Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:13:48 (3925069): wrapper (7.7.26015): starting
15:13:48 (3925069): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 15:13:48] Arguments: --nthreads 8
[2025-10-06 15:13:48] Threads: 8
[2025-10-06 15:13:48] Checking for CVMFS
[2025-10-06 15:13:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 15:13:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 15:13:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 15:13:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 15:13:49] 2.13.2.0 24018 121027 457980 151408 0 1138 31181499 32935937 41631 16776704 0 435500148 99.692 360986924 17672 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-06 15:13:49] CVMFS is ok
[2025-10-06 15:13:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 15:13:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 15:13:49] Further information can be found at the LHC@home message board.
[2025-10-06 15:13:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 15:13:49] Checking for apptainer binary...
[2025-10-06 15:13:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 15:13:49] Running /usr/bin/apptainer --version
[2025-10-06 15:13:49] apptainer version 1.4.2-1.el9
[2025-10-06 15:13:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 15:13:49] c7-2-16.aglt2.org
[2025-10-06 15:13:49] apptainer works
[2025-10-06 15:13:49] Set ATHENA_PROC_NUMBER=8
[2025-10-06 15:13:49] Set ATHENA_CORE_NUMBER=8
[2025-10-06 15:13:49] Starting ATLAS job with PandaID=6826211817
[2025-10-06 15:13:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 19:23:49]  *** The last 200 lines of the pilot log: ***
[2025-10-06 19:23:49] 2025-10-06 23:22:53,075 | INFO     | PID=3929077 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 19:23:49] 2025-10-06 23:22:53,076 | INFO     | .. there are 44 such processes running
[2025-10-06 19:23:49] 2025-10-06 23:22:54,077 | INFO     | time since job start (14918s) is within the limit (172800.0s)
[2025-10-06 19:23:49] 2025-10-06 23:22:54,662 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-06 19:23:49] 2025-10-06 23:22:54,696 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3194.321583333334
[2025-10-06 19:23:49] 2025-10-06 23:22:54,746 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6826211817/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 19:23:49] 2025-10-06 23:22:54,746 | INFO     | extracted standard info from prmon json
[2025-10-06 19:23:49] 2025-10-06 23:22:54,747 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 19:23:49] 2025-10-06 23:22:54,747 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 19:23:49] 2025-10-06 23:22:54,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 19:23:49] 2025-10-06 23:22:54,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 19:23:49] 2025-10-06 23:22:54,754 | INFO     | fitting pss+swap vs Time
[2025-10-06 19:23:49] 2025-10-06 23:22:54,760 | INFO     | sum of square deviations: 4504575640.077856
[2025-10-06 19:23:49] 2025-10-06 23:22:54,762 | INFO     | sum of deviations: -33014191242.836075
[2025-10-06 19:23:49] 2025-10-06 23:22:54,762 | INFO     | mean x: 1759785516.5614755
[2025-10-06 19:23:49] 2025-10-06 23:22:54,762 | INFO     | mean y: 2393786.655737705
[2025-10-06 19:23:49] 2025-10-06 23:22:54,762 | INFO     | -- intersect: 12899922928.630466
[2025-10-06 19:23:49] 2025-10-06 23:22:54,762 | INFO     | intersect: 12899922928.630466
[2025-10-06 19:23:49] 2025-10-06 23:22:54,763 | INFO     | chi2: 3.7565539066207543
[2025-10-06 19:23:49] 2025-10-06 23:22:54,763 | INFO     | sum of square deviations: 4233256055.397503
[2025-10-06 19:23:49] 2025-10-06 23:22:54,773 | INFO     | sum of deviations: -17062002947.857763
[2025-10-06 19:23:49] 2025-10-06 23:22:54,773 | INFO     | mean x: 1759785364.0502093
[2025-10-06 19:23:49] 2025-10-06 23:22:54,773 | INFO     | mean y: 2402624.1548117157
[2025-10-06 19:23:49] 2025-10-06 23:22:54,773 | INFO     | -- intersect: 7095161171.263823
[2025-10-06 19:23:49] 2025-10-06 23:22:54,773 | INFO     | intersect: 7095161171.263823
[2025-10-06 19:23:49] 2025-10-06 23:22:54,773 | INFO     | chi2: 3.1045473870767673
[2025-10-06 19:23:49] 2025-10-06 23:22:54,774 | INFO     | current chi2=3.1045473870767673 (change=17.356506408569178 %)
[2025-10-06 19:23:49] 2025-10-06 23:22:54,774 | INFO     | right removable region: 238
[2025-10-06 19:23:49] 2025-10-06 23:22:54,774 | INFO     | sum of square deviations: 4233291560.0585785
[2025-10-06 19:23:49] 2025-10-06 23:22:54,789 | INFO     | sum of deviations: -88254964276.51881
[2025-10-06 19:23:49] 2025-10-06 23:22:54,790 | INFO     | mean x: 1759785669.0627615
[2025-10-06 19:23:49] 2025-10-06 23:22:54,790 | INFO     | mean y: 2424710.3012552303
[2025-10-06 19:23:49] 2025-10-06 23:22:54,790 | INFO     | -- intersect: 36690146109.60754
[2025-10-06 19:23:49] 2025-10-06 23:22:54,790 | INFO     | intersect: 36690146109.60754
[2025-10-06 19:23:49] 2025-10-06 23:22:54,790 | INFO     | chi2: 1.343526797380247
[2025-10-06 19:23:49] 2025-10-06 23:22:54,790 | INFO     | current chi2=1.343526797380247 (change=64.23512530959978 %)
[2025-10-06 19:23:49] 2025-10-06 23:22:54,790 | INFO     | sum of square deviations: 3973123967.5384765
[2025-10-06 19:23:49] 2025-10-06 23:22:54,792 | INFO     | sum of deviations: -100559800013.35889
[2025-10-06 19:23:49] 2025-10-06 23:22:54,792 | INFO     | mean x: 1759785821.5641026
[2025-10-06 19:23:49] 2025-10-06 23:22:54,792 | INFO     | mean y: 2431894.623931624
[2025-10-06 19:23:49] 2025-10-06 23:22:54,792 | INFO     | -- intersect: 44542625386.86661
[2025-10-06 19:23:49] 2025-10-06 23:22:54,792 | INFO     | intersect: 44542625386.86661
[2025-10-06 19:23:49] 2025-10-06 23:22:54,792 | INFO     | chi2: 1.146825736135174
[2025-10-06 19:23:49] 2025-10-06 23:22:54,792 | INFO     | current chi2=1.146825736135174 (change=14.64065038588154 %)
[2025-10-06 19:23:49] 2025-10-06 23:22:54,793 | INFO     | left removable region: 20
[2025-10-06 19:23:49] 2025-10-06 23:22:54,793 | INFO     | sum of square deviations: 3212551381.8394527
[2025-10-06 19:23:49] 2025-10-06 23:22:54,798 | INFO     | sum of deviations: -74314030160.19722
[2025-10-06 19:23:49] 2025-10-06 23:22:54,798 | INFO     | mean x: 1759785943.5550458
[2025-10-06 19:23:49] 2025-10-06 23:22:54,798 | INFO     | mean y: 2436528.2247706424
[2025-10-06 19:23:49] 2025-10-06 23:22:54,798 | INFO     | -- intersect: 40710512490.56477
[2025-10-06 19:23:49] 2025-10-06 23:22:54,799 | INFO     | intersect: 40710512490.56477
[2025-10-06 19:23:49] 2025-10-06 23:22:54,799 | INFO     | chi2: 0.42877826821015547
[2025-10-06 19:23:49] 2025-10-06 23:22:54,799 | INFO     | -- intersect: 40710512490.56477
[2025-10-06 19:23:49] 2025-10-06 23:22:54,799 | INFO     | current memory leak: -23.13 B/s (using 218 data points, chi2=0.43)
[2025-10-06 19:23:49] 2025-10-06 23:22:54,799 | INFO     | could have reported an average CPU frequency of 3111 MHz (12 samples)
[2025-10-06 19:23:49] 2025-10-06 23:22:54,800 | INFO     | ..............................
[2025-10-06 19:23:49] 2025-10-06 23:22:54,800 | INFO     | . Timing measurements:
[2025-10-06 19:23:49] 2025-10-06 23:22:54,800 | INFO     | . get job = 0 s
[2025-10-06 19:23:49] 2025-10-06 23:22:54,800 | INFO     | . initial setup = 4 s
[2025-10-06 19:23:49] 2025-10-06 23:22:54,800 | INFO     | . payload setup = 16 s
[2025-10-06 19:23:49] 2025-10-06 23:22:54,800 | INFO     | . stage-in = 0 s
[2025-10-06 19:23:49] 2025-10-06 23:22:54,800 | INFO     | . payload execution = 14846 s
[2025-10-06 19:23:49] 2025-10-06 23:22:54,800 | INFO     | . stage-out = 4 s
[2025-10-06 19:23:49] 2025-10-06 23:22:54,800 | INFO     | . log creation = 0 s
[2025-10-06 19:23:49] 2025-10-06 23:22:54,800 | INFO     | ..............................
[2025-10-06 19:23:49] 2025-10-06 23:22:54,935 | INFO     | 
[2025-10-06 19:23:49] 2025-10-06 23:22:54,936 | INFO     | job summary report
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | --------------------------------------------------
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | PanDA job id: 6826211817
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | task id: 46373048
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | errors: (none)
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | pilot state: finished 
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | transexitcode: 0
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | exeerrorcode: 0
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | exeerrordiag: 
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | exitcode: 0
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | exitmsg: OK
[2025-10-06 19:23:49] 2025-10-06 23:22:54,937 | INFO     | cpuconsumptiontime: 43156 s
[2025-10-06 19:23:49] 2025-10-06 23:22:54,938 | INFO     | nevents: 400
[2025-10-06 19:23:49] 2025-10-06 23:22:54,938 | INFO     | neventsw: 0
[2025-10-06 19:23:49] 2025-10-06 23:22:54,938 | INFO     | pid: 3936313
[2025-10-06 19:23:49] 2025-10-06 23:22:54,938 | INFO     | pgrp: 3936313
[2025-10-06 19:23:49] 2025-10-06 23:22:54,938 | INFO     | corecount: 8
[2025-10-06 19:23:49] 2025-10-06 23:22:54,938 | INFO     | event service: False
[2025-10-06 19:23:49] 2025-10-06 23:22:54,938 | INFO     | sizes: {0: 2348670, 1: 2348869, 11: 2349131, 12: 2349159, 14866: 2380316, 14872: 2389314, 14875: 2389498, 14894: 2389692}
[2025-10-06 19:23:49] 2025-10-06 23:22:54,938 | INFO     | --------------------------------------------------
[2025-10-06 19:23:49] 2025-10-06 23:22:54,938 | INFO     | 
[2025-10-06 19:23:49] 2025-10-06 23:22:54,938 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-06 19:23:49] 2025-10-06 23:22:54,969 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 19:23:49] 2025-10-06 23:22:54,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,971 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 19:23:49] 2025-10-06 23:22:54,971 | INFO     | job 6826211817 has completed (purged errors)
[2025-10-06 19:23:49] 2025-10-06 23:22:54,971 | INFO     | overall cleanup function is called
[2025-10-06 19:23:49] 2025-10-06 23:22:55,999 | INFO     | --- collectZombieJob: --- 10, [3936313]
[2025-10-06 19:23:49] 2025-10-06 23:22:55,999 | INFO     | zombie collector waiting for pid 3936313
[2025-10-06 19:23:49] 2025-10-06 23:22:55,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 19:23:49] 2025-10-06 23:22:56,000 | INFO     | collected zombie processes
[2025-10-06 19:23:49] 2025-10-06 23:22:56,000 | INFO     | will attempt to kill all subprocesses of pid=3936313
[2025-10-06 19:23:49] 2025-10-06 23:22:57,340 | INFO     | process IDs to be killed: [3936313] (in reverse order)
[2025-10-06 19:23:49] 2025-10-06 23:22:57,555 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 19:23:49] 2025-10-06 23:22:57,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 19:23:49] 2025-10-06 23:22:57,595 | INFO     | did not find any defunct processes belonging to 3936313
[2025-10-06 19:23:49] 2025-10-06 23:22:57,617 | INFO     | did not find any defunct processes belonging to 3936313
[2025-10-06 19:23:49] 2025-10-06 23:22:57,617 | INFO     | ready for new job
[2025-10-06 19:23:49] 2025-10-06 23:22:57,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 19:23:49] 2025-10-06 23:22:57,620 | INFO     | ***************************************
[2025-10-06 19:23:49] 2025-10-06 23:22:57,620 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 19:23:49] 2025-10-06 23:22:57,620 | INFO     | ***************************************
[2025-10-06 19:23:49] 2025-10-06 23:22:57,620 | INFO     | 
[2025-10-06 19:23:49] 2025-10-06 23:22:57,662 | INFO     | architecture information:
[2025-10-06 19:23:49] 2025-10-06 23:22:57,688 | INFO     | executing command: cat /etc/os-release
[2025-10-06 19:23:49] 2025-10-06 23:22:57,769 | INFO     | cat /etc/os-release:
[2025-10-06 19:23:49] NAME="CentOS Linux"
[2025-10-06 19:23:49] VERSION="7 (Core)"
[2025-10-06 19:23:49] ID="centos"
[2025-10-06 19:23:49] ID_LIKE="rhel fedora"
[2025-10-06 19:23:49] VERSION_ID="7"
[2025-10-06 19:23:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 19:23:49] ANSI_COLOR="0;31"
[2025-10-06 19:23:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 19:23:49] HOME_URL="https://www.centos.org/"
[2025-10-06 19:23:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 19:23:49] 
[2025-10-06 19:23:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 19:23:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 19:23:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 19:23:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 19:23:49] 
[2025-10-06 19:23:49] 2025-10-06 23:22:57,770 | INFO     | ***************************************
[2025-10-06 19:23:49] 2025-10-06 23:22:58,290 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-06 19:23:49] 2025-10-06 23:22:58,372 | INFO     | sufficient remaining disk space (74186752000 B)
[2025-10-06 19:23:49] 2025-10-06 23:22:58,372 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 19:23:49] 2025-10-06 23:22:58,373 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 19:23:49] 2025-10-06 23:22:58,373 | INFO     | update_server=False
[2025-10-06 19:23:49] 2025-10-06 23:22:58,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 19:23:49] 2025-10-06 23:22:58,558 | INFO     | all data control threads have been joined
[2025-10-06 19:23:49] 2025-10-06 23:22:58,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 19:23:49] 2025-10-06 23:22:58,762 | INFO     | aborting loop
[2025-10-06 19:23:49] 2025-10-06 23:22:58,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 19:23:49] 2025-10-06 23:22:59,057 | INFO     | all job control threads have been joined
[2025-10-06 19:23:49] 2025-10-06 23:22:59,253 | INFO     | all payload control threads have been joined
[2025-10-06 19:23:49] 2025-10-06 23:22:59,378 | INFO     | [job] retrieve thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:22:59,564 | INFO     | [data] control thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:22:59,647 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:22:59,659 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:22:59,768 | INFO     | [job] job monitor thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:22:59,950 | INFO     | [job] validate thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:22:59,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 19:23:49] 2025-10-06 23:22:59,954 | INFO     | [data] copytool_in thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:23:00,033 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:23:00,067 | INFO     | [job] control thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:23:00,160 | INFO     | [payload] failed_post thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:23:00,259 | INFO     | [payload] control thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:23:00,451 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:23:00,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 19:23:49] 2025-10-06 23:23:00,930 | INFO     | [payload] validate_post thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:23:00,955 | INFO     | [data] copytool_out thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:23:00,960 | INFO     | [job] queue monitor thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:23:04,585 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 19:23:49] 2025-10-06 23:23:27,986 | INFO     | PID=3929077 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 19:23:49] 2025-10-06 23:23:27,986 | INFO     | .. there are 44 such processes running
[2025-10-06 19:23:49] 2025-10-06 23:23:27,987 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 19:23:49] 2025-10-06 23:23:27,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 19:23:49] 2025-10-06 23:23:27,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 19:23:49] 2025-10-06 23:23:41,671 | INFO     | [monitor] cgroup control has ended
[2025-10-06 19:23:49] 2025-10-06 23:23:42,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139908126193472)>', '<ExcThread(monitor, started 139907410421504)>']
[2025-10-06 19:23:49] 2025-10-06 23:23:42,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 19:23:49] 2025-10-06 23:23:42,104 | INFO     | [monitor] control thread has ended
[2025-10-06 19:23:49] 2025-10-06 23:23:47,120 | INFO     | all workflow threads have been joined
[2025-10-06 19:23:49] 2025-10-06 23:23:47,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 19:23:49] 2025-10-06 23:23:47,199 | INFO     | traces error code: 0
[2025-10-06 19:23:49] 2025-10-06 23:23:47,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 19:23:49] 2025-10-06 23:23:48,330 [wrapper] ==== pilot stdout END ====
[2025-10-06 19:23:49] 2025-10-06 23:23:48,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 19:23:49] 2025-10-06 23:23:48,401 [wrapper] pilotpid: 3929077
[2025-10-06 19:23:49] 2025-10-06 23:23:48,404 [wrapper] Pilot exit status: 0
[2025-10-06 19:23:49] 2025-10-06 23:23:48,549 [wrapper] pandaids: 6826211817
[2025-10-06 19:23:49] 2025-10-06 23:23:48,794 [wrapper] cleanup supervisor_pilot  837489 3929078
[2025-10-06 19:23:49] 2025-10-06 23:23:48,800 [wrapper] Test setup, not cleaning
[2025-10-06 19:23:49] 2025-10-06 23:23:48,820 [wrapper] apfmon messages muted
[2025-10-06 19:23:49] 2025-10-06 23:23:48,831 [wrapper] ==== wrapper stdout END ====
[2025-10-06 19:23:49] 2025-10-06 23:23:48,882 [wrapper] ==== wrapper stderr END ====
[2025-10-06 19:23:49]  *** Error codes and diagnostics ***
[2025-10-06 19:23:49]     "exeErrorCode": 0,
[2025-10-06 19:23:49]     "exeErrorDiag": "",
[2025-10-06 19:23:49]     "pilotErrorCode": 0,
[2025-10-06 19:23:49]     "pilotErrorDiag": "",
[2025-10-06 19:23:49]  *** Listing of results directory ***
[2025-10-06 19:23:49] total 415220
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas    552446 Sep 30 19:23 pilot3.tar.gz
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas      5112 Sep 30 19:35 queuedata.json
[2025-10-06 19:23:49] -rwx------. 1 boincer umatlas     36292 Sep 30 19:35 runpilot2-wrapper.sh
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas       100 Oct  6 15:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 19:23:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 15:13 run_atlas
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas       105 Oct  6 15:13 job.xml
[2025-10-06 19:23:49] -rw-r--r--. 2 boincer umatlas 220394216 Oct  6 15:13 EVNT.46373045._002409.pool.root.1
[2025-10-06 19:23:49] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 15:13 start_atlas.sh
[2025-10-06 19:23:49] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 15:13 shared
[2025-10-06 19:23:49] -rw-r--r--. 2 boincer umatlas    565605 Oct  6 15:13 input.tar.gz
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas         0 Oct  6 15:13 boinc_lockfile
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas      2538 Oct  6 15:13 pandaJob.out
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas    975018 Oct  6 15:14 agis_schedconf.cvmfs.json
[2025-10-06 19:23:49] drwx------. 4 boincer umatlas      4096 Oct  6 15:14 pilot3
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas      6934 Oct  6 19:19 init_data.xml
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas 195863675 Oct  6 19:21 HITS.46373048._072969.pool.root.1
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas       530 Oct  6 19:21 boinc_task_state.xml
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas      1046 Oct  6 19:22 memory_monitor_summary.json
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas   1560401 Oct  6 19:22 agis_ddmendpoints.agis.ALL.json
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas    486444 Oct  6 19:22 log.46373048._072969.job.log.tgz.1
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas        95 Oct  6 19:22 pilot_heartbeat.json
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas      7802 Oct  6 19:22 heartbeat.json
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas      8192 Oct  6 19:23 boinc_mmap_file
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas      4824 Oct  6 19:23 pilotlog.txt
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas        28 Oct  6 19:23 wrapper_checkpoint.txt
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas   2034668 Oct  6 19:23 log.46373048._072969.job.log.1
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas       357 Oct  6 19:23 output.list
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas       620 Oct  6 19:23 runtime_log
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas   2539520 Oct  6 19:23 result.tar.gz
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas       660 Oct  6 19:23 TiPMDmx3yN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsKANDmPHl1qm.diag
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas      8699 Oct  6 19:23 runtime_log.err
[2025-10-06 19:23:49] -rw-r--r--. 1 boincer umatlas     21273 Oct  6 19:23 stderr.txt
[2025-10-06 19:23:49] HITS file was successfully produced:
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas 195863675 Oct  6 19:21 shared/HITS.pool.root.1
[2025-10-06 19:23:49]  *** Contents of shared directory: ***
[2025-10-06 19:23:49] total 409564
[2025-10-06 19:23:49] -rw-r--r--. 2 boincer umatlas 220394216 Oct  6 15:13 ATLAS.root_0
[2025-10-06 19:23:49] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 15:13 start_atlas.sh
[2025-10-06 19:23:49] -rw-r--r--. 2 boincer umatlas    565605 Oct  6 15:13 input.tar.gz
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas 195863675 Oct  6 19:21 HITS.pool.root.1
[2025-10-06 19:23:49] -rw-------. 1 boincer umatlas   2539520 Oct  6 19:23 result.tar.gz
19:23:51 (3925069): run_atlas exited; CPU time 43802.610531
19:23:51 (3925069): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN