Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:03:34 (3416260): wrapper (7.7.26015): starting
16:03:34 (3416260): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 16:03:34] Arguments: --nthreads 8
[2025-10-06 16:03:34] Threads: 8
[2025-10-06 16:03:34] Checking for CVMFS
[2025-10-06 16:03:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 16:03:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 16:03:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 16:03:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 16:03:35] 2.13.2.0 3144059 121059 475148 151409 0 655 37891900 40960000 16205 16776704 1 232941449 99.689 192014936 21500 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-06 16:03:35] CVMFS is ok
[2025-10-06 16:03:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 16:03:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 16:03:35] Further information can be found at the LHC@home message board.
[2025-10-06 16:03:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 16:03:35] Checking for apptainer binary...
[2025-10-06 16:03:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 16:03:35] Running /usr/bin/apptainer --version
[2025-10-06 16:03:35] apptainer version 1.4.2-1.el9
[2025-10-06 16:03:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 16:03:36] c7-11-15.aglt2.org
[2025-10-06 16:03:36] apptainer works
[2025-10-06 16:03:36] Set ATHENA_PROC_NUMBER=8
[2025-10-06 16:03:36] Set ATHENA_CORE_NUMBER=8
[2025-10-06 16:03:36] Starting ATLAS job with PandaID=6829875876
[2025-10-06 16:03:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 19:23:25]  *** The last 200 lines of the pilot log: ***
[2025-10-06 19:23:25] 2025-10-06 23:22:15,189 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 19:23:25] 2025-10-06 23:22:15,191 | INFO     | fitting pss+swap vs Time
[2025-10-06 19:23:25] 2025-10-06 23:22:15,191 | INFO     | sum of square deviations: 2264186530.1855736
[2025-10-06 19:23:25] 2025-10-06 23:22:15,192 | INFO     | sum of deviations: 9806402830.670103
[2025-10-06 19:23:25] 2025-10-06 23:22:15,192 | INFO     | mean x: 1759786993.6804123
[2025-10-06 19:23:25] 2025-10-06 23:22:15,192 | INFO     | mean y: 2100551.12371134
[2025-10-06 19:23:25] 2025-10-06 23:22:15,192 | INFO     | -- intersect: -7619700888.879388
[2025-10-06 19:23:25] 2025-10-06 23:22:15,192 | INFO     | intersect: -7619700888.879388
[2025-10-06 19:23:25] 2025-10-06 23:22:15,193 | INFO     | chi2: 2.4140417071864433
[2025-10-06 19:23:25] 2025-10-06 23:22:15,193 | INFO     | sum of square deviations: 2093605427.8836076
[2025-10-06 19:23:25] 2025-10-06 23:22:15,194 | INFO     | sum of deviations: 20850472414.645504
[2025-10-06 19:23:25] 2025-10-06 23:22:15,194 | INFO     | mean x: 1759786841.1798942
[2025-10-06 19:23:25] 2025-10-06 23:22:15,194 | INFO     | mean y: 2110202.275132275
[2025-10-06 19:23:25] 2025-10-06 23:22:15,194 | INFO     | -- intersect: -17523822095.659958
[2025-10-06 19:23:25] 2025-10-06 23:22:15,194 | INFO     | intersect: -17523822095.659958
[2025-10-06 19:23:25] 2025-10-06 23:22:15,194 | INFO     | chi2: 1.5391392086463664
[2025-10-06 19:23:25] 2025-10-06 23:22:15,194 | INFO     | current chi2=1.5391392086463664 (change=36.24222795884386 %)
[2025-10-06 19:23:25] 2025-10-06 23:22:15,195 | INFO     | sum of square deviations: 1931780843.1086977
[2025-10-06 19:23:25] 2025-10-06 23:22:15,195 | INFO     | sum of deviations: 19269710139.55434
[2025-10-06 19:23:25] 2025-10-06 23:22:15,196 | INFO     | mean x: 1759786688.6630435
[2025-10-06 19:23:25] 2025-10-06 23:22:15,196 | INFO     | mean y: 2108706.8315217393
[2025-10-06 19:23:25] 2025-10-06 23:22:15,196 | INFO     | -- intersect: -17551942271.028248
[2025-10-06 19:23:25] 2025-10-06 23:22:15,196 | INFO     | intersect: -17551942271.028248
[2025-10-06 19:23:25] 2025-10-06 23:22:15,196 | INFO     | chi2: 1.5387050381197005
[2025-10-06 19:23:25] 2025-10-06 23:22:15,196 | INFO     | current chi2=1.5387050381197005 (change=0.02820865872475476 %)
[2025-10-06 19:23:25] 2025-10-06 23:22:15,196 | INFO     | right removable region: 183
[2025-10-06 19:23:25] 2025-10-06 23:22:15,196 | INFO     | sum of square deviations: 2093595912.5185223
[2025-10-06 19:23:25] 2025-10-06 23:22:15,197 | INFO     | sum of deviations: -13761228718.40741
[2025-10-06 19:23:25] 2025-10-06 23:22:15,197 | INFO     | mean x: 1759787146.1851852
[2025-10-06 19:23:25] 2025-10-06 23:22:15,197 | INFO     | mean y: 2121377.497354497
[2025-10-06 19:23:25] 2025-10-06 23:22:15,197 | INFO     | -- intersect: 11569221441.824377
[2025-10-06 19:23:25] 2025-10-06 23:22:15,198 | INFO     | intersect: 11569221441.824377
[2025-10-06 19:23:25] 2025-10-06 23:22:15,198 | INFO     | chi2: 1.1124573658985228
[2025-10-06 19:23:25] 2025-10-06 23:22:15,198 | INFO     | current chi2=1.1124573658985228 (change=53.917226757648365 %)
[2025-10-06 19:23:25] 2025-10-06 23:22:15,198 | INFO     | sum of square deviations: 1931796157.3423827
[2025-10-06 19:23:25] 2025-10-06 23:22:15,199 | INFO     | sum of deviations: -5258299512.630435
[2025-10-06 19:23:25] 2025-10-06 23:22:15,199 | INFO     | mean x: 1759787298.6902175
[2025-10-06 19:23:25] 2025-10-06 23:22:15,199 | INFO     | mean y: 2113356.7608695654
[2025-10-06 19:23:25] 2025-10-06 23:22:15,199 | INFO     | -- intersect: 4792209175.0309725
[2025-10-06 19:23:25] 2025-10-06 23:22:15,199 | INFO     | intersect: 4792209175.0309725
[2025-10-06 19:23:25] 2025-10-06 23:22:15,199 | INFO     | chi2: 1.0224833152543924
[2025-10-06 19:23:25] 2025-10-06 23:22:15,199 | INFO     | current chi2=1.0224833152543924 (change=8.08786506361609 %)
[2025-10-06 19:23:25] 2025-10-06 23:22:15,200 | INFO     | left removable region: 20
[2025-10-06 19:23:25] 2025-10-06 23:22:15,200 | INFO     | sum of square deviations: 1342979684.4785218
[2025-10-06 19:23:25] 2025-10-06 23:22:15,200 | INFO     | sum of deviations: 4598712132.969325
[2025-10-06 19:23:25] 2025-10-06 23:22:15,200 | INFO     | mean x: 1759787268.1840491
[2025-10-06 19:23:25] 2025-10-06 23:22:15,201 | INFO     | mean y: 2122243.8343558284
[2025-10-06 19:23:25] 2025-10-06 23:22:15,201 | INFO     | -- intersect: -6023847586.666351
[2025-10-06 19:23:25] 2025-10-06 23:22:15,201 | INFO     | intersect: -6023847586.666351
[2025-10-06 19:23:25] 2025-10-06 23:22:15,201 | INFO     | chi2: 0.044922575125732285
[2025-10-06 19:23:25] 2025-10-06 23:22:15,201 | INFO     | -- intersect: -6023847586.666351
[2025-10-06 19:23:25] 2025-10-06 23:22:15,201 | INFO     | current memory leak: 3.42 B/s (using 163 data points, chi2=0.04)
[2025-10-06 19:23:25] 2025-10-06 23:22:15,201 | INFO     | could have reported an average CPU frequency of 3287 MHz (10 samples)
[2025-10-06 19:23:25] 2025-10-06 23:22:15,202 | INFO     | ..............................
[2025-10-06 19:23:25] 2025-10-06 23:22:15,202 | INFO     | . Timing measurements:
[2025-10-06 19:23:25] 2025-10-06 23:22:15,202 | INFO     | . get job = 0 s
[2025-10-06 19:23:25] 2025-10-06 23:22:15,202 | INFO     | . initial setup = 2 s
[2025-10-06 19:23:25] 2025-10-06 23:22:15,202 | INFO     | . payload setup = 20 s
[2025-10-06 19:23:25] 2025-10-06 23:22:15,202 | INFO     | . stage-in = 0 s
[2025-10-06 19:23:25] 2025-10-06 23:22:15,202 | INFO     | . payload execution = 11812 s
[2025-10-06 19:23:25] 2025-10-06 23:22:15,202 | INFO     | . stage-out = 2 s
[2025-10-06 19:23:25] 2025-10-06 23:22:15,202 | INFO     | . log creation = 0 s
[2025-10-06 19:23:25] 2025-10-06 23:22:15,202 | INFO     | ..............................
[2025-10-06 19:23:25] 2025-10-06 23:22:15,458 | INFO     | 
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | job summary report
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | --------------------------------------------------
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | PanDA job id: 6829875876
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | task id: 46376905
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | errors: (none)
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | pilot state: finished 
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | transexitcode: 0
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | exeerrorcode: 0
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | exeerrordiag: 
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | exitcode: 0
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | exitmsg: OK
[2025-10-06 19:23:25] 2025-10-06 23:22:15,459 | INFO     | cpuconsumptiontime: 28521 s
[2025-10-06 19:23:25] 2025-10-06 23:22:15,460 | INFO     | nevents: 400
[2025-10-06 19:23:25] 2025-10-06 23:22:15,460 | INFO     | neventsw: 0
[2025-10-06 19:23:25] 2025-10-06 23:22:15,460 | INFO     | pid: 3429309
[2025-10-06 19:23:25] 2025-10-06 23:22:15,460 | INFO     | pgrp: 3429309
[2025-10-06 19:23:25] 2025-10-06 23:22:15,460 | INFO     | corecount: 8
[2025-10-06 19:23:25] 2025-10-06 23:22:15,460 | INFO     | event service: False
[2025-10-06 19:23:25] 2025-10-06 23:22:15,460 | INFO     | sizes: {0: 2348645, 1: 2348844, 12: 2348844, 19: 2349134, 22: 2349162, 11837: 2379220, 11840: 2388218, 11844: 2388274, 11861: 2388468}
[2025-10-06 19:23:25] 2025-10-06 23:22:15,460 | INFO     | --------------------------------------------------
[2025-10-06 19:23:25] 2025-10-06 23:22:15,460 | INFO     | 
[2025-10-06 19:23:25] 2025-10-06 23:22:15,460 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-06 19:23:25] 2025-10-06 23:22:15,725 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,725 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 19:23:25] 2025-10-06 23:22:15,726 | INFO     | job 6829875876 has completed (purged errors)
[2025-10-06 19:23:25] 2025-10-06 23:22:15,727 | INFO     | overall cleanup function is called
[2025-10-06 19:23:25] 2025-10-06 23:22:16,766 | INFO     | --- collectZombieJob: --- 10, [3429309]
[2025-10-06 19:23:25] 2025-10-06 23:22:16,766 | INFO     | zombie collector waiting for pid 3429309
[2025-10-06 19:23:25] 2025-10-06 23:22:16,766 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 19:23:25] 2025-10-06 23:22:16,766 | INFO     | collected zombie processes
[2025-10-06 19:23:25] 2025-10-06 23:22:16,766 | INFO     | will attempt to kill all subprocesses of pid=3429309
[2025-10-06 19:23:25] 2025-10-06 23:22:17,699 | INFO     | process IDs to be killed: [3429309] (in reverse order)
[2025-10-06 19:23:25] 2025-10-06 23:22:18,097 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 19:23:25] 2025-10-06 23:22:18,097 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 19:23:25] 2025-10-06 23:22:18,111 | INFO     | did not find any defunct processes belonging to 3429309
[2025-10-06 19:23:25] 2025-10-06 23:22:18,128 | INFO     | did not find any defunct processes belonging to 3429309
[2025-10-06 19:23:25] 2025-10-06 23:22:18,129 | INFO     | ready for new job
[2025-10-06 19:23:25] 2025-10-06 23:22:18,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 19:23:25] 2025-10-06 23:22:18,131 | INFO     | ***************************************
[2025-10-06 19:23:25] 2025-10-06 23:22:18,131 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 19:23:25] 2025-10-06 23:22:18,131 | INFO     | ***************************************
[2025-10-06 19:23:25] 2025-10-06 23:22:18,131 | INFO     | 
[2025-10-06 19:23:25] 2025-10-06 23:22:18,147 | INFO     | architecture information:
[2025-10-06 19:23:25] 2025-10-06 23:22:18,148 | INFO     | executing command: cat /etc/os-release
[2025-10-06 19:23:25] 2025-10-06 23:22:18,179 | INFO     | cat /etc/os-release:
[2025-10-06 19:23:25] NAME="CentOS Linux"
[2025-10-06 19:23:25] VERSION="7 (Core)"
[2025-10-06 19:23:25] ID="centos"
[2025-10-06 19:23:25] ID_LIKE="rhel fedora"
[2025-10-06 19:23:25] VERSION_ID="7"
[2025-10-06 19:23:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 19:23:25] ANSI_COLOR="0;31"
[2025-10-06 19:23:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 19:23:25] HOME_URL="https://www.centos.org/"
[2025-10-06 19:23:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 19:23:25] 
[2025-10-06 19:23:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 19:23:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 19:23:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 19:23:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 19:23:25] 
[2025-10-06 19:23:25] 2025-10-06 23:22:18,179 | INFO     | ***************************************
[2025-10-06 19:23:25] 2025-10-06 23:22:18,683 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-06 19:23:25] 2025-10-06 23:22:18,865 | INFO     | sufficient remaining disk space (85046853632 B)
[2025-10-06 19:23:25] 2025-10-06 23:22:18,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 19:23:25] 2025-10-06 23:22:18,865 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 19:23:25] 2025-10-06 23:22:18,865 | INFO     | update_server=False
[2025-10-06 19:23:25] 2025-10-06 23:22:18,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 19:23:25] 2025-10-06 23:22:19,079 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-06 19:23:25] 2025-10-06 23:22:19,083 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-06 19:23:25] 2025-10-06 23:22:19,083 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 19:23:25] 2025-10-06 23:22:19,083 | INFO     | will abort loop
[2025-10-06 19:23:25] 2025-10-06 23:22:19,383 | INFO     | all job control threads have been joined
[2025-10-06 19:23:25] 2025-10-06 23:22:19,594 | INFO     | all payload control threads have been joined
[2025-10-06 19:23:25] 2025-10-06 23:22:19,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 19:23:25] 2025-10-06 23:22:19,872 | INFO     | [job] retrieve thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:19,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:19,949 | INFO     | all data control threads have been joined
[2025-10-06 19:23:25] 2025-10-06 23:22:20,089 | INFO     | [job] job monitor thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:20,250 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:20,389 | INFO     | [job] control thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:20,413 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:20,413 | INFO     | [data] copytool_in thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:20,489 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 19:23:25] 2025-10-06 23:22:20,609 | INFO     | [payload] control thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:20,619 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:20,799 | INFO     | [payload] failed_post thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:20,961 | INFO     | [data] control thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:21,065 | INFO     | [job] validate thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:21,355 | INFO     | [payload] validate_post thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:21,495 | INFO     | [job] queue monitor thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:21,768 | INFO     | [data] copytool_out thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:21,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 19:23:25] 2025-10-06 23:22:25,927 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 19:23:25] 2025-10-06 23:22:48,574 | INFO     | PID=3420225 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 19:23:25] 2025-10-06 23:22:48,574 | INFO     | .. there are 17 such processes running
[2025-10-06 19:23:25] 2025-10-06 23:22:48,574 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 19:23:25] 2025-10-06 23:22:48,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 19:23:25] 2025-10-06 23:22:48,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 19:23:25] 2025-10-06 23:23:18,878 | INFO     | [monitor] cgroup control has ended
[2025-10-06 19:23:25] 2025-10-06 23:23:19,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139906409887552)>', '<ExcThread(monitor, started 139905917241088)>']
[2025-10-06 19:23:25] 2025-10-06 23:23:19,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 19:23:25] 2025-10-06 23:23:19,773 | INFO     | [monitor] control thread has ended
[2025-10-06 19:23:25] 2025-10-06 23:23:24,652 | INFO     | all workflow threads have been joined
[2025-10-06 19:23:25] 2025-10-06 23:23:24,652 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 19:23:25] 2025-10-06 23:23:24,652 | INFO     | traces error code: 0
[2025-10-06 19:23:25] 2025-10-06 23:23:24,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 19:23:25] 2025-10-06 23:23:25,073 [wrapper] ==== pilot stdout END ====
[2025-10-06 19:23:25] 2025-10-06 23:23:25,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 19:23:25] 2025-10-06 23:23:25,160 [wrapper] pilotpid: 3420225
[2025-10-06 19:23:25] 2025-10-06 23:23:25,231 [wrapper] Pilot exit status: 0
[2025-10-06 19:23:25] 2025-10-06 23:23:25,327 [wrapper] pandaids: 6829875876
[2025-10-06 19:23:25] 2025-10-06 23:23:25,410 [wrapper] cleanup supervisor_pilot 3900997 3420226
[2025-10-06 19:23:25] 2025-10-06 23:23:25,414 [wrapper] Test setup, not cleaning
[2025-10-06 19:23:25] 2025-10-06 23:23:25,416 [wrapper] apfmon messages muted
[2025-10-06 19:23:25] 2025-10-06 23:23:25,426 [wrapper] ==== wrapper stdout END ====
[2025-10-06 19:23:25] 2025-10-06 23:23:25,429 [wrapper] ==== wrapper stderr END ====
[2025-10-06 19:23:25]  *** Error codes and diagnostics ***
[2025-10-06 19:23:25]     "exeErrorCode": 0,
[2025-10-06 19:23:25]     "exeErrorDiag": "",
[2025-10-06 19:23:25]     "pilotErrorCode": 0,
[2025-10-06 19:23:25]     "pilotErrorDiag": "",
[2025-10-06 19:23:25]  *** Listing of results directory ***
[2025-10-06 19:23:25] total 389716
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 13:03 pilot3.tar.gz
[2025-10-06 19:23:25] -rwx------. 1 boincer umatlas     36292 Oct  4 13:17 runpilot2-wrapper.sh
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 13:17 queuedata.json
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas       100 Oct  6 16:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 19:23:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 16:03 run_atlas
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas       105 Oct  6 16:03 job.xml
[2025-10-06 19:23:25] -rw-r--r--. 2 boincer umatlas 215536830 Oct  6 16:03 EVNT.46376901._002312.pool.root.1
[2025-10-06 19:23:25] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 16:03 start_atlas.sh
[2025-10-06 19:23:25] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 16:03 shared
[2025-10-06 19:23:25] -rw-r--r--. 2 boincer umatlas    565602 Oct  6 16:03 input.tar.gz
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas         0 Oct  6 16:03 boinc_lockfile
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas      2519 Oct  6 16:03 pandaJob.out
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas    975026 Oct  6 16:03 agis_schedconf.cvmfs.json
[2025-10-06 19:23:25] drwx------. 4 boincer umatlas      4096 Oct  6 16:03 pilot3
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas      6897 Oct  6 19:21 init_data.xml
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas 175565949 Oct  6 19:21 HITS.46376905._063899.pool.root.1
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas       530 Oct  6 19:21 boinc_task_state.xml
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas      1034 Oct  6 19:21 memory_monitor_summary.json
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas   1560401 Oct  6 19:21 agis_ddmendpoints.agis.ALL.json
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas    430267 Oct  6 19:21 log.46376905._063899.job.log.tgz.1
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas        95 Oct  6 19:22 pilot_heartbeat.json
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas      7784 Oct  6 19:22 heartbeat.json
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas      8192 Oct  6 19:23 boinc_mmap_file
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas        28 Oct  6 19:23 wrapper_checkpoint.txt
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas      5010 Oct  6 19:23 pilotlog.txt
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas   1603756 Oct  6 19:23 log.46376905._063899.job.log.1
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas       357 Oct  6 19:23 output.list
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas       620 Oct  6 19:23 runtime_log
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas   2058240 Oct  6 19:23 result.tar.gz
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas      8704 Oct  6 19:23 runtime_log.err
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas       656 Oct  6 19:23 mE5KDmD4KP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDxDMDmdhOmvn.diag
[2025-10-06 19:23:25] -rw-r--r--. 1 boincer umatlas     21043 Oct  6 19:23 stderr.txt
[2025-10-06 19:23:25] HITS file was successfully produced:
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas 175565949 Oct  6 19:21 shared/HITS.pool.root.1
[2025-10-06 19:23:25]  *** Contents of shared directory: ***
[2025-10-06 19:23:25] total 384532
[2025-10-06 19:23:25] -rw-r--r--. 2 boincer umatlas 215536830 Oct  6 16:03 ATLAS.root_0
[2025-10-06 19:23:25] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 16:03 start_atlas.sh
[2025-10-06 19:23:25] -rw-r--r--. 2 boincer umatlas    565602 Oct  6 16:03 input.tar.gz
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas 175565949 Oct  6 19:21 HITS.pool.root.1
[2025-10-06 19:23:25] -rw-------. 1 boincer umatlas   2058240 Oct  6 19:23 result.tar.gz
19:23:26 (3416260): run_atlas exited; CPU time 28688.811046
19:23:26 (3416260): called boinc_finish(0)

</stderr_txt>
]]>

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