Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:08:28 (1416218): wrapper (7.7.26015): starting
15:08:28 (1416218): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 15:08:28] Arguments: --nthreads 12
[2025-10-06 15:08:28] Threads: 12
[2025-10-06 15:08:28] Checking for CVMFS
[2025-10-06 15:08:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 15:08:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 15:08:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 15:08:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 15:08:31] 2.11.5.0 2789 23395 227692 151412 3 627 38762212 45568000 25005 130560 0 232851421 99.860 98925320 28302 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 15:08:31] CVMFS is ok
[2025-10-06 15:08:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 15:08:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 15:08:31] Further information can be found at the LHC@home message board.
[2025-10-06 15:08:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 15:08:31] Checking for apptainer binary...
[2025-10-06 15:08:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 15:08:31] Running /usr/bin/apptainer --version
[2025-10-06 15:08:31] apptainer version 1.4.1-1.el9
[2025-10-06 15:08:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 15:08:32] wns0082.triumf.lcg
[2025-10-06 15:08:32] apptainer works
[2025-10-06 15:08:32] Set ATHENA_PROC_NUMBER=12
[2025-10-06 15:08:32] Set ATHENA_CORE_NUMBER=12
[2025-10-06 15:08:32] Starting ATLAS job with PandaID=6832972192
[2025-10-06 15:08:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 15:14:26]  *** The last 200 lines of the pilot log: ***
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | WARNING  | wrong length of table data, x=[1759788666.0], y=[17558.0] (must be same and length>=4)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | INFO     | could have reported an average CPU frequency of 2735 MHz (4 samples)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | INFO     | ..............................
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . Timing measurements:
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . get job = 0 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . initial setup = 4 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . payload setup = 25 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . stage-in = 0 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . payload execution = 53 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . stage-out = 1 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . log creation = 0 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | ..............................
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832972192/pilotlog.txt
[2025-10-06 15:14:26] 2025-10-06 22:13:51,254 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 15:14:26] - Log from pilotlog.txt -
[2025-10-06 15:14:26] 2025-10-06 22:13:51,161 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832972192/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,162 | INFO     | extracted standard info from prmon json
[2025-10-06 15:14:26] 2025-10-06 22:13:51,162 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 15:14:26] 2025-10-06 22:13:51,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | WARNING  | wrong length of table data, x=[1759788666.0], y=[17558.0] (must be same and length>=4)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | INFO     | could have reported an average CPU frequency of 2735 MHz (4 samples)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | INFO     | ..............................
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . Timing measurements:
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . get job = 0 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . initial setup = 4 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . payload setup = 25 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . stage-in = 0 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . payload execution = 53 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . stage-out = 1 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . log creation = 0 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | ..............................
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832972192/pilotlog.txt
[2025-10-06 15:14:26] 2025-10-06 22:13:51,254 | WARNING  | 
[2025-10-06 15:14:26] [begin log extracts]
[2025-10-06 15:14:26] - Log from pilotlog.txt -
[2025-10-06 15:14:26] 2025-10-06 22:13:51,161 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832972192/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,162 | INFO     | extracted standard info from prmon json
[2025-10-06 15:14:26] 2025-10-06 22:13:51,162 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 15:14:26] 2025-10-06 22:13:51,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | WARNING  | wrong length of table data, x=[1759788666.0], y=[17558.0] (must be same and length>=4)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | INFO     | could have reported an average CPU frequency of 2735 MHz (4 samples)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,163 | INFO     | ..............................
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . Timing measurements:
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . get job = 0 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . initial setup = 4 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . payload setup = 25 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . stage-in = 0 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . payload execution = 53 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . stage-out = 1 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | . log creation = 0 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | ..............................
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 15:14:26] 2025-10-06 22:13:51,164 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832972192/pilotlog.txt
[2025-10-06 15:14:26] [end log extracts]
[2025-10-06 15:14:26] 2025-10-06 22:13:51,254 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,255 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | 
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | job summary report
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | --------------------------------------------------
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | PanDA job id: 6832972192
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | task id: 46376905
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 15:11:22,489 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | pilot state: failed 
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | transexitcode: 65
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | exeerrorcode: 65
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | exitcode: 65
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 15:14:26] 2025-10-06 22:13:51,981 | INFO     | cpuconsumptiontime: 18 s
[2025-10-06 15:14:26] 2025-10-06 22:13:51,982 | INFO     | nevents: 0
[2025-10-06 15:14:26] 2025-10-06 22:13:51,982 | INFO     | neventsw: 0
[2025-10-06 15:14:26] 2025-10-06 22:13:51,982 | INFO     | pid: 1427509
[2025-10-06 15:14:26] 2025-10-06 22:13:51,982 | INFO     | pgrp: 1427509
[2025-10-06 15:14:26] 2025-10-06 22:13:51,982 | INFO     | corecount: 12
[2025-10-06 15:14:26] 2025-10-06 22:13:51,982 | INFO     | event service: False
[2025-10-06 15:14:26] 2025-10-06 22:13:51,982 | INFO     | sizes: {0: 2348815, 1: 2348843, 12: 2348843, 23: 2348871, 26: 2349161, 34: 2349189, 82: 2372603, 84: 2376895, 86: 2376923, 224: 2377089}
[2025-10-06 15:14:26] 2025-10-06 22:13:51,982 | INFO     | --------------------------------------------------
[2025-10-06 15:14:26] 2025-10-06 22:13:51,982 | INFO     | 
[2025-10-06 15:14:26] 2025-10-06 22:13:51,982 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 15:14:26] 2025-10-06 22:13:52,050 | INFO     | time since job start (277s) is within the limit (172800.0s)
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | job 6832972192 has completed (purged errors)
[2025-10-06 15:14:26] 2025-10-06 22:13:52,123 | INFO     | overall cleanup function is called
[2025-10-06 15:14:26] 2025-10-06 22:13:53,130 | INFO     | --- collectZombieJob: --- 10, [1427509]
[2025-10-06 15:14:26] 2025-10-06 22:13:53,130 | INFO     | zombie collector waiting for pid 1427509
[2025-10-06 15:14:26] 2025-10-06 22:13:53,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 15:14:26] 2025-10-06 22:13:53,130 | INFO     | collected zombie processes
[2025-10-06 15:14:26] 2025-10-06 22:13:53,130 | INFO     | will attempt to kill all subprocesses of pid=1427509
[2025-10-06 15:14:26] 2025-10-06 22:13:53,754 | INFO     | process IDs to be killed: [1427509] (in reverse order)
[2025-10-06 15:14:26] 2025-10-06 22:13:54,429 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 15:14:26] 2025-10-06 22:13:54,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 15:14:26] 2025-10-06 22:13:54,446 | INFO     | did not find any defunct processes belonging to 1427509
[2025-10-06 15:14:26] 2025-10-06 22:13:54,455 | INFO     | did not find any defunct processes belonging to 1427509
[2025-10-06 15:14:26] 2025-10-06 22:13:54,456 | INFO     | ready for new job
[2025-10-06 15:14:26] 2025-10-06 22:13:54,456 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 15:14:26] 2025-10-06 22:13:54,457 | INFO     | ***************************************
[2025-10-06 15:14:26] 2025-10-06 22:13:54,457 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 15:14:26] 2025-10-06 22:13:54,457 | INFO     | ***************************************
[2025-10-06 15:14:26] 2025-10-06 22:13:54,457 | INFO     | 
[2025-10-06 15:14:26] 2025-10-06 22:13:54,459 | INFO     | architecture information:
[2025-10-06 15:14:26] 2025-10-06 22:13:54,459 | INFO     | executing command: cat /etc/os-release
[2025-10-06 15:14:26] 2025-10-06 22:13:54,473 | INFO     | cat /etc/os-release:
[2025-10-06 15:14:26] NAME="CentOS Linux"
[2025-10-06 15:14:26] VERSION="7 (Core)"
[2025-10-06 15:14:26] ID="centos"
[2025-10-06 15:14:26] ID_LIKE="rhel fedora"
[2025-10-06 15:14:26] VERSION_ID="7"
[2025-10-06 15:14:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 15:14:26] ANSI_COLOR="0;31"
[2025-10-06 15:14:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 15:14:26] HOME_URL="https://www.centos.org/"
[2025-10-06 15:14:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 15:14:26] 
[2025-10-06 15:14:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 15:14:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 15:14:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 15:14:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 15:14:26] 
[2025-10-06 15:14:26] 2025-10-06 22:13:54,473 | INFO     | ***************************************
[2025-10-06 15:14:26] 2025-10-06 22:13:54,988 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 15:14:26] 2025-10-06 22:13:55,022 | INFO     | sufficient remaining disk space (1980220047360 B)
[2025-10-06 15:14:26] 2025-10-06 22:13:55,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 15:14:26] 2025-10-06 22:13:55,022 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 15:14:26] 2025-10-06 22:13:55,022 | INFO     | update_server=False
[2025-10-06 15:14:26] 2025-10-06 22:13:55,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 15:14:26] 2025-10-06 22:13:55,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 15:14:26] 2025-10-06 22:13:55,120 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 15:14:26] 2025-10-06 22:13:55,191 | INFO     | all job control threads have been joined
[2025-10-06 15:14:26] 2025-10-06 22:13:55,424 | INFO     | all payload control threads have been joined
[2025-10-06 15:14:26] 2025-10-06 22:13:55,826 | INFO     | all data control threads have been joined
[2025-10-06 15:14:26] 2025-10-06 22:13:56,005 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 15:14:26] 2025-10-06 22:13:56,005 | INFO     | aborting loop
[2025-10-06 15:14:26] 2025-10-06 22:13:56,029 | INFO     | [job] retrieve thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:56,105 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:56,126 | INFO     | [job] validate thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:56,197 | INFO     | [job] control thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:56,359 | INFO     | [payload] failed_post thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:56,429 | INFO     | [payload] control thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:56,442 | INFO     | [data] copytool_in thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:56,442 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:56,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 15:14:26] 2025-10-06 22:13:56,832 | INFO     | [data] control thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:56,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:56,958 | INFO     | [payload] validate_post thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:57,011 | INFO     | [job] job monitor thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:57,127 | INFO     | [data] copytool_out thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:57,263 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:57,668 | INFO     | [job] queue monitor thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:13:59,106 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 15:14:26] 2025-10-06 22:14:15,462 | INFO     | [monitor] cgroup control has ended
[2025-10-06 15:14:26] 2025-10-06 22:14:15,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321679648576)>', '<ExcThread(monitor, started 140320389977856)>']
[2025-10-06 15:14:26] 2025-10-06 22:14:20,747 | INFO     | all workflow threads have been joined
[2025-10-06 15:14:26] 2025-10-06 22:14:20,747 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 15:14:26] 2025-10-06 22:14:20,747 | INFO     | traces error code: 0
[2025-10-06 15:14:26] 2025-10-06 22:14:20,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 15:14:26] 2025-10-06 22:14:25,696 | INFO     | PID=1420023 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 15:14:26] 2025-10-06 22:14:25,697 | INFO     | .. there are 41 such processes running
[2025-10-06 15:14:26] 2025-10-06 22:14:25,697 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 15:14:26] 2025-10-06 22:14:25,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 15:14:26] 2025-10-06 22:14:25,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 15:14:26] 2025-10-06 22:14:25,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 15:14:26] 2025-10-06 22:14:25,698 | CRITICAL | thread 'MainThread' is not alive
[2025-10-06 15:14:26] 2025-10-06 22:14:25,698 | INFO     | [monitor] control thread has ended
[2025-10-06 15:14:26] 2025-10-06 22:14:25,823 [wrapper] ==== pilot stdout END ====
[2025-10-06 15:14:26] 2025-10-06 22:14:25,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 15:14:26] 2025-10-06 22:14:25,826 [wrapper] pilotpid: 1420023
[2025-10-06 15:14:26] 2025-10-06 22:14:25,828 [wrapper] Pilot exit status: 0
[2025-10-06 15:14:26] 2025-10-06 22:14:25,854 [wrapper] pandaids: 6832972192
[2025-10-06 15:14:26] 2025-10-06 22:14:25,917 [wrapper] cleanup supervisor_pilot 1420029 1420024
[2025-10-06 15:14:26] 2025-10-06 22:14:25,926 [wrapper] Test setup, not cleaning
[2025-10-06 15:14:26] 2025-10-06 22:14:25,935 [wrapper] apfmon messages muted
[2025-10-06 15:14:26] 2025-10-06 22:14:25,940 [wrapper] ==== wrapper stdout END ====
[2025-10-06 15:14:26] 2025-10-06 22:14:25,945 [wrapper] ==== wrapper stderr END ====
[2025-10-06 15:14:26]  *** Error codes and diagnostics ***
[2025-10-06 15:14:26]     "exeErrorCode": 65,
[2025-10-06 15:14:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 15:14:26]     "pilotErrorCode": 1305,
[2025-10-06 15:14:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 15:14:26]  *** Listing of results directory ***
[2025-10-06 15:14:26] total 211900
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc    552446 Oct  6 12:47 pilot3.tar.gz
[2025-10-06 15:14:26] -rwx------. 1 boinc boinc     36292 Oct  6 13:26 runpilot2-wrapper.sh
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc      5112 Oct  6 13:26 queuedata.json
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc       100 Oct  6 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 15:14:26] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 15:08 run_atlas
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc       105 Oct  6 15:08 job.xml
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc      6594 Oct  6 15:08 init_data.xml
[2025-10-06 15:14:26] -rw-r--r--. 2 boinc boinc 212870504 Oct  6 15:08 EVNT.46376901._004395.pool.root.1
[2025-10-06 15:14:26] -rw-r--r--. 2 boinc boinc     15120 Oct  6 15:08 start_atlas.sh
[2025-10-06 15:14:26] drwxrwx--x. 2 boinc boinc      4096 Oct  6 15:08 shared
[2025-10-06 15:14:26] -rw-r--r--. 2 boinc boinc    565594 Oct  6 15:08 input.tar.gz
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc         0 Oct  6 15:08 boinc_lockfile
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc      2520 Oct  6 15:08 pandaJob.out
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc    975020 Oct  6 15:09 agis_schedconf.cvmfs.json
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc   1560401 Oct  6 15:09 agis_ddmendpoints.agis.ALL.json
[2025-10-06 15:14:26] drwx------. 4 boinc boinc      4096 Oct  6 15:09 pilot3
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc       961 Oct  6 15:11 memory_monitor_summary.json
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc     22352 Oct  6 15:11 log.46376905._118512.job.log.tgz.1
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc      8420 Oct  6 15:13 heartbeat.json
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc       523 Oct  6 15:14 boinc_task_state.xml
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc      8192 Oct  6 15:14 boinc_mmap_file
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc        22 Oct  6 15:14 wrapper_checkpoint.txt
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc        95 Oct  6 15:14 pilot_heartbeat.json
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc       893 Oct  6 15:14 pilotlog.txt
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc     93959 Oct  6 15:14 log.46376905._118512.job.log.1
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc       188 Oct  6 15:14 output.list
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc       620 Oct  6 15:14 runtime_log
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc    133120 Oct  6 15:14 result.tar.gz
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc      8528 Oct  6 15:14 runtime_log.err
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc       644 Oct  6 15:14 ptQODmnx6P8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9wJMDmoCbpgm.diag
[2025-10-06 15:14:26] -rw-r--r--. 1 boinc boinc     21829 Oct  6 15:14 stderr.txt
[2025-10-06 15:14:26] No HITS result produced
[2025-10-06 15:14:26]  *** Contents of shared directory: ***
[2025-10-06 15:14:26] total 208592
[2025-10-06 15:14:26] -rw-r--r--. 2 boinc boinc 212870504 Oct  6 15:08 ATLAS.root_0
[2025-10-06 15:14:26] -rw-r--r--. 2 boinc boinc     15120 Oct  6 15:08 start_atlas.sh
[2025-10-06 15:14:26] -rw-r--r--. 2 boinc boinc    565594 Oct  6 15:08 input.tar.gz
[2025-10-06 15:14:26] -rw-------. 1 boinc boinc    133120 Oct  6 15:14 result.tar.gz
15:14:27 (1416218): run_atlas exited; CPU time 30.277661
15:14:27 (1416218): called boinc_finish(0)

</stderr_txt>
]]>

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