Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 22:53:05 (9500): vboxwrapper version 26210
2025-10-09 22:53:05 (9500): BOINC client version: 8.2.4
2025-10-09 22:53:06 (9500): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-09 22:53:06 (9500): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 22:53:06 (9500): Create VM. (boinc_05dad57cc72f9426, slot#0)
2025-10-09 22:53:07 (9500): Setting Memory Size for VM. (4200MB)
2025-10-09 22:53:07 (9500): Setting CPU Count for VM. (2)
2025-10-09 22:53:07 (9500): Setting Chipset Options for VM.
2025-10-09 22:53:07 (9500): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 22:53:08 (9500): Setting Boot Options for VM.
2025-10-09 22:53:08 (9500): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 22:53:09 (9500): Enabling VM Network Access.
2025-10-09 22:53:09 (9500): Disabling USB Support for VM.
2025-10-09 22:53:09 (9500): Disabling COM Port Support for VM.
2025-10-09 22:53:09 (9500): Disabling LPT Port Support for VM.
2025-10-09 22:53:10 (9500): Disabling Audio Support for VM.
2025-10-09 22:53:10 (9500): Disabling Clipboard Support for VM.
2025-10-09 22:53:10 (9500): Disabling Drag and Drop Support for VM.
2025-10-09 22:53:10 (9500): Adding storage controller(s) to VM.
2025-10-09 22:53:11 (9500): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 22:53:13 (9500): Adding VirtualBox Guest Additions to VM.
2025-10-09 22:53:13 (9500): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 22:53:13 (9500): forwarding host port 49323 to guest port 80
2025-10-09 22:53:13 (9500): Enabling remote desktop for VM.
2025-10-09 22:53:14 (9500): Enabling shared directory for VM.
2025-10-09 22:53:15 (9500): Starting VM using VBoxManage interface. (boinc_05dad57cc72f9426, slot#0)
2025-10-09 22:53:21 (9500): Successfully started VM. (PID = '5504')
2025-10-09 22:53:21 (9500): Reporting VM Process ID to BOINC.
2025-10-09 22:53:21 (9500): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-09 22:53:21 (9500): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 22:53:21 (9500): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 22:53:21 (9500): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 22:53:21 (9500): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 22:53:21 (9500): Detected: Web Application Enabled (http://localhost:49323)
2025-10-09 22:53:21 (9500): Detected: Remote Desktop Enabled (localhost:49324)
2025-10-09 22:53:21 (9500): Preference change detected
2025-10-09 22:53:21 (9500): Setting CPU throttle for VM. (100%)
2025-10-09 22:53:21 (9500): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 22:53:23 (9500): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 22:53:23 (9500): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 22:53:27 (9500): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 22:53:27 (9500): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 22:53:27 (9500): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 22:53:34 (9500): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 22:53:34 (9500): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 22:53:51 (9500): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 22:53:51 (9500): Guest Log: 00:00:00.000291 main     Log opened 2025-10-09T22:53:50.213683000Z
2025-10-09 22:53:51 (9500): Guest Log: 00:00:00.000432 main     OS Product: Linux
2025-10-09 22:53:51 (9500): Guest Log: 00:00:00.000480 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 22:53:51 (9500): Guest Log: 00:00:00.000522 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 22:53:51 (9500): Guest Log: 00:00:00.000565 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 22:53:51 (9500): Guest Log: 00:00:00.000567 main     Process ID: 1266
2025-10-09 22:53:51 (9500): Guest Log: 00:00:00.000568 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 22:53:51 (9500): Guest Log: 00:00:00.024097 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 22:53:51 (9500): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 22:53:51 (9500): Guest Log: [INFO] Mounting shared directory
2025-10-09 22:53:52 (9500): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 22:53:55 (9500): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 22:53:55 (9500): Guest Log: [INFO] Detected branch: prod
2025-10-09 22:53:55 (9500): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 22:53:55 (9500): Guest Log: Copying input files
2025-10-09 22:53:57 (9500): Guest Log: Copied input files into RunAtlas.
2025-10-09 22:53:57 (9500): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-10-09 22:54:01 (9500): Guest Log: 00:00:10.030982 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 607 816 000ns (GuestNow=1 760 043 241 636 255 000 ns GuestLast=1 760 050 430 244 071 000 ns fSetTimeLastLoop=true )
2025-10-09 22:54:06 (9500): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 22:54:06 (9500): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 22:54:06 (9500): Guest Log: 2.6.3.0 1543 0 31628 151522 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-10-09 22:54:08 (9500): Guest Log: copied the webapp to /var/www
2025-10-09 22:54:08 (9500): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-09 22:54:08 (9500): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-09 22:54:08 (9500): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 22:54:08 (9500): Guest Log:  *** Starting ATLAS job. (PandaID=6832860691 taskID=46376905) ***
2025-10-10 01:10:25 (9500): Status Report: Elapsed Time: '6000.678001'
2025-10-10 01:10:27 (9500): Status Report: CPU Time: '15292.531250'
2025-10-10 03:35:58 (9500): Status Report: Elapsed Time: '12002.376032'
2025-10-10 03:35:58 (9500): Status Report: CPU Time: '32461.906250'
2025-10-10 06:00:38 (9500): Status Report: Elapsed Time: '18003.310028'
2025-10-10 06:00:38 (9500): Status Report: CPU Time: '49498.500000'
2025-10-10 07:40:42 (9500): Status Report: Elapsed Time: '24003.310028'
2025-10-10 07:40:42 (9500): Status Report: CPU Time: '60800.093750'
2025-10-10 08:54:00 (9500): Guest Log:  *** Job finished ***
2025-10-10 08:54:00 (9500): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:53:40,050 | INFO     | all workflow threads have been joined
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:53:40,050 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:53:40,050 | INFO     | traces error code: 0
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:53:40,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:53:59,885 | INFO     | PID=5911 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:53:59,886 | INFO     | found 0 job(s) in 20 queues
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:53:59,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:53:59,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:53:59,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:53:59,887 | INFO     | [monitor] control thread has ended
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:54:00,022 [wrapper] ==== pilot stdout END ====
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:54:00,027 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:54:00,032 [wrapper] pilotpid: 5911
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:54:00,037 [wrapper] Pilot exit status: 0
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:54:00,097 [wrapper] pandaids: 6832860691
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:54:00,136 [wrapper] cleanup supervisor_pilot 15001 5912
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:54:00,142 [wrapper] Test setup, not cleaning
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:54:00,148 [wrapper] apfmon messages muted
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:54:00,154 [wrapper] ==== wrapper stdout END ====
2025-10-10 08:54:00 (9500): Guest Log: 2025-10-10 06:54:00,160 [wrapper] ==== wrapper stderr END ====
2025-10-10 08:54:00 (9500): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 08:54:00 (9500): Guest Log:     "exeErrorCode": 0,
2025-10-10 08:54:00 (9500): Guest Log:     "exeErrorDiag": "",
2025-10-10 08:54:00 (9500): Guest Log:     "pilotErrorCode": 0,
2025-10-10 08:54:00 (9500): Guest Log:     "pilotErrorDiag": "",
2025-10-10 08:54:00 (9500): Guest Log:  *** Listing of results directory ***
2025-10-10 08:54:01 (9500): Guest Log: total 185420
2025-10-10 08:54:01 (9500): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  6 17:15 pilot3.tar.gz
2025-10-10 08:54:01 (9500): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  6 17:17 queuedata.json
2025-10-10 08:54:01 (9500): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  6 17:17 runpilot2-wrapper.sh
2025-10-10 08:54:01 (9500): Guest Log: -rwxr-xr-x. 1 atlas atlas      8394 Oct  9 20:53 init_data.xml
2025-10-10 08:54:01 (9500): Guest Log: -rwxr-xr-x. 1 atlas atlas    565603 Oct  9 20:53 input.tar.gz
2025-10-10 08:54:01 (9500): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 20:53 start_atlas.sh
2025-10-10 08:54:01 (9500): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 20:53 EVNT.46376901._004280.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 08:54:01 (9500): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Oct  9 20:54 pandaJob.out
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas    975454 Oct  9 20:54 agis_schedconf.cvmfs.json
2025-10-10 08:54:01 (9500): Guest Log: drwx------. 4 atlas atlas      4096 Oct  9 20:54 pilot3
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas 175109475 Oct 10 06:52 HITS.46376905._115433.pool.root.1
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas      1026 Oct 10 06:52 memory_monitor_summary.json
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 06:53 agis_ddmendpoints.agis.ALL.json
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas    659820 Oct 10 06:53 log.46376905._115433.job.log.tgz.1
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas      7786 Oct 10 06:53 heartbeat.json
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 06:53 pilot_heartbeat.json
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas       744 Oct 10 06:53 pilotlog.txt
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas   4811480 Oct 10 06:54 log.46376905._115433.job.log.1
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 06:54 output.list
2025-10-10 08:54:01 (9500): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 06:54 runtime_log
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas   5488640 Oct 10 06:54 result.tar.gz
2025-10-10 08:54:01 (9500): Guest Log: -rw-r--r--. 1 atlas atlas      8645 Oct 10 06:54 runtime_log.err
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas       664 Oct 10 06:54 rSjNDmc13P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm65TNDm7dT0An.diag
2025-10-10 08:54:01 (9500): Guest Log: Looking for outputfile HITS.46376905._115433.pool.root.1
2025-10-10 08:54:01 (9500): Guest Log: HITS file was successfully produced
2025-10-10 08:54:01 (9500): Guest Log: -rw-------. 1 atlas atlas 175109475 Oct 10 06:52 /home/atlas/RunAtlas/HITS.46376905._115433.pool.root.1
2025-10-10 08:54:02 (9500): Guest Log: Successfully finished the ATLAS job!
2025-10-10 08:54:02 (9500): Guest Log: Copying the results back to the shared directory!
2025-10-10 08:54:02 (9500): Guest Log:  *** Contents of shared directory: ***
2025-10-10 08:54:02 (9500): Guest Log: total 389280
2025-10-10 08:54:02 (9500): Guest Log: -rwxrwxrwx. 1 root root 217423616 Oct  9 20:53 ATLAS.root_0
2025-10-10 08:54:02 (9500): Guest Log: -rwxrwxrwx. 1 root root 175109475 Oct 10 06:54 HITS.pool.root.1
2025-10-10 08:54:02 (9500): Guest Log: -rwxrwxrwx. 1 root root      8394 Oct  9 20:53 init_data.xml
2025-10-10 08:54:02 (9500): Guest Log: -rwxrwxrwx. 1 root root    565603 Oct  6 21:37 input.tar.gz
2025-10-10 08:54:02 (9500): Guest Log: -rwxrwxrwx. 1 root root   5488640 Oct 10 06:54 result.tar.gz
2025-10-10 08:54:02 (9500): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  6 21:37 start_atlas.sh
2025-10-10 08:54:02 (9500): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 08:54:02 (9500): VM Completion File Detected.
2025-10-10 08:54:02 (9500): Powering off VM.
2025-10-10 08:54:03 (9500): Successfully stopped VM.
2025-10-10 08:54:03 (9500): Deregistering VM. (boinc_05dad57cc72f9426, slot#0)
2025-10-10 08:54:03 (9500): Removing network bandwidth throttle group from VM.
2025-10-10 08:54:03 (9500): Removing VM from VirtualBox.
2025-10-10 08:54:08 (9500): called boinc_finish(0)

</stderr_txt>
]]>

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