Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:04:37 (1102554): wrapper (7.7.26015): starting
14:04:37 (1102554): wrapper: running run_atlas (--nthreads 9)
[2025-10-06 14:04:37] Arguments: --nthreads 9
[2025-10-06 14:04:37] Threads: 9
[2025-10-06 14:04:37] Checking for CVMFS
[2025-10-06 14:04:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 14:04:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 14:04:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 14:04:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 14:04:39] 2.13.2.0 1908877 90812 514164 151406 3 747 30352559 32947200 36536 16776704 0 240883232 99.622 238950991 20792 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-06 14:04:39] CVMFS is ok
[2025-10-06 14:04:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 14:04:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 14:04:39] Further information can be found at the LHC@home message board.
[2025-10-06 14:04:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 14:04:39] Checking for apptainer binary...
[2025-10-06 14:04:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 14:04:39] Running /usr/bin/apptainer --version
[2025-10-06 14:04:39] apptainer version 1.4.2-1.el9
[2025-10-06 14:04:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 14:04:40] c6-6-8-1.aglt2.org
[2025-10-06 14:04:40] apptainer works
[2025-10-06 14:04:40] Set ATHENA_PROC_NUMBER=9
[2025-10-06 14:04:40] Set ATHENA_CORE_NUMBER=9
[2025-10-06 14:04:40] Starting ATLAS job with PandaID=6829878336
[2025-10-06 14:04:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 18:46:23]  *** The last 200 lines of the pilot log: ***
[2025-10-06 18:46:23] 2025-10-06 22:45:27,983 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2601.7559583333336
[2025-10-06 18:46:23] 2025-10-06 22:45:28,122 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6829878336/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 18:46:23] 2025-10-06 22:45:28,133 | INFO     | extracted standard info from prmon json
[2025-10-06 18:46:23] 2025-10-06 22:45:28,133 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 18:46:23] 2025-10-06 22:45:28,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 18:46:23] 2025-10-06 22:45:28,134 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 18:46:23] 2025-10-06 22:45:28,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 18:46:23] 2025-10-06 22:45:28,149 | INFO     | fitting pss+swap vs Time
[2025-10-06 18:46:23] 2025-10-06 22:45:28,150 | INFO     | sum of square deviations: 6309271494.710632
[2025-10-06 18:46:23] 2025-10-06 22:45:28,164 | INFO     | sum of deviations: 44359616356.33332
[2025-10-06 18:46:23] 2025-10-06 22:45:28,164 | INFO     | mean x: 1759782370.4249084
[2025-10-06 18:46:23] 2025-10-06 22:45:28,164 | INFO     | mean y: 2162875.3333333335
[2025-10-06 18:46:23] 2025-10-06 22:45:28,165 | INFO     | -- intersect: -12370623885.88498
[2025-10-06 18:46:23] 2025-10-06 22:45:28,165 | INFO     | intersect: -12370623885.88498
[2025-10-06 18:46:23] 2025-10-06 22:45:28,165 | INFO     | chi2: 3.2517797110760482
[2025-10-06 18:46:23] 2025-10-06 22:45:28,166 | INFO     | sum of square deviations: 5968932302.507436
[2025-10-06 18:46:23] 2025-10-06 22:45:28,180 | INFO     | sum of deviations: 63372018265.02982
[2025-10-06 18:46:23] 2025-10-06 22:45:28,181 | INFO     | mean x: 1759782217.925373
[2025-10-06 18:46:23] 2025-10-06 22:45:28,181 | INFO     | mean y: 2171286.7014925373
[2025-10-06 18:46:23] 2025-10-06 22:45:28,181 | INFO     | -- intersect: -18681396427.744453
[2025-10-06 18:46:23] 2025-10-06 22:45:28,181 | INFO     | intersect: -18681396427.744453
[2025-10-06 18:46:23] 2025-10-06 22:45:28,182 | INFO     | chi2: 2.458979341593965
[2025-10-06 18:46:23] 2025-10-06 22:45:28,182 | INFO     | current chi2=2.458979341593965 (change=24.380506673981838 %)
[2025-10-06 18:46:23] 2025-10-06 22:45:28,182 | INFO     | right removable region: 267
[2025-10-06 18:46:23] 2025-10-06 22:45:28,182 | INFO     | sum of square deviations: 5968894848.791025
[2025-10-06 18:46:23] 2025-10-06 22:45:28,219 | INFO     | sum of deviations: -8780288992.014925
[2025-10-06 18:46:23] 2025-10-06 22:45:28,220 | INFO     | mean x: 1759782522.9328358
[2025-10-06 18:46:23] 2025-10-06 22:45:28,220 | INFO     | mean y: 2186581.8880597013
[2025-10-06 18:46:23] 2025-10-06 22:45:28,220 | INFO     | -- intersect: 2590839842.814083
[2025-10-06 18:46:23] 2025-10-06 22:45:28,220 | INFO     | intersect: 2590839842.814083
[2025-10-06 18:46:23] 2025-10-06 22:45:28,220 | INFO     | chi2: 1.132930702323528
[2025-10-06 18:46:23] 2025-10-06 22:45:28,220 | INFO     | current chi2=1.132930702323528 (change=65.15967245675972 %)
[2025-10-06 18:46:23] 2025-10-06 22:45:28,221 | INFO     | sum of square deviations: 5640983552.836519
[2025-10-06 18:46:23] 2025-10-06 22:45:28,269 | INFO     | sum of deviations: -21455386923.57794
[2025-10-06 18:46:23] 2025-10-06 22:45:28,269 | INFO     | mean x: 1759782675.4410646
[2025-10-06 18:46:23] 2025-10-06 22:45:28,269 | INFO     | mean y: 2192440.349809886
[2025-10-06 18:46:23] 2025-10-06 22:45:28,269 | INFO     | -- intersect: 6695496515.666877
[2025-10-06 18:46:23] 2025-10-06 22:45:28,269 | INFO     | intersect: 6695496515.666877
[2025-10-06 18:46:23] 2025-10-06 22:45:28,270 | INFO     | chi2: 0.9848876198059695
[2025-10-06 18:46:23] 2025-10-06 22:45:28,270 | INFO     | current chi2=0.9848876198059695 (change=13.067267240082458 %)
[2025-10-06 18:46:23] 2025-10-06 22:45:28,270 | INFO     | left removable region: 20
[2025-10-06 18:46:23] 2025-10-06 22:45:28,270 | INFO     | sum of square deviations: 4672780081.214608
[2025-10-06 18:46:23] 2025-10-06 22:45:28,292 | INFO     | sum of deviations: -11943758020.502026
[2025-10-06 18:46:23] 2025-10-06 22:45:28,292 | INFO     | mean x: 1759782797.4534414
[2025-10-06 18:46:23] 2025-10-06 22:45:28,293 | INFO     | mean y: 2206974.825910931
[2025-10-06 18:46:23] 2025-10-06 22:45:28,349 | INFO     | -- intersect: 4500261566.764391
[2025-10-06 18:46:23] 2025-10-06 22:45:28,349 | INFO     | intersect: 4500261566.764391
[2025-10-06 18:46:23] 2025-10-06 22:45:28,350 | INFO     | chi2: 0.06504474450335435
[2025-10-06 18:46:23] 2025-10-06 22:45:28,350 | INFO     | -- intersect: 4500261566.764391
[2025-10-06 18:46:23] 2025-10-06 22:45:28,351 | INFO     | current memory leak: -2.56 B/s (using 247 data points, chi2=0.07)
[2025-10-06 18:46:23] 2025-10-06 22:45:28,351 | INFO     | could have reported an average CPU frequency of 2636 MHz (13 samples)
[2025-10-06 18:46:23] 2025-10-06 22:45:28,352 | INFO     | ..............................
[2025-10-06 18:46:23] 2025-10-06 22:45:28,352 | INFO     | . Timing measurements:
[2025-10-06 18:46:23] 2025-10-06 22:45:28,352 | INFO     | . get job = 1 s
[2025-10-06 18:46:23] 2025-10-06 22:45:28,352 | INFO     | . initial setup = 5 s
[2025-10-06 18:46:23] 2025-10-06 22:45:28,352 | INFO     | . payload setup = 32 s
[2025-10-06 18:46:23] 2025-10-06 22:45:28,352 | INFO     | . stage-in = 0 s
[2025-10-06 18:46:23] 2025-10-06 22:45:28,352 | INFO     | . payload execution = 16643 s
[2025-10-06 18:46:23] 2025-10-06 22:45:28,352 | INFO     | . stage-out = 5 s
[2025-10-06 18:46:23] 2025-10-06 22:45:28,352 | INFO     | . log creation = 0 s
[2025-10-06 18:46:23] 2025-10-06 22:45:28,352 | INFO     | ..............................
[2025-10-06 18:46:23] 2025-10-06 22:45:28,750 | INFO     | PID=1108570 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 18:46:23] 2025-10-06 22:45:28,751 | INFO     | .. there are 36 such processes running
[2025-10-06 18:46:23] 2025-10-06 22:45:29,498 | INFO     | 
[2025-10-06 18:46:23] 2025-10-06 22:45:29,498 | INFO     | job summary report
[2025-10-06 18:46:23] 2025-10-06 22:45:29,498 | INFO     | --------------------------------------------------
[2025-10-06 18:46:23] 2025-10-06 22:45:29,498 | INFO     | PanDA job id: 6829878336
[2025-10-06 18:46:23] 2025-10-06 22:45:29,498 | INFO     | task id: 46376905
[2025-10-06 18:46:23] 2025-10-06 22:45:29,498 | INFO     | errors: (none)
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | pilot state: finished 
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | transexitcode: 0
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | exeerrorcode: 0
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | exeerrordiag: 
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | exitcode: 0
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | exitmsg: OK
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | cpuconsumptiontime: 40513 s
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | nevents: 400
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | neventsw: 0
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | pid: 1124381
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | pgrp: 1124381
[2025-10-06 18:46:23] 2025-10-06 22:45:29,499 | INFO     | corecount: 9
[2025-10-06 18:46:23] 2025-10-06 22:45:29,500 | INFO     | event service: False
[2025-10-06 18:46:23] 2025-10-06 22:45:29,500 | INFO     | sizes: {0: 2348645, 2: 2348645, 4: 2348872, 15: 2348872, 26: 2348900, 34: 2349190, 38: 2349346, 16679: 2380741, 16686: 2389739, 16687: 2389795, 16716: 2389989}
[2025-10-06 18:46:23] 2025-10-06 22:45:29,500 | INFO     | --------------------------------------------------
[2025-10-06 18:46:23] 2025-10-06 22:45:29,500 | INFO     | 
[2025-10-06 18:46:23] 2025-10-06 22:45:29,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-06 18:46:23] 2025-10-06 22:45:29,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,685 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 18:46:23] 2025-10-06 22:45:29,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,687 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 18:46:23] 2025-10-06 22:45:29,687 | INFO     | job 6829878336 has completed (purged errors)
[2025-10-06 18:46:23] 2025-10-06 22:45:29,687 | INFO     | overall cleanup function is called
[2025-10-06 18:46:23] 2025-10-06 22:45:30,726 | INFO     | --- collectZombieJob: --- 10, [1124381]
[2025-10-06 18:46:23] 2025-10-06 22:45:30,726 | INFO     | zombie collector waiting for pid 1124381
[2025-10-06 18:46:23] 2025-10-06 22:45:30,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 18:46:23] 2025-10-06 22:45:30,726 | INFO     | collected zombie processes
[2025-10-06 18:46:23] 2025-10-06 22:45:30,726 | INFO     | will attempt to kill all subprocesses of pid=1124381
[2025-10-06 18:46:23] 2025-10-06 22:45:33,685 | INFO     | process IDs to be killed: [1124381] (in reverse order)
[2025-10-06 18:46:23] 2025-10-06 22:45:34,127 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 18:46:23] 2025-10-06 22:45:34,127 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 18:46:23] 2025-10-06 22:45:34,161 | INFO     | did not find any defunct processes belonging to 1124381
[2025-10-06 18:46:23] 2025-10-06 22:45:34,199 | INFO     | did not find any defunct processes belonging to 1124381
[2025-10-06 18:46:23] 2025-10-06 22:45:34,200 | INFO     | ready for new job
[2025-10-06 18:46:23] 2025-10-06 22:45:34,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 18:46:23] 2025-10-06 22:45:34,206 | INFO     | ***************************************
[2025-10-06 18:46:23] 2025-10-06 22:45:34,207 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 18:46:23] 2025-10-06 22:45:34,207 | INFO     | ***************************************
[2025-10-06 18:46:23] 2025-10-06 22:45:34,207 | INFO     | 
[2025-10-06 18:46:23] 2025-10-06 22:45:34,217 | INFO     | architecture information:
[2025-10-06 18:46:23] 2025-10-06 22:45:34,225 | INFO     | executing command: cat /etc/os-release
[2025-10-06 18:46:23] 2025-10-06 22:45:34,269 | INFO     | cat /etc/os-release:
[2025-10-06 18:46:23] NAME="CentOS Linux"
[2025-10-06 18:46:23] VERSION="7 (Core)"
[2025-10-06 18:46:23] ID="centos"
[2025-10-06 18:46:23] ID_LIKE="rhel fedora"
[2025-10-06 18:46:23] VERSION_ID="7"
[2025-10-06 18:46:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 18:46:23] ANSI_COLOR="0;31"
[2025-10-06 18:46:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 18:46:23] HOME_URL="https://www.centos.org/"
[2025-10-06 18:46:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 18:46:23] 
[2025-10-06 18:46:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 18:46:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 18:46:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 18:46:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 18:46:23] 
[2025-10-06 18:46:23] 2025-10-06 22:45:34,269 | INFO     | ***************************************
[2025-10-06 18:46:23] 2025-10-06 22:45:34,773 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-06 18:46:23] 2025-10-06 22:45:34,829 | INFO     | sufficient remaining disk space (74555850752 B)
[2025-10-06 18:46:23] 2025-10-06 22:45:34,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 18:46:23] 2025-10-06 22:45:34,830 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 18:46:23] 2025-10-06 22:45:34,830 | INFO     | update_server=False
[2025-10-06 18:46:23] 2025-10-06 22:45:34,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 18:46:23] 2025-10-06 22:45:34,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 18:46:23] 2025-10-06 22:45:34,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 18:46:23] 2025-10-06 22:45:35,266 | INFO     | all payload control threads have been joined
[2025-10-06 18:46:23] 2025-10-06 22:45:35,286 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-06 18:46:23] 2025-10-06 22:45:35,286 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-06 18:46:23] 2025-10-06 22:45:35,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 18:46:23] 2025-10-06 22:45:35,286 | INFO     | will abort loop
[2025-10-06 18:46:23] 2025-10-06 22:45:35,558 | INFO     | all job control threads have been joined
[2025-10-06 18:46:23] 2025-10-06 22:45:35,835 | INFO     | [job] retrieve thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:35,836 | INFO     | [job] queue monitor thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:35,861 | INFO     | all data control threads have been joined
[2025-10-06 18:46:23] 2025-10-06 22:45:36,272 | INFO     | [payload] control thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:36,294 | INFO     | [job] job monitor thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:36,307 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:36,330 | INFO     | [payload] validate_post thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:36,439 | INFO     | [payload] failed_post thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:36,567 | INFO     | [job] control thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:36,675 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:36,867 | INFO     | [data] control thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:36,874 | INFO     | [data] copytool_out thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:36,940 | INFO     | [job] validate thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:37,083 | INFO     | [data] copytool_in thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:37,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:37,238 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:45:37,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 18:46:23] 2025-10-06 22:45:41,767 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 18:46:23] 2025-10-06 22:46:04,629 | INFO     | PID=1108570 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 18:46:23] 2025-10-06 22:46:04,629 | INFO     | .. there are 37 such processes running
[2025-10-06 18:46:23] 2025-10-06 22:46:04,652 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 18:46:23] 2025-10-06 22:46:04,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 18:46:23] 2025-10-06 22:46:04,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 18:46:23] 2025-10-06 22:46:15,285 | INFO     | [monitor] cgroup control has ended
[2025-10-06 18:46:23] 2025-10-06 22:46:16,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990735836992)>', '<ExcThread(monitor, started 139990013040384)>']
[2025-10-06 18:46:23] 2025-10-06 22:46:16,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 18:46:23] 2025-10-06 22:46:16,743 | INFO     | [monitor] control thread has ended
[2025-10-06 18:46:23] 2025-10-06 22:46:21,455 | INFO     | all workflow threads have been joined
[2025-10-06 18:46:23] 2025-10-06 22:46:21,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 18:46:23] 2025-10-06 22:46:21,455 | INFO     | traces error code: 0
[2025-10-06 18:46:23] 2025-10-06 22:46:21,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 18:46:23] 2025-10-06 22:46:22,837 [wrapper] ==== pilot stdout END ====
[2025-10-06 18:46:23] 2025-10-06 22:46:22,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 18:46:23] 2025-10-06 22:46:22,886 [wrapper] pilotpid: 1108570
[2025-10-06 18:46:23] 2025-10-06 22:46:22,920 [wrapper] Pilot exit status: 0
[2025-10-06 18:46:23] 2025-10-06 22:46:23,052 [wrapper] pandaids: 6829878336
[2025-10-06 18:46:23] 2025-10-06 22:46:23,159 [wrapper] cleanup supervisor_pilot 2055608 1108571
[2025-10-06 18:46:23] 2025-10-06 22:46:23,171 [wrapper] Test setup, not cleaning
[2025-10-06 18:46:23] 2025-10-06 22:46:23,174 [wrapper] apfmon messages muted
[2025-10-06 18:46:23] 2025-10-06 22:46:23,177 [wrapper] ==== wrapper stdout END ====
[2025-10-06 18:46:23] 2025-10-06 22:46:23,179 [wrapper] ==== wrapper stderr END ====
[2025-10-06 18:46:23]  *** Error codes and diagnostics ***
[2025-10-06 18:46:23]     "exeErrorCode": 0,
[2025-10-06 18:46:23]     "exeErrorDiag": "",
[2025-10-06 18:46:23]     "pilotErrorCode": 0,
[2025-10-06 18:46:23]     "pilotErrorDiag": "",
[2025-10-06 18:46:23]  *** Listing of results directory ***
[2025-10-06 18:46:23] total 393452
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas    552446 Oct  4 14:03 pilot3.tar.gz
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas      5112 Oct  4 14:20 queuedata.json
[2025-10-06 18:46:23] -rwx------ 1 boincer umatlas     36292 Oct  4 14:20 runpilot2-wrapper.sh
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas       100 Oct  6 14:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 18:46:23] -rwxr-xr-x 1 boincer umatlas      7986 Oct  6 14:04 run_atlas
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas       105 Oct  6 14:04 job.xml
[2025-10-06 18:46:23] -rw-r--r-- 2 boincer umatlas 216383599 Oct  6 14:04 EVNT.46376901._002359.pool.root.1
[2025-10-06 18:46:23] -rw-r--r-- 2 boincer umatlas    565603 Oct  6 14:04 input.tar.gz
[2025-10-06 18:46:23] -rw-r--r-- 2 boincer umatlas     15120 Oct  6 14:04 start_atlas.sh
[2025-10-06 18:46:23] drwxrwx--x 2 boincer umatlas      4096 Oct  6 14:04 shared
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas         0 Oct  6 14:04 boinc_lockfile
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas      2519 Oct  6 14:04 pandaJob.out
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas    975018 Oct  6 14:05 agis_schedconf.cvmfs.json
[2025-10-06 18:46:23] drwx------ 4 boincer umatlas      4096 Oct  6 14:05 pilot3
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas 177742910 Oct  6 18:43 HITS.46376905._065066.pool.root.1
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas       531 Oct  6 18:44 boinc_task_state.xml
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas      1044 Oct  6 18:44 memory_monitor_summary.json
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas   1560401 Oct  6 18:44 agis_ddmendpoints.agis.ALL.json
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas    486462 Oct  6 18:44 log.46376905._065066.job.log.tgz.1
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas      7827 Oct  6 18:45 heartbeat.json
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas      6857 Oct  6 18:45 init_data.xml
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas        95 Oct  6 18:46 pilot_heartbeat.json
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas      8192 Oct  6 18:46 boinc_mmap_file
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas        28 Oct  6 18:46 wrapper_checkpoint.txt
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas      5010 Oct  6 18:46 pilotlog.txt
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas   1953040 Oct  6 18:46 log.46376905._065066.job.log.1
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas       357 Oct  6 18:46 output.list
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas       620 Oct  6 18:46 runtime_log
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas   2457600 Oct  6 18:46 result.tar.gz
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas      8704 Oct  6 18:46 runtime_log.err
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas       656 Oct  6 18:46 KzKKDmy2LP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmm6DMDmzrLiAn.diag
[2025-10-06 18:46:23] -rw-r--r-- 1 boincer umatlas     21323 Oct  6 18:46 stderr.txt
[2025-10-06 18:46:23] HITS file was successfully produced:
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas 177742910 Oct  6 18:43 shared/HITS.pool.root.1
[2025-10-06 18:46:23]  *** Contents of shared directory: ***
[2025-10-06 18:46:23] total 387876
[2025-10-06 18:46:23] -rw-r--r-- 2 boincer umatlas 216383599 Oct  6 14:04 ATLAS.root_0
[2025-10-06 18:46:23] -rw-r--r-- 2 boincer umatlas    565603 Oct  6 14:04 input.tar.gz
[2025-10-06 18:46:23] -rw-r--r-- 2 boincer umatlas     15120 Oct  6 14:04 start_atlas.sh
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas 177742910 Oct  6 18:43 HITS.pool.root.1
[2025-10-06 18:46:23] -rw------- 1 boincer umatlas   2457600 Oct  6 18:46 result.tar.gz
18:46:24 (1102554): run_atlas exited; CPU time 41350.684132
18:46:24 (1102554): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN