Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
04:09:09 (929012): wrapper (7.7.26015): starting
04:09:09 (929012): wrapper: running run_atlas (--nthreads 2)
[2025-10-07 04:09:10] Arguments: --nthreads 2
[2025-10-07 04:09:10] Threads: 2
[2025-10-07 04:09:10] Checking for CVMFS
[2025-10-07 04:09:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 04:09:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 04:09:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 04:09:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 04:09:10] 2.11.0.0 3910605 9260 62496 151419 0 56 4932822 6144001 0 130560 0 20264021 99.997 303826 488 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 04:09:10] CVMFS is ok
[2025-10-07 04:09:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 04:09:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 04:09:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 04:09:10] Further information can be found at the LHC@home message board.
[2025-10-07 04:09:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 04:09:10] Checking for apptainer binary...
[2025-10-07 04:09:10] apptainer is not installed, using version from CVMFS
[2025-10-07 04:09:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 04:09:10] mordor
[2025-10-07 04:09:10] apptainer works
[2025-10-07 04:09:10] Set ATHENA_PROC_NUMBER=2
[2025-10-07 04:09:10] Set ATHENA_CORE_NUMBER=2
[2025-10-07 04:09:10] Starting ATLAS job with PandaID=6832861776
[2025-10-07 04:09:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 09:06:55]  *** The last 200 lines of the pilot log: ***
[2025-10-07 09:06:55] 2025-10-07 07:06:03,958 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 09:06:55] 2025-10-07 07:06:03,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 09:06:55] 2025-10-07 07:06:03,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 09:06:55] 2025-10-07 07:06:03,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 09:06:55] 2025-10-07 07:06:03,962 | INFO     | fitting pss+swap vs Time
[2025-10-07 09:06:55] 2025-10-07 07:06:03,962 | INFO     | sum of square deviations: 7720081493.0
[2025-10-07 09:06:55] 2025-10-07 07:06:03,964 | INFO     | sum of deviations: 9566470332.499998
[2025-10-07 09:06:55] 2025-10-07 07:06:03,964 | INFO     | mean x: 1759811855.5
[2025-10-07 09:06:55] 2025-10-07 07:06:03,964 | INFO     | mean y: 2260278.0102739725
[2025-10-07 09:06:55] 2025-10-07 07:06:03,964 | INFO     | -- intersect: -2178440524.3954296
[2025-10-07 09:06:55] 2025-10-07 07:06:03,964 | INFO     | intersect: -2178440524.3954296
[2025-10-07 09:06:55] 2025-10-07 07:06:03,964 | INFO     | chi2: 1.2082645207083273
[2025-10-07 09:06:55] 2025-10-07 07:06:03,965 | INFO     | sum of square deviations: 7330250928.0
[2025-10-07 09:06:55] 2025-10-07 07:06:03,966 | INFO     | sum of deviations: 8732291276.0
[2025-10-07 09:06:55] 2025-10-07 07:06:03,966 | INFO     | mean x: 1759811703.0
[2025-10-07 09:06:55] 2025-10-07 07:06:03,966 | INFO     | mean y: 2259954.968641115
[2025-10-07 09:06:55] 2025-10-07 07:06:03,967 | INFO     | -- intersect: -2094146911.9245796
[2025-10-07 09:06:55] 2025-10-07 07:06:03,967 | INFO     | intersect: -2094146911.9245796
[2025-10-07 09:06:55] 2025-10-07 07:06:03,967 | INFO     | chi2: 1.2071562295823834
[2025-10-07 09:06:55] 2025-10-07 07:06:03,967 | INFO     | current chi2=1.2071562295823834 (change=0.09172586854525745 %)
[2025-10-07 09:06:55] 2025-10-07 07:06:03,967 | INFO     | right removable region: 286
[2025-10-07 09:06:55] 2025-10-07 07:06:03,967 | INFO     | sum of square deviations: 7330250928.0
[2025-10-07 09:06:55] 2025-10-07 07:06:03,969 | INFO     | sum of deviations: -7666824588.999996
[2025-10-07 09:06:55] 2025-10-07 07:06:03,969 | INFO     | mean x: 1759812008.0
[2025-10-07 09:06:55] 2025-10-07 07:06:03,969 | INFO     | mean y: 2266877.606271777
[2025-10-07 09:06:55] 2025-10-07 07:06:03,969 | INFO     | -- intersect: 1842881899.8580527
[2025-10-07 09:06:55] 2025-10-07 07:06:03,969 | INFO     | intersect: 1842881899.8580527
[2025-10-07 09:06:55] 2025-10-07 07:06:03,969 | INFO     | chi2: 0.1156727812823068
[2025-10-07 09:06:55] 2025-10-07 07:06:03,970 | INFO     | current chi2=0.1156727812823068 (change=90.4265349764226 %)
[2025-10-07 09:06:55] 2025-10-07 07:06:03,970 | INFO     | sum of square deviations: 6953769450.5
[2025-10-07 09:06:55] 2025-10-07 07:06:03,971 | INFO     | sum of deviations: 5170681713.999999
[2025-10-07 09:06:55] 2025-10-07 07:06:03,972 | INFO     | mean x: 1759812160.5
[2025-10-07 09:06:55] 2025-10-07 07:06:03,972 | INFO     | mean y: 2261697.418439716
[2025-10-07 09:06:55] 2025-10-07 07:06:03,972 | INFO     | -- intersect: -1306298878.7044718
[2025-10-07 09:06:55] 2025-10-07 07:06:03,972 | INFO     | intersect: -1306298878.7044718
[2025-10-07 09:06:55] 2025-10-07 07:06:03,972 | INFO     | chi2: 0.0044683535433758725
[2025-10-07 09:06:55] 2025-10-07 07:06:03,972 | INFO     | current chi2=0.0044683535433758725 (change=96.13707434554499 %)
[2025-10-07 09:06:55] 2025-10-07 07:06:03,972 | INFO     | sum of square deviations: 6590404498.0
[2025-10-07 09:06:55] 2025-10-07 07:06:03,974 | INFO     | sum of deviations: 4009986218.999997
[2025-10-07 09:06:55] 2025-10-07 07:06:03,974 | INFO     | mean x: 1759812313.0
[2025-10-07 09:06:55] 2025-10-07 07:06:03,974 | INFO     | mean y: 2262183.476534296
[2025-10-07 09:06:55] 2025-10-07 07:06:03,974 | INFO     | -- intersect: -1068510198.5977459
[2025-10-07 09:06:55] 2025-10-07 07:06:03,974 | INFO     | intersect: -1068510198.5977459
[2025-10-07 09:06:55] 2025-10-07 07:06:03,974 | INFO     | chi2: 0.003952919861484721
[2025-10-07 09:06:55] 2025-10-07 07:06:03,975 | INFO     | current chi2=0.003952919861484721 (change=11.535203669263321 %)
[2025-10-07 09:06:55] 2025-10-07 07:06:03,975 | INFO     | left removable region: 30
[2025-10-07 09:06:55] 2025-10-07 07:06:03,975 | INFO     | sum of square deviations: 5202255680.0
[2025-10-07 09:06:55] 2025-10-07 07:06:03,976 | INFO     | sum of deviations: 1678827939.5
[2025-10-07 09:06:55] 2025-10-07 07:06:03,976 | INFO     | mean x: 1759812587.5
[2025-10-07 09:06:55] 2025-10-07 07:06:03,976 | INFO     | mean y: 2262612.20703125
[2025-10-07 09:06:55] 2025-10-07 07:06:03,976 | INFO     | -- intersect: -565649217.182098
[2025-10-07 09:06:55] 2025-10-07 07:06:03,976 | INFO     | intersect: -565649217.182098
[2025-10-07 09:06:55] 2025-10-07 07:06:03,977 | INFO     | chi2: 0.002723258003465525
[2025-10-07 09:06:55] 2025-10-07 07:06:03,977 | INFO     | -- intersect: -565649217.182098
[2025-10-07 09:06:55] 2025-10-07 07:06:03,977 | INFO     | current memory leak: 0.32 B/s (using 256 data points, chi2=0.00)
[2025-10-07 09:06:55] 2025-10-07 07:06:03,977 | INFO     | could have reported an average CPU frequency of 2979 MHz (13 samples)
[2025-10-07 09:06:55] 2025-10-07 07:06:03,977 | INFO     | ..............................
[2025-10-07 09:06:55] 2025-10-07 07:06:03,977 | INFO     | . Timing measurements:
[2025-10-07 09:06:55] 2025-10-07 07:06:03,977 | INFO     | . get job = 0 s
[2025-10-07 09:06:55] 2025-10-07 07:06:03,978 | INFO     | . initial setup = 2 s
[2025-10-07 09:06:55] 2025-10-07 07:06:03,978 | INFO     | . payload setup = 3 s
[2025-10-07 09:06:55] 2025-10-07 07:06:03,978 | INFO     | . stage-in = 0 s
[2025-10-07 09:06:55] 2025-10-07 07:06:03,978 | INFO     | . payload execution = 17776 s
[2025-10-07 09:06:55] 2025-10-07 07:06:03,978 | INFO     | . stage-out = 2 s
[2025-10-07 09:06:55] 2025-10-07 07:06:03,978 | INFO     | . log creation = 0 s
[2025-10-07 09:06:55] 2025-10-07 07:06:03,978 | INFO     | ..............................
[2025-10-07 09:06:55] 2025-10-07 07:06:04,041 | INFO     | 
[2025-10-07 09:06:55] 2025-10-07 07:06:04,041 | INFO     | job summary report
[2025-10-07 09:06:55] 2025-10-07 07:06:04,041 | INFO     | --------------------------------------------------
[2025-10-07 09:06:55] 2025-10-07 07:06:04,041 | INFO     | PanDA job id: 6832861776
[2025-10-07 09:06:55] 2025-10-07 07:06:04,041 | INFO     | task id: 46376905
[2025-10-07 09:06:55] 2025-10-07 07:06:04,041 | INFO     | errors: (none)
[2025-10-07 09:06:55] 2025-10-07 07:06:04,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 09:06:55] 2025-10-07 07:06:04,041 | INFO     | pilot state: finished 
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | transexitcode: 0
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | exeerrorcode: 0
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | exeerrordiag: 
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | exitcode: 0
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | exitmsg: OK
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | cpuconsumptiontime: 34752 s
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | nevents: 400
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | neventsw: 0
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | pid: 938991
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | pgrp: 938991
[2025-10-07 09:06:55] 2025-10-07 07:06:04,042 | INFO     | corecount: 2
[2025-10-07 09:06:55] 2025-10-07 07:06:04,043 | INFO     | event service: False
[2025-10-07 09:06:55] 2025-10-07 07:06:04,043 | INFO     | sizes: {0: 2348826, 3: 2349088, 11: 2349116, 17783: 2381444, 17786: 2390512, 17792: 2390650}
[2025-10-07 09:06:55] 2025-10-07 07:06:04,043 | INFO     | --------------------------------------------------
[2025-10-07 09:06:55] 2025-10-07 07:06:04,043 | INFO     | 
[2025-10-07 09:06:55] 2025-10-07 07:06:04,043 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-07 09:06:55] 2025-10-07 07:06:04,056 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,057 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,057 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,057 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,057 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,058 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,058 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,058 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,059 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 09:06:55] 2025-10-07 07:06:04,059 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,059 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 09:06:55] 2025-10-07 07:06:04,059 | INFO     | job 6832861776 has completed (purged errors)
[2025-10-07 09:06:55] 2025-10-07 07:06:04,059 | INFO     | overall cleanup function is called
[2025-10-07 09:06:55] 2025-10-07 07:06:05,063 | INFO     | --- collectZombieJob: --- 10, [938991]
[2025-10-07 09:06:55] 2025-10-07 07:06:05,063 | INFO     | zombie collector waiting for pid 938991
[2025-10-07 09:06:55] 2025-10-07 07:06:05,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 09:06:55] 2025-10-07 07:06:05,063 | INFO     | collected zombie processes
[2025-10-07 09:06:55] 2025-10-07 07:06:05,063 | INFO     | will attempt to kill all subprocesses of pid=938991
[2025-10-07 09:06:55] 2025-10-07 07:06:05,123 | INFO     | process IDs to be killed: [938991] (in reverse order)
[2025-10-07 09:06:55] 2025-10-07 07:06:05,148 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 09:06:55] 2025-10-07 07:06:05,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 09:06:55] 2025-10-07 07:06:05,150 | INFO     | did not find any defunct processes belonging to 938991
[2025-10-07 09:06:55] 2025-10-07 07:06:05,151 | INFO     | did not find any defunct processes belonging to 938991
[2025-10-07 09:06:55] 2025-10-07 07:06:05,151 | INFO     | ready for new job
[2025-10-07 09:06:55] 2025-10-07 07:06:05,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 09:06:55] 2025-10-07 07:06:05,152 | INFO     | ***************************************
[2025-10-07 09:06:55] 2025-10-07 07:06:05,152 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 09:06:55] 2025-10-07 07:06:05,152 | INFO     | ***************************************
[2025-10-07 09:06:55] 2025-10-07 07:06:05,152 | INFO     | 
[2025-10-07 09:06:55] 2025-10-07 07:06:05,171 | INFO     | architecture information:
[2025-10-07 09:06:55] 2025-10-07 07:06:05,171 | INFO     | executing command: cat /etc/os-release
[2025-10-07 09:06:55] 2025-10-07 07:06:05,182 | INFO     | cat /etc/os-release:
[2025-10-07 09:06:55] NAME="CentOS Linux"
[2025-10-07 09:06:55] VERSION="7 (Core)"
[2025-10-07 09:06:55] ID="centos"
[2025-10-07 09:06:55] ID_LIKE="rhel fedora"
[2025-10-07 09:06:55] VERSION_ID="7"
[2025-10-07 09:06:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 09:06:55] ANSI_COLOR="0;31"
[2025-10-07 09:06:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 09:06:55] HOME_URL="https://www.centos.org/"
[2025-10-07 09:06:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 09:06:55] 
[2025-10-07 09:06:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 09:06:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 09:06:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 09:06:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 09:06:55] 
[2025-10-07 09:06:55] 2025-10-07 07:06:05,183 | INFO     | ***************************************
[2025-10-07 09:06:55] 2025-10-07 07:06:05,684 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-07 09:06:55] 2025-10-07 07:06:05,695 | INFO     | sufficient remaining disk space (418437398528 B)
[2025-10-07 09:06:55] 2025-10-07 07:06:05,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 09:06:55] 2025-10-07 07:06:05,695 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 09:06:55] 2025-10-07 07:06:05,695 | INFO     | update_server=False
[2025-10-07 09:06:55] 2025-10-07 07:06:05,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 09:06:55] 2025-10-07 07:06:05,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 09:06:55] 2025-10-07 07:06:05,696 | INFO     | aborting loop
[2025-10-07 09:06:55] 2025-10-07 07:06:05,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 09:06:55] 2025-10-07 07:06:06,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 09:06:55] 2025-10-07 07:06:06,165 | INFO     | all payload control threads have been joined
[2025-10-07 09:06:55] 2025-10-07 07:06:06,247 | INFO     | all data control threads have been joined
[2025-10-07 09:06:55] 2025-10-07 07:06:06,701 | INFO     | [job] retrieve thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:06,702 | INFO     | [job] job monitor thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:06,702 | INFO     | [job] queue monitor thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:06,980 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:07,023 | INFO     | [payload] failed_post thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:07,066 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:07,168 | INFO     | [payload] control thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:07,249 | INFO     | [data] control thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:07,286 | INFO     | all job control threads have been joined
[2025-10-07 09:06:55] 2025-10-07 07:06:07,406 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:07,514 | INFO     | [data] copytool_in thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:07,795 | INFO     | [job] validate thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:07,837 | INFO     | [payload] validate_post thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:07,899 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:08,083 | INFO     | [data] copytool_out thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:08,291 | INFO     | [job] control thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:08,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 09:06:55] 2025-10-07 07:06:12,641 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 09:06:55] 2025-10-07 07:06:36,100 | INFO     | PID=932651 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-07 09:06:55] 2025-10-07 07:06:36,101 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 09:06:55] 2025-10-07 07:06:36,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 09:06:55] 2025-10-07 07:06:36,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 09:06:55] 2025-10-07 07:06:48,407 | INFO     | [monitor] cgroup control has ended
[2025-10-07 09:06:55] 2025-10-07 07:06:50,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907320280896)>', '<ExcThread(monitor, started 139906714154752)>']
[2025-10-07 09:06:55] 2025-10-07 07:06:51,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 09:06:55] 2025-10-07 07:06:51,166 | INFO     | [monitor] control thread has ended
[2025-10-07 09:06:55] 2025-10-07 07:06:55,343 | INFO     | all workflow threads have been joined
[2025-10-07 09:06:55] 2025-10-07 07:06:55,343 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 09:06:55] 2025-10-07 07:06:55,343 | INFO     | traces error code: 0
[2025-10-07 09:06:55] 2025-10-07 07:06:55,344 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 09:06:55] 2025-10-07 07:06:55,816 [wrapper] ==== pilot stdout END ====
[2025-10-07 09:06:55] 2025-10-07 07:06:55,818 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 09:06:55] 2025-10-07 07:06:55,820 [wrapper] pilotpid: 932651
[2025-10-07 09:06:55] 2025-10-07 07:06:55,822 [wrapper] Pilot exit status: 0
[2025-10-07 09:06:55] 2025-10-07 07:06:55,829 [wrapper] pandaids: 6832861776
[2025-10-07 09:06:55] 2025-10-07 07:06:55,848 [wrapper] cleanup supervisor_pilot  967336 932652
[2025-10-07 09:06:55] 2025-10-07 07:06:55,850 [wrapper] Test setup, not cleaning
[2025-10-07 09:06:55] 2025-10-07 07:06:55,852 [wrapper] apfmon messages muted
[2025-10-07 09:06:55] 2025-10-07 07:06:55,853 [wrapper] ==== wrapper stdout END ====
[2025-10-07 09:06:55] 2025-10-07 07:06:55,855 [wrapper] ==== wrapper stderr END ====
[2025-10-07 09:06:55]  *** Error codes and diagnostics ***
[2025-10-07 09:06:55]     "exeErrorCode": 0,
[2025-10-07 09:06:55]     "exeErrorDiag": "",
[2025-10-07 09:06:55]     "pilotErrorCode": 0,
[2025-10-07 09:06:55]     "pilotErrorDiag": "",
[2025-10-07 09:06:55]  *** Listing of results directory ***
[2025-10-07 09:06:55] total 391632
[2025-10-07 09:06:55] -rw-r--r-- 1 root root    552446 Oct  6 20:06 pilot3.tar.gz
[2025-10-07 09:06:55] -rw-r--r-- 1 root root      5112 Oct  6 20:14 queuedata.json
[2025-10-07 09:06:55] -rwx------ 1 4871 1028     36292 Oct  6 20:14 runpilot2-wrapper.sh
[2025-10-07 09:06:55] -rw-r--r-- 1 root root       100 Oct  7 04:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 09:06:55] -rwxr-xr-x 1 root root      7986 Oct  7 04:09 run_atlas
[2025-10-07 09:06:55] -rw-r--r-- 1 root root       105 Oct  7 04:09 job.xml
[2025-10-07 09:06:55] -rw-r--r-- 2 root root     15120 Oct  7 04:09 start_atlas.sh
[2025-10-07 09:06:55] drwxrwx--x 2 root root      4096 Oct  7 04:09 shared
[2025-10-07 09:06:55] -rw-r--r-- 2 root root    565605 Oct  7 04:09 input.tar.gz
[2025-10-07 09:06:55] -rw-r--r-- 1 root root      6136 Oct  7 04:09 init_data.xml
[2025-10-07 09:06:55] -rw-r--r-- 2 root root 215547148 Oct  7 04:09 EVNT.46376901._004318.pool.root.1
[2025-10-07 09:06:55] -rw-r--r-- 1 root root         0 Oct  7 04:09 boinc_lockfile
[2025-10-07 09:06:55] -rw-r--r-- 1 root root      2520 Oct  7 04:09 pandaJob.out
[2025-10-07 09:06:55] -rw------- 1 root root    975000 Oct  7 04:09 agis_schedconf.cvmfs.json
[2025-10-07 09:06:55] drwxr-xr-x 4  320  320      4096 Oct  7 04:09 pilot3
[2025-10-07 09:06:55] -rw------- 1 root root 175874758 Oct  7 09:05 HITS.46376905._116380.pool.root.1
[2025-10-07 09:06:55] -rw-r--r-- 1 root root       530 Oct  7 09:05 boinc_task_state.xml
[2025-10-07 09:06:55] -rw------- 1 root root      1033 Oct  7 09:05 memory_monitor_summary.json
[2025-10-07 09:06:55] -rw------- 1 root root   1560401 Oct  7 09:05 agis_ddmendpoints.agis.ALL.json
[2025-10-07 09:06:55] -rw------- 1 root root    410489 Oct  7 09:05 log.46376905._116380.job.log.tgz.1
[2025-10-07 09:06:55] -rw------- 1 root root      7776 Oct  7 09:06 heartbeat.json
[2025-10-07 09:06:55] -rw------- 1 root root        95 Oct  7 09:06 pilot_heartbeat.json
[2025-10-07 09:06:55] -rw-r--r-- 1 root root      8192 Oct  7 09:06 boinc_mmap_file
[2025-10-07 09:06:55] -rw-r--r-- 1 root root        28 Oct  7 09:06 wrapper_checkpoint.txt
[2025-10-07 09:06:55] -rw------- 1 root root      4755 Oct  7 09:06 pilotlog.txt
[2025-10-07 09:06:55] -rw------- 1 root root   2452820 Oct  7 09:06 log.46376905._116380.job.log.1
[2025-10-07 09:06:55] -rw------- 1 root root       357 Oct  7 09:06 output.list
[2025-10-07 09:06:55] -rw-r--r-- 1 root root       620 Oct  7 09:06 runtime_log
[2025-10-07 09:06:55] -rw------- 1 root root   2877440 Oct  7 09:06 result.tar.gz
[2025-10-07 09:06:55] -rw-r--r-- 1 root root      8767 Oct  7 09:06 runtime_log.err
[2025-10-07 09:06:55] -rw------- 1 root root       654 Oct  7 09:06 mFwNDmQu4P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrFUNDmCZEGan.diag
[2025-10-07 09:06:55] -rw-r--r-- 1 root root     20972 Oct  7 09:06 stderr.txt
[2025-10-07 09:06:55] HITS file was successfully produced:
[2025-10-07 09:06:55] -rw------- 1 root root 175874758 Oct  7 09:05 shared/HITS.pool.root.1
[2025-10-07 09:06:55]  *** Contents of shared directory: ***
[2025-10-07 09:06:55] total 385640
[2025-10-07 09:06:55] -rw-r--r-- 2 root root     15120 Oct  7 04:09 start_atlas.sh
[2025-10-07 09:06:55] -rw-r--r-- 2 root root    565605 Oct  7 04:09 input.tar.gz
[2025-10-07 09:06:55] -rw-r--r-- 2 root root 215547148 Oct  7 04:09 ATLAS.root_0
[2025-10-07 09:06:55] -rw------- 1 root root 175874758 Oct  7 09:05 HITS.pool.root.1
[2025-10-07 09:06:55] -rw------- 1 root root   2877440 Oct  7 09:06 result.tar.gz
09:06:57 (929012): run_atlas exited; CPU time 34877.286761
09:06:57 (929012): called boinc_finish(0)

</stderr_txt>
]]>

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