Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:19:40 (3084869): wrapper (7.7.26015): starting
23:19:40 (3084869): wrapper: running run_atlas (--nthreads 2)
[2025-10-06 23:19:40] Arguments: --nthreads 2
[2025-10-06 23:19:40] Threads: 2
[2025-10-06 23:19:40] Checking for CVMFS
[2025-10-06 23:19:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 23:19:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 23:19:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 23:19:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 23:19:42] 2.11.0.0 2968439 34 49704 151412 1 180 3705935 4194305 0 130560 0 364707 99.995 4002 852 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-06 23:19:42] CVMFS is ok
[2025-10-06 23:19:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 23:19:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-06 23:19:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-06 23:19:42] Further information can be found at the LHC@home message board.
[2025-10-06 23:19:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 23:19:42] Checking for apptainer binary...
[2025-10-06 23:19:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 23:19:42] Running /usr/bin/apptainer --version
[2025-10-06 23:19:43] apptainer version 1.2.2-1.el8
[2025-10-06 23:19:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 23:19:44] bottom
[2025-10-06 23:19:44] apptainer works
[2025-10-06 23:19:44] Set ATHENA_PROC_NUMBER=2
[2025-10-06 23:19:44] Set ATHENA_CORE_NUMBER=2
[2025-10-06 23:19:44] Starting ATLAS job with PandaID=6832674577
[2025-10-06 23:19:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 23:27:35]  *** The last 200 lines of the pilot log: ***
[2025-10-06 23:27:35] 2025-10-06 21:27:02,311 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-06 23:27:35] 2025-10-06 21:27:02,312 | WARNING  | file does not exist either: /var/lib/boinc/slots/2/PanDA_Pilot-6832674577/memory_monitor_output.txt
[2025-10-06 23:27:35] 2025-10-06 21:27:02,312 | INFO     | memory summary dictionary not yet available
[2025-10-06 23:27:35] 2025-10-06 21:27:02,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 23:27:35] 2025-10-06 21:27:02,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 23:27:35] 2025-10-06 21:27:02,313 | INFO     | could have reported an average CPU frequency of 1882 MHz (4 samples)
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | ..............................
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . Timing measurements:
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . get job = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . initial setup = 4 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . payload setup = 13 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . stage-in = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . payload execution = 189 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . stage-out = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | . log creation = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | ..............................
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6832674577/pilotlog.txt
[2025-10-06 23:27:35] 2025-10-06 21:27:02,334 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 23:27:35] - Log from pilotlog.txt -
[2025-10-06 23:27:35] 2025-10-06 21:27:01,565 | INFO     | time since job start (414s) is within the limit (172800.0s)
[2025-10-06 23:27:35] 2025-10-06 21:27:02,309 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-06 23:27:35] 2025-10-06 21:27:02,311 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-06 23:27:35] 2025-10-06 21:27:02,312 | WARNING  | file does not exist either: /var/lib/boinc/slots/2/PanDA_Pilot-6832674577/memory_monitor_output.txt
[2025-10-06 23:27:35] 2025-10-06 21:27:02,312 | INFO     | memory summary dictionary not yet available
[2025-10-06 23:27:35] 2025-10-06 21:27:02,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 23:27:35] 2025-10-06 21:27:02,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 23:27:35] 2025-10-06 21:27:02,313 | INFO     | could have reported an average CPU frequency of 1882 MHz (4 samples)
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | ..............................
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . Timing measurements:
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . get job = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . initial setup = 4 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . payload setup = 13 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . stage-in = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . payload execution = 189 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . stage-out = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | . log creation = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | ..............................
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6832674577/pilotlog.txt
[2025-10-06 23:27:35] 2025-10-06 21:27:02,334 | WARNING  | 
[2025-10-06 23:27:35] [begin log extracts]
[2025-10-06 23:27:35] - Log from pilotlog.txt -
[2025-10-06 23:27:35] 2025-10-06 21:27:01,565 | INFO     | time since job start (414s) is within the limit (172800.0s)
[2025-10-06 23:27:35] 2025-10-06 21:27:02,309 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-06 23:27:35] 2025-10-06 21:27:02,311 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1997.267
[2025-10-06 23:27:35] 2025-10-06 21:27:02,312 | WARNING  | file does not exist either: /var/lib/boinc/slots/2/PanDA_Pilot-6832674577/memory_monitor_output.txt
[2025-10-06 23:27:35] 2025-10-06 21:27:02,312 | INFO     | memory summary dictionary not yet available
[2025-10-06 23:27:35] 2025-10-06 21:27:02,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 23:27:35] 2025-10-06 21:27:02,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 23:27:35] 2025-10-06 21:27:02,313 | INFO     | could have reported an average CPU frequency of 1882 MHz (4 samples)
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | ..............................
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . Timing measurements:
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . get job = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . initial setup = 4 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . payload setup = 13 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . stage-in = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . payload execution = 189 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,314 | INFO     | . stage-out = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | . log creation = 0 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | ..............................
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 23:27:35] 2025-10-06 21:27:02,315 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6832674577/pilotlog.txt
[2025-10-06 23:27:35] [end log extracts]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,335 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 23:27:35] 2025-10-06 21:27:02,336 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-06 23:27:35] 2025-10-06 21:27:02,537 | INFO     | 
[2025-10-06 23:27:35] 2025-10-06 21:27:02,538 | INFO     | job summary report
[2025-10-06 23:27:35] 2025-10-06 21:27:02,538 | INFO     | --------------------------------------------------
[2025-10-06 23:27:35] 2025-10-06 21:27:02,538 | INFO     | PanDA job id: 6832674577
[2025-10-06 23:27:35] 2025-10-06 21:27:02,538 | INFO     | task id: 46376905
[2025-10-06 23:27:35] 2025-10-06 21:27:02,538 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 23:23:44,184 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 23:27:35] 2025-10-06 21:27:02,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 23:27:35] 2025-10-06 21:27:02,538 | INFO     | pilot state: failed 
[2025-10-06 23:27:35] 2025-10-06 21:27:02,539 | INFO     | transexitcode: 65
[2025-10-06 23:27:35] 2025-10-06 21:27:02,539 | INFO     | exeerrorcode: 65
[2025-10-06 23:27:35] 2025-10-06 21:27:02,539 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-06 23:27:35] 2025-10-06 21:27:02,539 | INFO     | exitcode: 65
[2025-10-06 23:27:35] 2025-10-06 21:27:02,539 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-06 23:27:35] 2025-10-06 21:27:02,539 | INFO     | cpuconsumptiontime: 153 s
[2025-10-06 23:27:35] 2025-10-06 21:27:02,539 | INFO     | nevents: 0
[2025-10-06 23:27:35] 2025-10-06 21:27:02,540 | INFO     | neventsw: 0
[2025-10-06 23:27:35] 2025-10-06 21:27:02,540 | INFO     | pid: 3095002
[2025-10-06 23:27:35] 2025-10-06 21:27:02,540 | INFO     | pgrp: 3095002
[2025-10-06 23:27:35] 2025-10-06 21:27:02,540 | INFO     | corecount: 2
[2025-10-06 23:27:35] 2025-10-06 21:27:02,540 | INFO     | event service: False
[2025-10-06 23:27:35] 2025-10-06 21:27:02,540 | INFO     | sizes: {0: 2348649, 1: 2348848, 7: 2349110, 12: 2349138, 267: 2372568, 269: 2376863, 272: 2377047, 397: 2377241}
[2025-10-06 23:27:35] 2025-10-06 21:27:02,541 | INFO     | --------------------------------------------------
[2025-10-06 23:27:35] 2025-10-06 21:27:02,541 | INFO     | 
[2025-10-06 23:27:35] 2025-10-06 21:27:02,541 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-06 23:27:35] 2025-10-06 21:27:02,568 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,568 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,568 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,568 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,569 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,570 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,570 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 23:27:35] 2025-10-06 21:27:02,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,571 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 23:27:35] 2025-10-06 21:27:02,571 | INFO     | job 6832674577 has completed (purged errors)
[2025-10-06 23:27:35] 2025-10-06 21:27:02,571 | INFO     | overall cleanup function is called
[2025-10-06 23:27:35] 2025-10-06 21:27:03,579 | INFO     | --- collectZombieJob: --- 10, [3095002]
[2025-10-06 23:27:35] 2025-10-06 21:27:03,579 | INFO     | zombie collector waiting for pid 3095002
[2025-10-06 23:27:35] 2025-10-06 21:27:03,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 23:27:35] 2025-10-06 21:27:03,579 | INFO     | collected zombie processes
[2025-10-06 23:27:35] 2025-10-06 21:27:03,579 | INFO     | will attempt to kill all subprocesses of pid=3095002
[2025-10-06 23:27:35] 2025-10-06 21:27:03,653 | INFO     | process IDs to be killed: [3095002] (in reverse order)
[2025-10-06 23:27:35] 2025-10-06 21:27:03,700 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 23:27:35] 2025-10-06 21:27:03,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 23:27:35] 2025-10-06 21:27:03,704 | INFO     | did not find any defunct processes belonging to 3095002
[2025-10-06 23:27:35] 2025-10-06 21:27:03,707 | INFO     | did not find any defunct processes belonging to 3095002
[2025-10-06 23:27:35] 2025-10-06 21:27:03,708 | INFO     | ready for new job
[2025-10-06 23:27:35] 2025-10-06 21:27:03,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 23:27:35] 2025-10-06 21:27:03,710 | INFO     | ***************************************
[2025-10-06 23:27:35] 2025-10-06 21:27:03,710 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 23:27:35] 2025-10-06 21:27:03,710 | INFO     | ***************************************
[2025-10-06 23:27:35] 2025-10-06 21:27:03,710 | INFO     | 
[2025-10-06 23:27:35] 2025-10-06 21:27:03,723 | INFO     | architecture information:
[2025-10-06 23:27:35] 2025-10-06 21:27:03,723 | INFO     | executing command: cat /etc/os-release
[2025-10-06 23:27:35] 2025-10-06 21:27:03,743 | INFO     | cat /etc/os-release:
[2025-10-06 23:27:35] NAME="CentOS Linux"
[2025-10-06 23:27:35] VERSION="7 (Core)"
[2025-10-06 23:27:35] ID="centos"
[2025-10-06 23:27:35] ID_LIKE="rhel fedora"
[2025-10-06 23:27:35] VERSION_ID="7"
[2025-10-06 23:27:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 23:27:35] ANSI_COLOR="0;31"
[2025-10-06 23:27:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 23:27:35] HOME_URL="https://www.centos.org/"
[2025-10-06 23:27:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 23:27:35] 
[2025-10-06 23:27:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 23:27:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 23:27:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 23:27:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 23:27:35] 
[2025-10-06 23:27:35] 2025-10-06 21:27:03,743 | INFO     | ***************************************
[2025-10-06 23:27:35] 2025-10-06 21:27:04,246 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-06 23:27:35] 2025-10-06 21:27:04,266 | INFO     | sufficient remaining disk space (213262532608 B)
[2025-10-06 23:27:35] 2025-10-06 21:27:04,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 23:27:35] 2025-10-06 21:27:04,267 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 23:27:35] 2025-10-06 21:27:04,267 | INFO     | update_server=False
[2025-10-06 23:27:35] 2025-10-06 21:27:04,267 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 23:27:35] 2025-10-06 21:27:04,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 23:27:35] 2025-10-06 21:27:04,409 | INFO     | all job control threads have been joined
[2025-10-06 23:27:35] 2025-10-06 21:27:04,955 | INFO     | all data control threads have been joined
[2025-10-06 23:27:35] 2025-10-06 21:27:05,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 23:27:35] 2025-10-06 21:27:05,026 | INFO     | aborting loop
[2025-10-06 23:27:35] 2025-10-06 21:27:05,038 | INFO     | all payload control threads have been joined
[2025-10-06 23:27:35] 2025-10-06 21:27:05,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 23:27:35] 2025-10-06 21:27:05,273 | INFO     | [job] retrieve thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:05,273 | INFO     | [job] queue monitor thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:05,279 | INFO     | [job] validate thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:05,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 23:27:35] 2025-10-06 21:27:05,415 | INFO     | [job] control thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:05,499 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:05,652 | INFO     | [payload] failed_post thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:05,898 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:05,961 | INFO     | [data] control thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:06,032 | INFO     | [job] job monitor thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:06,043 | INFO     | [payload] control thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:06,048 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:06,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:06,469 | INFO     | [data] copytool_in thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:06,670 | INFO     | [payload] validate_post thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:07,259 | INFO     | [data] copytool_out thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:07,507 | INFO     | [monitor] cgroup control has ended
[2025-10-06 23:27:35] 2025-10-06 21:27:09,420 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 23:27:35] 2025-10-06 21:27:09,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832691140416)>', '<ExcThread(monitor, started 139831652906752)>']
[2025-10-06 23:27:35] 2025-10-06 21:27:14,839 | INFO     | all workflow threads have been joined
[2025-10-06 23:27:35] 2025-10-06 21:27:14,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 23:27:35] 2025-10-06 21:27:14,839 | INFO     | traces error code: 0
[2025-10-06 23:27:35] 2025-10-06 21:27:14,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 23:27:35] 2025-10-06 21:27:34,729 | INFO     | PID=3088501 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 23:27:35] 2025-10-06 21:27:34,731 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 23:27:35] 2025-10-06 21:27:34,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 23:27:35] 2025-10-06 21:27:34,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 23:27:35] 2025-10-06 21:27:34,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 23:27:35] 2025-10-06 21:27:34,731 | INFO     | [monitor] control thread has ended
[2025-10-06 23:27:35] 2025-10-06 21:27:34,885 [wrapper] ==== pilot stdout END ====
[2025-10-06 23:27:35] 2025-10-06 21:27:34,889 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 23:27:35] 2025-10-06 21:27:34,893 [wrapper] pilotpid: 3088501
[2025-10-06 23:27:35] 2025-10-06 21:27:34,897 [wrapper] Pilot exit status: 0
[2025-10-06 23:27:35] 2025-10-06 21:27:34,990 [wrapper] pandaids: 6832674577
[2025-10-06 23:27:35] 2025-10-06 21:27:35,015 [wrapper] cleanup supervisor_pilot 3088507 3088502
[2025-10-06 23:27:35] 2025-10-06 21:27:35,020 [wrapper] Test setup, not cleaning
[2025-10-06 23:27:35] 2025-10-06 21:27:35,024 [wrapper] apfmon messages muted
[2025-10-06 23:27:35] 2025-10-06 21:27:35,028 [wrapper] ==== wrapper stdout END ====
[2025-10-06 23:27:35] 2025-10-06 21:27:35,031 [wrapper] ==== wrapper stderr END ====
[2025-10-06 23:27:35]  *** Error codes and diagnostics ***
[2025-10-06 23:27:35]     "exeErrorCode": 65,
[2025-10-06 23:27:35]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-06 23:27:35]     "pilotErrorCode": 1305,
[2025-10-06 23:27:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-06 23:27:35]  *** Listing of results directory ***
[2025-10-06 23:27:35] total 215152
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc    552446 Oct  6 15:04 pilot3.tar.gz
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc      5112 Oct  6 15:23 queuedata.json
[2025-10-06 23:27:35] -rwx------ 1 boinc boinc     36292 Oct  6 15:24 runpilot2-wrapper.sh
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc       100 Oct  6 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 23:27:35] -rwxr-xr-x 1 boinc boinc      7986 Oct  6 23:19 run_atlas
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc       105 Oct  6 23:19 job.xml
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc      5985 Oct  6 23:19 init_data.xml
[2025-10-06 23:27:35] -rw-r--r-- 2 boinc boinc 216046222 Oct  6 23:19 EVNT.46376901._004161.pool.root.1
[2025-10-06 23:27:35] drwxrwx--x 2 boinc boinc        68 Oct  6 23:19 shared
[2025-10-06 23:27:35] -rw-r--r-- 2 boinc boinc    565601 Oct  6 23:19 input.tar.gz
[2025-10-06 23:27:35] -rw-r--r-- 2 boinc boinc     15120 Oct  6 23:19 start_atlas.sh
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc         0 Oct  6 23:19 boinc_lockfile
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc      2521 Oct  6 23:19 pandaJob.out
[2025-10-06 23:27:35] -rw------- 1 boinc boinc    975020 Oct  6 23:20 agis_schedconf.cvmfs.json
[2025-10-06 23:27:35] -rw------- 1 boinc boinc   1560401 Oct  6 23:20 agis_ddmendpoints.agis.ALL.json
[2025-10-06 23:27:35] drwx------ 4 boinc boinc       334 Oct  6 23:20 pilot3
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc       524 Oct  6 23:23 boinc_task_state.xml
[2025-10-06 23:27:35] -rw------- 1 boinc boinc     47877 Oct  6 23:24 log.46376905._112180.job.log.tgz.1
[2025-10-06 23:27:35] -rw------- 1 boinc boinc      8069 Oct  6 23:27 heartbeat.json
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc      8192 Oct  6 23:27 boinc_mmap_file
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc        23 Oct  6 23:27 wrapper_checkpoint.txt
[2025-10-06 23:27:35] -rw------- 1 boinc boinc        95 Oct  6 23:27 pilot_heartbeat.json
[2025-10-06 23:27:35] -rw------- 1 boinc boinc       747 Oct  6 23:27 pilotlog.txt
[2025-10-06 23:27:35] -rw------- 1 boinc boinc    157187 Oct  6 23:27 log.46376905._112180.job.log.1
[2025-10-06 23:27:35] -rw------- 1 boinc boinc       188 Oct  6 23:27 output.list
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc       620 Oct  6 23:27 runtime_log
[2025-10-06 23:27:35] -rw------- 1 boinc boinc    225280 Oct  6 23:27 result.tar.gz
[2025-10-06 23:27:35] -rw------- 1 boinc boinc       639 Oct  6 23:27 WLIODmXN0P8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvaTNDmyKipvm.diag
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc      8505 Oct  6 23:27 runtime_log.err
[2025-10-06 23:27:35] -rw-r--r-- 1 boinc boinc     21898 Oct  6 23:27 stderr.txt
[2025-10-06 23:27:35] No HITS result produced
[2025-10-06 23:27:35]  *** Contents of shared directory: ***
[2025-10-06 23:27:35] total 211776
[2025-10-06 23:27:35] -rw-r--r-- 2 boinc boinc 216046222 Oct  6 23:19 ATLAS.root_0
[2025-10-06 23:27:35] -rw-r--r-- 2 boinc boinc    565601 Oct  6 23:19 input.tar.gz
[2025-10-06 23:27:35] -rw-r--r-- 2 boinc boinc     15120 Oct  6 23:19 start_atlas.sh
[2025-10-06 23:27:35] -rw------- 1 boinc boinc    225280 Oct  6 23:27 result.tar.gz
23:27:37 (3084869): run_atlas exited; CPU time 135.342905
23:27:37 (3084869): called boinc_finish(0)

</stderr_txt>
]]>

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