Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:01:52 (1170544): wrapper (7.7.26015): starting
13:01:52 (1170544): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 13:01:52] Arguments: --nthreads 12
[2025-10-06 13:01:52] Threads: 12
[2025-10-06 13:01:52] Checking for CVMFS
[2025-10-06 13:01:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 13:01:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 13:01:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 13:01:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 13:01:54] 2.11.5.0 2660 23308 223904 151409 1 383 30742373 45568000 24232 130560 0 233888206 99.847 117385318 22026 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 13:01:54] CVMFS is ok
[2025-10-06 13:01:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 13:01:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 13:01:54] Further information can be found at the LHC@home message board.
[2025-10-06 13:01:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 13:01:54] Checking for apptainer binary...
[2025-10-06 13:01:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 13:01:54] Running /usr/bin/apptainer --version
[2025-10-06 13:01:54] apptainer version 1.4.1-1.el9
[2025-10-06 13:01:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 13:01:55] wns0032.triumf.lcg
[2025-10-06 13:01:55] apptainer works
[2025-10-06 13:01:55] Set ATHENA_PROC_NUMBER=12
[2025-10-06 13:01:55] Set ATHENA_CORE_NUMBER=12
[2025-10-06 13:01:55] Starting ATLAS job with PandaID=6832861627
[2025-10-06 13:01:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 13:07:39]  *** The last 200 lines of the pilot log: ***
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | could have reported an average CPU frequency of 2759 MHz (4 samples)
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | ..............................
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . Timing measurements:
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . get job = 0 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . initial setup = 3 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . payload setup = 24 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . stage-in = 0 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . payload execution = 44 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . stage-out = 1 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | . log creation = 0 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | ..............................
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832861627/pilotlog.txt
[2025-10-06 13:07:39] 2025-10-06 20:06:39,627 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 13:07:39] - Log from pilotlog.txt -
[2025-10-06 13:07:39] 2025-10-06 20:06:39,533 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832861627/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 13:07:39] 2025-10-06 20:06:39,533 | INFO     | extracted standard info from prmon json
[2025-10-06 13:07:39] 2025-10-06 20:06:39,533 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 13:07:39] 2025-10-06 20:06:39,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 13:07:39] 2025-10-06 20:06:39,534 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 13:07:39] 2025-10-06 20:06:39,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | WARNING  | wrong length of table data, x=[1759781037.0], y=[833.0] (must be same and length>=4)
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | could have reported an average CPU frequency of 2759 MHz (4 samples)
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | ..............................
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . Timing measurements:
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . get job = 0 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . initial setup = 3 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . payload setup = 24 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . stage-in = 0 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . payload execution = 44 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . stage-out = 1 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | . log creation = 0 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | ..............................
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832861627/pilotlog.txt
[2025-10-06 13:07:39] 2025-10-06 20:06:39,628 | WARNING  | 
[2025-10-06 13:07:39] [begin log extracts]
[2025-10-06 13:07:39] - Log from pilotlog.txt -
[2025-10-06 13:07:39] 2025-10-06 20:06:39,533 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832861627/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 13:07:39] 2025-10-06 20:06:39,533 | INFO     | extracted standard info from prmon json
[2025-10-06 13:07:39] 2025-10-06 20:06:39,533 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 13:07:39] 2025-10-06 20:06:39,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 13:07:39] 2025-10-06 20:06:39,534 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 13:07:39] 2025-10-06 20:06:39,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | WARNING  | wrong length of table data, x=[1759781037.0], y=[833.0] (must be same and length>=4)
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | could have reported an average CPU frequency of 2759 MHz (4 samples)
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | ..............................
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . Timing measurements:
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . get job = 0 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . initial setup = 3 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . payload setup = 24 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . stage-in = 0 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . payload execution = 44 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,537 | INFO     | . stage-out = 1 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | . log creation = 0 s
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | ..............................
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 13:07:39] 2025-10-06 20:06:39,538 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832861627/pilotlog.txt
[2025-10-06 13:07:39] [end log extracts]
[2025-10-06 13:07:39] 2025-10-06 20:06:39,628 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 13:07:39] 2025-10-06 20:06:39,629 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 13:07:39] 2025-10-06 20:06:40,332 | INFO     | 
[2025-10-06 13:07:39] 2025-10-06 20:06:40,332 | INFO     | job summary report
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | --------------------------------------------------
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | PanDA job id: 6832861627
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | task id: 46376905
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 13:04:16,526 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | pilot state: failed 
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | transexitcode: 65
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | exeerrorcode: 65
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | exitcode: 65
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | cpuconsumptiontime: 17 s
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | nevents: 0
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | neventsw: 0
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | pid: 1187867
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | pgrp: 1187867
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | corecount: 12
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | event service: False
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | sizes: {0: 2348817, 1: 2348817, 12: 2348845, 21: 2349135, 23: 2349163, 73: 2372558, 76: 2376850, 78: 2376906, 208: 2377100}
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | --------------------------------------------------
[2025-10-06 13:07:39] 2025-10-06 20:06:40,333 | INFO     | 
[2025-10-06 13:07:39] 2025-10-06 20:06:40,334 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 13:07:39] 2025-10-06 20:06:40,415 | INFO     | time since job start (250s) is within the limit (172800.0s)
[2025-10-06 13:07:39] 2025-10-06 20:06:40,415 | INFO     | 253s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-06 13:07:39] 2025-10-06 20:06:40,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 13:07:39] 2025-10-06 20:06:40,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,482 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 13:07:39] 2025-10-06 20:06:40,482 | INFO     | job 6832861627 has completed (purged errors)
[2025-10-06 13:07:39] 2025-10-06 20:06:40,482 | INFO     | overall cleanup function is called
[2025-10-06 13:07:39] 2025-10-06 20:06:41,488 | INFO     | --- collectZombieJob: --- 10, [1187867]
[2025-10-06 13:07:39] 2025-10-06 20:06:41,488 | INFO     | zombie collector waiting for pid 1187867
[2025-10-06 13:07:39] 2025-10-06 20:06:41,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 13:07:39] 2025-10-06 20:06:41,488 | INFO     | collected zombie processes
[2025-10-06 13:07:39] 2025-10-06 20:06:41,488 | INFO     | will attempt to kill all subprocesses of pid=1187867
[2025-10-06 13:07:39] 2025-10-06 20:06:43,813 | INFO     | process IDs to be killed: [1187867] (in reverse order)
[2025-10-06 13:07:39] 2025-10-06 20:06:43,865 | INFO     | PID=1174384 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 13:07:39] 2025-10-06 20:06:43,865 | INFO     | .. there are 42 such processes running
[2025-10-06 13:07:39] 2025-10-06 20:06:44,320 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 13:07:39] 2025-10-06 20:06:44,321 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 13:07:39] 2025-10-06 20:06:44,368 | INFO     | did not find any defunct processes belonging to 1187867
[2025-10-06 13:07:39] 2025-10-06 20:06:44,441 | INFO     | did not find any defunct processes belonging to 1187867
[2025-10-06 13:07:39] 2025-10-06 20:06:44,442 | INFO     | ready for new job
[2025-10-06 13:07:39] 2025-10-06 20:06:44,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 13:07:39] 2025-10-06 20:06:44,443 | INFO     | ***************************************
[2025-10-06 13:07:39] 2025-10-06 20:06:44,444 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 13:07:39] 2025-10-06 20:06:44,444 | INFO     | ***************************************
[2025-10-06 13:07:39] 2025-10-06 20:06:44,444 | INFO     | 
[2025-10-06 13:07:39] 2025-10-06 20:06:44,466 | INFO     | architecture information:
[2025-10-06 13:07:39] 2025-10-06 20:06:44,489 | INFO     | executing command: cat /etc/os-release
[2025-10-06 13:07:39] 2025-10-06 20:06:44,531 | INFO     | cat /etc/os-release:
[2025-10-06 13:07:39] NAME="CentOS Linux"
[2025-10-06 13:07:39] VERSION="7 (Core)"
[2025-10-06 13:07:39] ID="centos"
[2025-10-06 13:07:39] ID_LIKE="rhel fedora"
[2025-10-06 13:07:39] VERSION_ID="7"
[2025-10-06 13:07:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 13:07:39] ANSI_COLOR="0;31"
[2025-10-06 13:07:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 13:07:39] HOME_URL="https://www.centos.org/"
[2025-10-06 13:07:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 13:07:39] 
[2025-10-06 13:07:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 13:07:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 13:07:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 13:07:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 13:07:39] 
[2025-10-06 13:07:39] 2025-10-06 20:06:44,532 | INFO     | ***************************************
[2025-10-06 13:07:39] 2025-10-06 20:06:45,035 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 13:07:39] 2025-10-06 20:06:45,080 | INFO     | sufficient remaining disk space (2074264731648 B)
[2025-10-06 13:07:39] 2025-10-06 20:06:45,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 13:07:39] 2025-10-06 20:06:45,080 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 13:07:39] 2025-10-06 20:06:45,080 | INFO     | update_server=False
[2025-10-06 13:07:39] 2025-10-06 20:06:45,080 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 13:07:39] 2025-10-06 20:06:45,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 13:07:39] 2025-10-06 20:06:45,081 | INFO     | aborting loop
[2025-10-06 13:07:39] 2025-10-06 20:06:45,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 13:07:39] 2025-10-06 20:06:45,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 13:07:39] 2025-10-06 20:06:45,472 | INFO     | all data control threads have been joined
[2025-10-06 13:07:39] 2025-10-06 20:06:46,086 | INFO     | [job] retrieve thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:46,087 | INFO     | [job] job monitor thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:46,175 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:46,284 | INFO     | all payload control threads have been joined
[2025-10-06 13:07:39] 2025-10-06 20:06:46,399 | INFO     | all job control threads have been joined
[2025-10-06 13:07:39] 2025-10-06 20:06:46,433 | INFO     | [job] queue monitor thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:46,478 | INFO     | [data] control thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:46,488 | INFO     | [payload] failed_post thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:46,638 | INFO     | [data] copytool_in thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:46,650 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:46,985 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:47,096 | INFO     | [data] copytool_out thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:47,165 | INFO     | [job] validate thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:47,175 | INFO     | [payload] validate_post thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:47,209 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:47,295 | INFO     | [payload] control thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:47,405 | INFO     | [job] control thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:06:47,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 13:07:39] 2025-10-06 20:06:51,416 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 13:07:39] 2025-10-06 20:07:16,607 | INFO     | PID=1174384 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 13:07:39] 2025-10-06 20:07:16,607 | INFO     | .. there are 42 such processes running
[2025-10-06 13:07:39] 2025-10-06 20:07:16,607 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 13:07:39] 2025-10-06 20:07:16,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 13:07:39] 2025-10-06 20:07:16,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 13:07:39] 2025-10-06 20:07:30,253 | INFO     | [monitor] cgroup control has ended
[2025-10-06 13:07:39] 2025-10-06 20:07:32,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748544505664)>', '<ExcThread(monitor, started 139748001691392)>']
[2025-10-06 13:07:39] 2025-10-06 20:07:32,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 13:07:39] 2025-10-06 20:07:32,707 | INFO     | [monitor] control thread has ended
[2025-10-06 13:07:39] 2025-10-06 20:07:37,250 | INFO     | all workflow threads have been joined
[2025-10-06 13:07:39] 2025-10-06 20:07:37,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 13:07:39] 2025-10-06 20:07:37,251 | INFO     | traces error code: 0
[2025-10-06 13:07:39] 2025-10-06 20:07:37,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 13:07:39] 2025-10-06 20:07:37,855 [wrapper] ==== pilot stdout END ====
[2025-10-06 13:07:39] 2025-10-06 20:07:37,869 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 13:07:39] 2025-10-06 20:07:37,900 [wrapper] pilotpid: 1174384
[2025-10-06 13:07:39] 2025-10-06 20:07:37,943 [wrapper] Pilot exit status: 0
[2025-10-06 13:07:39] 2025-10-06 20:07:38,070 [wrapper] pandaids: 6832861627
[2025-10-06 13:07:39] 2025-10-06 20:07:38,402 [wrapper] cleanup supervisor_pilot 1174390 1174385
[2025-10-06 13:07:39] 2025-10-06 20:07:38,440 [wrapper] Test setup, not cleaning
[2025-10-06 13:07:39] 2025-10-06 20:07:38,449 [wrapper] apfmon messages muted
[2025-10-06 13:07:39] 2025-10-06 20:07:38,463 [wrapper] ==== wrapper stdout END ====
[2025-10-06 13:07:39] 2025-10-06 20:07:38,497 [wrapper] ==== wrapper stderr END ====
[2025-10-06 13:07:39]  *** Error codes and diagnostics ***
[2025-10-06 13:07:39]     "exeErrorCode": 65,
[2025-10-06 13:07:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 13:07:39]     "pilotErrorCode": 1305,
[2025-10-06 13:07:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 13:07:39]  *** Listing of results directory ***
[2025-10-06 13:07:39] total 213776
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc    552446 Oct  6 11:06 pilot3.tar.gz
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc      5112 Oct  6 11:07 queuedata.json
[2025-10-06 13:07:39] -rwx------. 1 boinc boinc     36292 Oct  6 11:07 runpilot2-wrapper.sh
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc       100 Oct  6 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 13:07:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 13:01 run_atlas
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc       105 Oct  6 13:01 job.xml
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc      6593 Oct  6 13:01 init_data.xml
[2025-10-06 13:07:39] -rw-r--r--. 2 boinc boinc 214793197 Oct  6 13:01 EVNT.46376901._004312.pool.root.1
[2025-10-06 13:07:39] -rw-r--r--. 2 boinc boinc     15120 Oct  6 13:01 start_atlas.sh
[2025-10-06 13:07:39] drwxrwx--x. 2 boinc boinc      4096 Oct  6 13:01 shared
[2025-10-06 13:07:39] -rw-r--r--. 2 boinc boinc    565604 Oct  6 13:01 input.tar.gz
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc         0 Oct  6 13:01 boinc_lockfile
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc      2521 Oct  6 13:01 pandaJob.out
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc    975026 Oct  6 13:02 agis_schedconf.cvmfs.json
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc   1560401 Oct  6 13:02 agis_ddmendpoints.agis.ALL.json
[2025-10-06 13:07:39] drwx------. 4 boinc boinc      4096 Oct  6 13:02 pilot3
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc       523 Oct  6 13:04 boinc_task_state.xml
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc       958 Oct  6 13:04 memory_monitor_summary.json
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc     22076 Oct  6 13:04 log.46376905._116244.job.log.tgz.1
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc        95 Oct  6 13:06 pilot_heartbeat.json
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc      8382 Oct  6 13:06 heartbeat.json
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc      4823 Oct  6 13:07 pilotlog.txt
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc      8192 Oct  6 13:07 boinc_mmap_file
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc        22 Oct  6 13:07 wrapper_checkpoint.txt
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc     92327 Oct  6 13:07 log.46376905._116244.job.log.1
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc       188 Oct  6 13:07 output.list
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc       620 Oct  6 13:07 runtime_log
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc    133120 Oct  6 13:07 result.tar.gz
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc      8528 Oct  6 13:07 runtime_log.err
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc       644 Oct  6 13:07 rcuKDmZn4P8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6jJMDmAhyqXn.diag
[2025-10-06 13:07:39] -rw-r--r--. 1 boinc boinc     21931 Oct  6 13:07 stderr.txt
[2025-10-06 13:07:39] No HITS result produced
[2025-10-06 13:07:39]  *** Contents of shared directory: ***
[2025-10-06 13:07:39] total 210464
[2025-10-06 13:07:39] -rw-r--r--. 2 boinc boinc 214793197 Oct  6 13:01 ATLAS.root_0
[2025-10-06 13:07:39] -rw-r--r--. 2 boinc boinc     15120 Oct  6 13:01 start_atlas.sh
[2025-10-06 13:07:39] -rw-r--r--. 2 boinc boinc    565604 Oct  6 13:01 input.tar.gz
[2025-10-06 13:07:39] -rw-------. 1 boinc boinc    133120 Oct  6 13:07 result.tar.gz
13:07:41 (1170544): run_atlas exited; CPU time 27.016081
13:07:41 (1170544): called boinc_finish(0)

</stderr_txt>
]]>

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