281299/atlas/pilot/slots/0
[2025-10-07 02:51:54] 2025-10-07 00:51:03,760 | INFO     | sufficient remaining disk space (225495220224 B)
[2025-10-07 02:51:54] 2025-10-07 00:51:03,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 02:51:54] 2025-10-07 00:51:03,760 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 02:51:54] 2025-10-07 00:51:03,760 | INFO     | update_server=False
[2025-10-07 02:51:54] 2025-10-07 00:51:03,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 02:51:54] 2025-10-07 00:51:03,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 02:51:54] 2025-10-07 00:51:03,824 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 02:51:54] 2025-10-07 00:51:03,825 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 02:51:54] 2025-10-07 00:51:03,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 02:51:54] 2025-10-07 00:51:03,825 | INFO     | will abort loop
[2025-10-07 02:51:54] 2025-10-07 00:51:03,907 | INFO     | all data control threads have been joined
[2025-10-07 02:51:54] 2025-10-07 00:51:04,251 | INFO     | all payload control threads have been joined
[2025-10-07 02:51:54] 2025-10-07 00:51:04,281 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 02:51:54] 2025-10-07 00:51:04,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 02:51:54] 2025-10-07 00:51:04,298 | INFO     | all job control threads have been joined
[2025-10-07 02:51:54] 2025-10-07 00:51:04,765 | INFO     | [job] retrieve thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:04,766 | INFO     | [job] queue monitor thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:04,794 | INFO     | [data] copytool_in thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:04,830 | INFO     | [job] job monitor thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:04,912 | INFO     | [data] control thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:05,183 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:05,256 | INFO     | [payload] control thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:05,303 | INFO     | [job] control thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:05,835 | INFO     | [payload] validate_post thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:06,120 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:06,133 | INFO     | [job] validate thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:06,162 | INFO     | [payload] failed_post thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:06,193 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:06,302 | INFO     | [data] copytool_out thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:08,287 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:13,858 | INFO     | job.realtimelogging is not enabled
[2025-10-07 02:51:54] 2025-10-07 00:51:14,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 02:51:54] 2025-10-07 00:51:34,012 | INFO     | PID=12590 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 02:51:54] 2025-10-07 00:51:34,013 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 02:51:54] 2025-10-07 00:51:34,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 02:51:54] 2025-10-07 00:51:34,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 02:51:54] 2025-10-07 00:51:47,954 | INFO     | [monitor] cgroup control has ended
[2025-10-07 02:51:54] 2025-10-07 00:51:49,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456060544768)>']
[2025-10-07 02:51:54] 2025-10-07 00:51:50,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 02:51:54] 2025-10-07 00:51:50,093 | INFO     | [monitor] control thread has ended
[2025-10-07 02:51:54] 2025-10-07 00:51:54,165 | INFO     | all workflow threads have been joined
[2025-10-07 02:51:54] 2025-10-07 00:51:54,165 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 02:51:54] 2025-10-07 00:51:54,165 | INFO     | traces error code: 0
[2025-10-07 02:51:54] 2025-10-07 00:51:54,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 02:51:54] 2025-10-07 00:51:54,220 [wrapper] ==== pilot stdout END ====
[2025-10-07 02:51:54] 2025-10-07 00:51:54,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 02:51:54] 2025-10-07 00:51:54,222 [wrapper] pilotpid: 12590
[2025-10-07 02:51:54] 2025-10-07 00:51:54,223 [wrapper] Pilot exit status: 0
[2025-10-07 02:51:54] 2025-10-07 00:51:54,226 [wrapper] pandaids: 6832973349
[2025-10-07 02:51:54] 2025-10-07 00:51:54,249 [wrapper] cleanup supervisor_pilot  8215 12591
[2025-10-07 02:51:54] 2025-10-07 00:51:54,250 [wrapper] Test setup, not cleaning
[2025-10-07 02:51:54] 2025-10-07 00:51:54,251 [wrapper] apfmon messages muted
[2025-10-07 02:51:54] 2025-10-07 00:51:54,252 [wrapper] ==== wrapper stdout END ====
[2025-10-07 02:51:54] 2025-10-07 00:51:54,253 [wrapper] ==== wrapper stderr END ====
[2025-10-07 02:51:54]  *** Error codes and diagnostics ***
[2025-10-07 02:51:54]     "exeErrorCode": 0,
[2025-10-07 02:51:54]     "exeErrorDiag": "",
[2025-10-07 02:51:54]     "pilotErrorCode": 0,
[2025-10-07 02:51:54]     "pilotErrorDiag": "",
[2025-10-07 02:51:54]  *** Listing of results directory ***
[2025-10-07 02:51:54] total 386192
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user    552446 Oct  6 22:44 pilot3.tar.gz
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user      5112 Oct  6 22:55 queuedata.json
[2025-10-07 02:51:54] -rwx------ 1 mf493845 unix-user     36292 Oct  6 22:55 runpilot2-wrapper.sh
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user       100 Oct  7 01:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 02:51:54] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct  7 01:15 run_atlas
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user       105 Oct  7 01:15 job.xml
[2025-10-07 02:51:54] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  7 02:10 start_atlas.sh
[2025-10-07 02:51:54] drwxrwx--x 2 mf493845 unix-user       100 Oct  7 02:10 shared
[2025-10-07 02:51:54] -rw-r--r-- 2 mf493845 unix-user    565603 Oct  7 02:10 input.tar.gz
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user      6388 Oct  7 02:10 init_data.xml
[2025-10-07 02:51:54] -rw-r--r-- 2 mf493845 unix-user 214683750 Oct  7 02:10 EVNT.46376901._004426.pool.root.1
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user         0 Oct  7 02:10 boinc_setup_complete
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user      8192 Oct  7 02:10 boinc_mmap_file
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user         0 Oct  7 02:10 boinc_lockfile
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user      2521 Oct  7 02:10 pandaJob.out
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user    975012 Oct  7 02:10 agis_schedconf.cvmfs.json
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user   1560401 Oct  7 02:10 agis_ddmendpoints.agis.ALL.json
[2025-10-07 02:51:54] drwx------ 4 mf493845 unix-user       400 Oct  7 02:10 pilot3
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user 175544856 Oct  7 02:50 HITS.46376905._119294.pool.root.1
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user      1015 Oct  7 02:50 memory_monitor_summary.json
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user    290402 Oct  7 02:50 log.46376905._119294.job.log.tgz.1
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user      7766 Oct  7 02:51 heartbeat.json
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user        95 Oct  7 02:51 pilot_heartbeat.json
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user      5018 Oct  7 02:51 pilotlog.txt
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user    392568 Oct  7 02:51 log.46376905._119294.job.log.1
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user       357 Oct  7 02:51 output.list
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user       620 Oct  7 02:51 runtime_log
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user    706560 Oct  7 02:51 result.tar.gz
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user      9076 Oct  7 02:51 runtime_log.err
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user       641 Oct  7 02:51 QZbLDmmP7P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1jUNDmwNMQfm.diag
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user     22387 Oct  7 02:51 stderr.txt
[2025-10-07 02:51:54] HITS file was successfully produced:
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user 175544856 Oct  7 02:50 shared/HITS.pool.root.1
[2025-10-07 02:51:54]  *** Contents of shared directory: ***
[2025-10-07 02:51:54] total 382352
[2025-10-07 02:51:54] -rw-r--r-- 2 mf493845 unix-user     15120 Oct  7 02:10 start_atlas.sh
[2025-10-07 02:51:54] -rw-r--r-- 2 mf493845 unix-user    565603 Oct  7 02:10 input.tar.gz
[2025-10-07 02:51:54] -rw-r--r-- 2 mf493845 unix-user 214683750 Oct  7 02:10 ATLAS.root_0
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user 175544856 Oct  7 02:50 HITS.pool.root.1
[2025-10-07 02:51:54] -rw------- 1 mf493845 unix-user    706560 Oct  7 02:51 result.tar.gz
02:51:55 (8568): run_atlas exited; CPU time 17632.903739
02:51:55 (8568): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN