Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:08:12 (2913147): wrapper (7.7.26015): starting
15:08:12 (2913147): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 15:08:12] Arguments: --nthreads 8
[2025-10-06 15:08:12] Threads: 8
[2025-10-06 15:08:12] Checking for CVMFS
[2025-10-06 15:08:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 15:08:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 15:08:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 15:08:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 15:08:12] 2.11.3.0 1855 21860 218288 151412 0 231 42144226 45568001 15118 130560 0 139093710 99.851 59778447 14890 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 15:08:12] CVMFS is ok
[2025-10-06 15:08:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 15:08:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 15:08:12] Further information can be found at the LHC@home message board.
[2025-10-06 15:08:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 15:08:12] Checking for apptainer binary...
[2025-10-06 15:08:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 15:08:12] Running /usr/bin/apptainer --version
[2025-10-06 15:08:12] apptainer version 1.4.1-1.el9
[2025-10-06 15:08:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 15:08:13] wns0009.triumf.lcg
[2025-10-06 15:08:13] apptainer works
[2025-10-06 15:08:13] Set ATHENA_PROC_NUMBER=8
[2025-10-06 15:08:13] Set ATHENA_CORE_NUMBER=8
[2025-10-06 15:08:13] Starting ATLAS job with PandaID=6832972126
[2025-10-06 15:08:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 15:14:02]  *** The last 200 lines of the pilot log: ***
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | ..............................
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | . Timing measurements:
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | . get job = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | . initial setup = 9 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . payload setup = 23 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . stage-in = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . payload execution = 70 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . stage-out = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . log creation = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | ..............................
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832972126/pilotlog.txt
[2025-10-06 15:14:02] 2025-10-06 22:13:26,765 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 15:14:02] - Log from pilotlog.txt -
[2025-10-06 15:14:02] 2025-10-06 22:13:26,749 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832972126/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,749 | INFO     | extracted standard info from prmon json
[2025-10-06 15:14:02] 2025-10-06 22:13:26,749 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 15:14:02] 2025-10-06 22:13:26,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 15:14:02] 2025-10-06 22:13:26,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 15:14:02] 2025-10-06 22:13:26,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | WARNING  | wrong length of table data, x=[1759788620.0], y=[1675.0] (must be same and length>=4)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | ..............................
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | . Timing measurements:
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | . get job = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | . initial setup = 9 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . payload setup = 23 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . stage-in = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . payload execution = 70 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . stage-out = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . log creation = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | ..............................
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832972126/pilotlog.txt
[2025-10-06 15:14:02] 2025-10-06 22:13:26,765 | WARNING  | 
[2025-10-06 15:14:02] [begin log extracts]
[2025-10-06 15:14:02] - Log from pilotlog.txt -
[2025-10-06 15:14:02] 2025-10-06 22:13:26,749 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832972126/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,749 | INFO     | extracted standard info from prmon json
[2025-10-06 15:14:02] 2025-10-06 22:13:26,749 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 15:14:02] 2025-10-06 22:13:26,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 15:14:02] 2025-10-06 22:13:26,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 15:14:02] 2025-10-06 22:13:26,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | WARNING  | wrong length of table data, x=[1759788620.0], y=[1675.0] (must be same and length>=4)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | ..............................
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | . Timing measurements:
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | . get job = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,751 | INFO     | . initial setup = 9 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . payload setup = 23 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . stage-in = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . payload execution = 70 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . stage-out = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | . log creation = 0 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | ..............................
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 15:14:02] 2025-10-06 22:13:26,752 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832972126/pilotlog.txt
[2025-10-06 15:14:02] [end log extracts]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,765 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,766 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 15:14:02] 2025-10-06 22:13:26,838 | INFO     | 
[2025-10-06 15:14:02] 2025-10-06 22:13:26,838 | INFO     | job summary report
[2025-10-06 15:14:02] 2025-10-06 22:13:26,838 | INFO     | --------------------------------------------------
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | PanDA job id: 6832972126
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | task id: 46376905
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 15:11:05,178 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | pilot state: failed 
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | transexitcode: 65
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | exeerrorcode: 65
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | exitcode: 65
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | cpuconsumptiontime: 18 s
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | nevents: 0
[2025-10-06 15:14:02] 2025-10-06 22:13:26,839 | INFO     | neventsw: 0
[2025-10-06 15:14:02] 2025-10-06 22:13:26,840 | INFO     | pid: 2923571
[2025-10-06 15:14:02] 2025-10-06 22:13:26,840 | INFO     | pgrp: 2923571
[2025-10-06 15:14:02] 2025-10-06 22:13:26,840 | INFO     | corecount: 8
[2025-10-06 15:14:02] 2025-10-06 22:13:26,840 | INFO     | event service: False
[2025-10-06 15:14:02] 2025-10-06 22:13:26,840 | INFO     | sizes: {0: 2348646, 1: 2348845, 12: 2348845, 18: 2349135, 23: 2349163, 99: 2372586, 100: 2376878, 103: 2376906, 232: 2377072}
[2025-10-06 15:14:02] 2025-10-06 22:13:26,840 | INFO     | --------------------------------------------------
[2025-10-06 15:14:02] 2025-10-06 22:13:26,840 | INFO     | 
[2025-10-06 15:14:02] 2025-10-06 22:13:26,840 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 15:14:02] 2025-10-06 22:13:26,908 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,909 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,909 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,909 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,909 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,909 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,909 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 15:14:02] 2025-10-06 22:13:26,910 | INFO     | job 6832972126 has completed (purged errors)
[2025-10-06 15:14:02] 2025-10-06 22:13:26,911 | INFO     | overall cleanup function is called
[2025-10-06 15:14:02] 2025-10-06 22:13:27,917 | INFO     | --- collectZombieJob: --- 10, [2923571]
[2025-10-06 15:14:02] 2025-10-06 22:13:27,917 | INFO     | zombie collector waiting for pid 2923571
[2025-10-06 15:14:02] 2025-10-06 22:13:27,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 15:14:02] 2025-10-06 22:13:27,917 | INFO     | collected zombie processes
[2025-10-06 15:14:02] 2025-10-06 22:13:27,918 | INFO     | will attempt to kill all subprocesses of pid=2923571
[2025-10-06 15:14:02] 2025-10-06 22:13:28,154 | INFO     | PID=2916893 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 15:14:02] 2025-10-06 22:13:28,154 | INFO     | .. there are 26 such processes running
[2025-10-06 15:14:02] 2025-10-06 22:13:28,461 | INFO     | process IDs to be killed: [2923571] (in reverse order)
[2025-10-06 15:14:02] 2025-10-06 22:13:28,785 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 15:14:02] 2025-10-06 22:13:28,786 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 15:14:02] 2025-10-06 22:13:28,793 | INFO     | did not find any defunct processes belonging to 2923571
[2025-10-06 15:14:02] 2025-10-06 22:13:28,800 | INFO     | did not find any defunct processes belonging to 2923571
[2025-10-06 15:14:02] 2025-10-06 22:13:28,800 | INFO     | ready for new job
[2025-10-06 15:14:02] 2025-10-06 22:13:28,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 15:14:02] 2025-10-06 22:13:28,801 | INFO     | ***************************************
[2025-10-06 15:14:02] 2025-10-06 22:13:28,802 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 15:14:02] 2025-10-06 22:13:28,802 | INFO     | ***************************************
[2025-10-06 15:14:02] 2025-10-06 22:13:28,802 | INFO     | 
[2025-10-06 15:14:02] 2025-10-06 22:13:28,803 | INFO     | architecture information:
[2025-10-06 15:14:02] 2025-10-06 22:13:28,804 | INFO     | executing command: cat /etc/os-release
[2025-10-06 15:14:02] 2025-10-06 22:13:28,820 | INFO     | cat /etc/os-release:
[2025-10-06 15:14:02] NAME="CentOS Linux"
[2025-10-06 15:14:02] VERSION="7 (Core)"
[2025-10-06 15:14:02] ID="centos"
[2025-10-06 15:14:02] ID_LIKE="rhel fedora"
[2025-10-06 15:14:02] VERSION_ID="7"
[2025-10-06 15:14:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 15:14:02] ANSI_COLOR="0;31"
[2025-10-06 15:14:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 15:14:02] HOME_URL="https://www.centos.org/"
[2025-10-06 15:14:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 15:14:02] 
[2025-10-06 15:14:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 15:14:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 15:14:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 15:14:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 15:14:02] 
[2025-10-06 15:14:02] 2025-10-06 22:13:28,820 | INFO     | ***************************************
[2025-10-06 15:14:02] 2025-10-06 22:13:29,327 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 15:14:02] 2025-10-06 22:13:29,593 | INFO     | sufficient remaining disk space (1391365980160 B)
[2025-10-06 15:14:02] 2025-10-06 22:13:29,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 15:14:02] 2025-10-06 22:13:29,593 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 15:14:02] 2025-10-06 22:13:29,593 | INFO     | update_server=False
[2025-10-06 15:14:02] 2025-10-06 22:13:29,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 15:14:02] 2025-10-06 22:13:29,741 | INFO     | all data control threads have been joined
[2025-10-06 15:14:02] 2025-10-06 22:13:29,949 | INFO     | all payload control threads have been joined
[2025-10-06 15:14:02] 2025-10-06 22:13:30,022 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-06 15:14:02] 2025-10-06 22:13:30,022 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-06 15:14:02] 2025-10-06 22:13:30,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 15:14:02] 2025-10-06 22:13:30,023 | INFO     | will abort loop
[2025-10-06 15:14:02] 2025-10-06 22:13:30,566 | INFO     | all job control threads have been joined
[2025-10-06 15:14:02] 2025-10-06 22:13:30,598 | INFO     | [job] retrieve thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:30,743 | INFO     | [payload] validate_post thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:30,746 | INFO     | [data] control thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:30,939 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 15:14:02] 2025-10-06 22:13:30,959 | INFO     | [payload] control thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:30,990 | INFO     | [data] copytool_in thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:31,029 | INFO     | [job] job monitor thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:31,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 15:14:02] 2025-10-06 22:13:31,139 | INFO     | [job] validate thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:31,403 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:31,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:31,572 | INFO     | [job] control thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:31,689 | INFO     | [payload] failed_post thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:31,804 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:31,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 15:14:02] 2025-10-06 22:13:32,011 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:32,869 | INFO     | [job] queue monitor thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:33,039 | INFO     | [data] copytool_out thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:34,949 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 15:14:02] 2025-10-06 22:13:51,287 | INFO     | [monitor] cgroup control has ended
[2025-10-06 15:14:02] 2025-10-06 22:13:51,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766012876608)>', '<ExcThread(monitor, started 139765441603328)>']
[2025-10-06 15:14:02] 2025-10-06 22:13:56,596 | INFO     | all workflow threads have been joined
[2025-10-06 15:14:02] 2025-10-06 22:13:56,596 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 15:14:02] 2025-10-06 22:13:56,597 | INFO     | traces error code: 0
[2025-10-06 15:14:02] 2025-10-06 22:13:56,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 15:14:02] 2025-10-06 22:14:00,532 | INFO     | PID=2916893 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 15:14:02] 2025-10-06 22:14:00,532 | INFO     | .. there are 26 such processes running
[2025-10-06 15:14:02] 2025-10-06 22:14:00,533 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 15:14:02] 2025-10-06 22:14:00,533 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 15:14:02] 2025-10-06 22:14:00,533 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 15:14:02] 2025-10-06 22:14:00,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 15:14:02] 2025-10-06 22:14:00,534 | INFO     | [monitor] control thread has ended
[2025-10-06 15:14:02] 2025-10-06 22:14:00,791 [wrapper] ==== pilot stdout END ====
[2025-10-06 15:14:02] 2025-10-06 22:14:00,793 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 15:14:02] 2025-10-06 22:14:00,795 [wrapper] pilotpid: 2916893
[2025-10-06 15:14:02] 2025-10-06 22:14:00,852 [wrapper] Pilot exit status: 0
[2025-10-06 15:14:02] 2025-10-06 22:14:01,006 [wrapper] pandaids: 6832972126
[2025-10-06 15:14:02] 2025-10-06 22:14:01,470 [wrapper] cleanup supervisor_pilot 2916899 2916894
[2025-10-06 15:14:02] 2025-10-06 22:14:01,508 [wrapper] Test setup, not cleaning
[2025-10-06 15:14:02] 2025-10-06 22:14:01,569 [wrapper] apfmon messages muted
[2025-10-06 15:14:02] 2025-10-06 22:14:01,606 [wrapper] ==== wrapper stdout END ====
[2025-10-06 15:14:02] 2025-10-06 22:14:01,650 [wrapper] ==== wrapper stderr END ====
[2025-10-06 15:14:02]  *** Error codes and diagnostics ***
[2025-10-06 15:14:02]     "exeErrorCode": 65,
[2025-10-06 15:14:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 15:14:02]     "pilotErrorCode": 1305,
[2025-10-06 15:14:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 15:14:02]  *** Listing of results directory ***
[2025-10-06 15:14:02] total 212668
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc    552446 Oct  6 12:47 pilot3.tar.gz
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc      5112 Oct  6 13:23 queuedata.json
[2025-10-06 15:14:02] -rwx------. 1 boinc boinc     36292 Oct  6 13:23 runpilot2-wrapper.sh
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc       100 Oct  6 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 15:14:02] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 15:08 run_atlas
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc       105 Oct  6 15:08 job.xml
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc      6443 Oct  6 15:08 init_data.xml
[2025-10-06 15:14:02] -rw-r--r--. 2 boinc boinc 213656218 Oct  6 15:08 EVNT.46376901._004392.pool.root.1
[2025-10-06 15:14:02] -rw-r--r--. 2 boinc boinc     15120 Oct  6 15:08 start_atlas.sh
[2025-10-06 15:14:02] drwxrwx--x. 2 boinc boinc      4096 Oct  6 15:08 shared
[2025-10-06 15:14:02] -rw-r--r--. 2 boinc boinc    565601 Oct  6 15:08 input.tar.gz
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc         0 Oct  6 15:08 boinc_lockfile
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc      2521 Oct  6 15:08 pandaJob.out
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc    975020 Oct  6 15:08 agis_schedconf.cvmfs.json
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc   1560401 Oct  6 15:08 agis_ddmendpoints.agis.ALL.json
[2025-10-06 15:14:02] drwx------. 4 boinc boinc      4096 Oct  6 15:08 pilot3
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc       524 Oct  6 15:11 boinc_task_state.xml
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc       965 Oct  6 15:11 memory_monitor_summary.json
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc     22414 Oct  6 15:11 log.46376905._118446.job.log.tgz.1
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc      8389 Oct  6 15:13 heartbeat.json
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc       823 Oct  6 15:14 pilotlog.txt
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc        95 Oct  6 15:14 pilot_heartbeat.json
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc        23 Oct  6 15:14 wrapper_checkpoint.txt
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc     94785 Oct  6 15:14 log.46376905._118446.job.log.1
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc      8192 Oct  6 15:14 boinc_mmap_file
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc       188 Oct  6 15:14 output.list
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc       620 Oct  6 15:14 runtime_log
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc    133120 Oct  6 15:14 result.tar.gz
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc       646 Oct  6 15:14 t9lLDmIv6P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvbUNDm7OmMOm.diag
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc      8526 Oct  6 15:14 runtime_log.err
[2025-10-06 15:14:02] -rw-r--r--. 1 boinc boinc     21903 Oct  6 15:14 stderr.txt
[2025-10-06 15:14:02] No HITS result produced
[2025-10-06 15:14:02]  *** Contents of shared directory: ***
[2025-10-06 15:14:02] total 209356
[2025-10-06 15:14:02] -rw-r--r--. 2 boinc boinc 213656218 Oct  6 15:08 ATLAS.root_0
[2025-10-06 15:14:02] -rw-r--r--. 2 boinc boinc     15120 Oct  6 15:08 start_atlas.sh
[2025-10-06 15:14:02] -rw-r--r--. 2 boinc boinc    565601 Oct  6 15:08 input.tar.gz
[2025-10-06 15:14:02] -rw-------. 1 boinc boinc    133120 Oct  6 15:14 result.tar.gz
15:14:04 (2913147): run_atlas exited; CPU time 29.966846
15:14:04 (2913147): called boinc_finish(0)

</stderr_txt>
]]>

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