Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:24:44 (1359382): wrapper (7.7.26015): starting
13:24:44 (1359382): wrapper: running run_atlas (--nthreads 9)
[2025-10-06 13:24:44] Arguments: --nthreads 9
[2025-10-06 13:24:44] Threads: 9
[2025-10-06 13:24:44] Checking for CVMFS
[2025-10-06 13:24:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 13:24:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 13:24:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 13:24:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 13:24:46] 2.13.2.0 1619052 115491 375452 151406 1 174 30342924 40960000 24673 16776704 1 276048806 99.742 182689739 36476 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-06 13:24:46] CVMFS is ok
[2025-10-06 13:24:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 13:24:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 13:24:46] Further information can be found at the LHC@home message board.
[2025-10-06 13:24:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 13:24:46] Checking for apptainer binary...
[2025-10-06 13:24:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 13:24:46] Running /usr/bin/apptainer --version
[2025-10-06 13:24:46] apptainer version 1.4.2-1.el9
[2025-10-06 13:24:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 13:24:46] c-212-15.aglt2.org
[2025-10-06 13:24:46] apptainer works
[2025-10-06 13:24:47] Set ATHENA_PROC_NUMBER=9
[2025-10-06 13:24:47] Set ATHENA_CORE_NUMBER=9
[2025-10-06 13:24:47] Starting ATLAS job with PandaID=6832633700
[2025-10-06 13:24:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 14:42:48]  *** The last 200 lines of the pilot log: ***
[2025-10-06 14:42:48] 2025-10-06 18:41:41,992 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-06 14:42:48] 2025-10-06 18:41:41,993 | INFO     | summary of transferred files:
[2025-10-06 14:42:48] 2025-10-06 18:41:41,993 | INFO     |  -- lfn=log.46376905._109269.job.log.tgz.1, status_code=0, status=transferred
[2025-10-06 14:42:48] 2025-10-06 18:41:41,993 | INFO     | stage-out finished correctly
[2025-10-06 14:42:48] 2025-10-06 18:41:42,064 | INFO     | time since job start (4568s) is within the limit (172800.0s)
[2025-10-06 14:42:48] 2025-10-06 18:41:42,187 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-06 14:42:48] 2025-10-06 18:41:42,608 | INFO     | job 6832633700 has state=finished
[2025-10-06 14:42:48] 2025-10-06 18:41:42,608 | INFO     | preparing for final server update for job 6832633700 in state='finished'
[2025-10-06 14:42:48] 2025-10-06 18:41:42,609 | INFO     | this job has now completed (state=finished)
[2025-10-06 14:42:48] 2025-10-06 18:41:42,609 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-06 14:42:48] 2025-10-06 18:41:42,609 | INFO     | log transfer has been attempted: DONE
[2025-10-06 14:42:48] 2025-10-06 18:41:42,609 | INFO     | job 6832633700 has finished - writing final server update
[2025-10-06 14:42:48] 2025-10-06 18:41:42,609 | INFO     | total number of processed events: 400 (read)
[2025-10-06 14:42:48] 2025-10-06 18:41:42,610 | INFO     | executing command: lscpu
[2025-10-06 14:42:48] 2025-10-06 18:41:42,772 | INFO     | monitor loop #311: job 0:6832633700 is in state 'finished'
[2025-10-06 14:42:48] 2025-10-06 18:41:42,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 14:42:48] 2025-10-06 18:41:42,774 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-06 14:42:48] 2025-10-06 18:41:44,071 | INFO     | time since job start (4570s) is within the limit (172800.0s)
[2025-10-06 14:42:48] 2025-10-06 18:41:45,278 | INFO     | monitor loop #312: job 0:6832633700 is in state 'finished'
[2025-10-06 14:42:48] 2025-10-06 18:41:45,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 14:42:48] 2025-10-06 18:41:46,078 | INFO     | time since job start (4572s) is within the limit (172800.0s)
[2025-10-06 14:42:48] 2025-10-06 18:41:47,783 | INFO     | monitor loop #313: job 0:6832633700 is in state 'finished'
[2025-10-06 14:42:48] 2025-10-06 18:41:47,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 14:42:48] 2025-10-06 18:41:48,084 | INFO     | time since job start (4574s) is within the limit (172800.0s)
[2025-10-06 14:42:48] 2025-10-06 18:41:50,094 | INFO     | time since job start (4576s) is within the limit (172800.0s)
[2025-10-06 14:42:48] 2025-10-06 18:41:50,299 | INFO     | monitor loop #314: job 0:6832633700 is in state 'finished'
[2025-10-06 14:42:48] 2025-10-06 18:41:50,300 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 14:42:48] 2025-10-06 18:41:52,108 | INFO     | time since job start (4578s) is within the limit (172800.0s)
[2025-10-06 14:42:48] 2025-10-06 18:41:52,812 | INFO     | monitor loop #315: job 0:6832633700 is in state 'finished'
[2025-10-06 14:42:48] 2025-10-06 18:41:52,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 14:42:48] 2025-10-06 18:41:54,127 | INFO     | time since job start (4580s) is within the limit (172800.0s)
[2025-10-06 14:42:48] 2025-10-06 18:41:55,317 | INFO     | monitor loop #316: job 0:6832633700 is in state 'finished'
[2025-10-06 14:42:48] 2025-10-06 18:41:55,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 14:42:48] 2025-10-06 18:41:56,156 | INFO     | time since job start (4582s) is within the limit (172800.0s)
[2025-10-06 14:42:48] 2025-10-06 18:41:57,254 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-06 14:42:48] 2025-10-06 18:41:57,450 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3330.812697916667
[2025-10-06 14:42:48] 2025-10-06 18:41:57,568 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832633700/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 14:42:48] 2025-10-06 18:41:57,592 | INFO     | extracted standard info from prmon json
[2025-10-06 14:42:48] 2025-10-06 18:41:57,592 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 14:42:48] 2025-10-06 18:41:57,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 14:42:48] 2025-10-06 18:41:57,592 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 14:42:48] 2025-10-06 18:41:57,592 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 14:42:48] 2025-10-06 18:41:57,594 | INFO     | fitting pss+swap vs Time
[2025-10-06 14:42:48] 2025-10-06 18:41:57,594 | INFO     | sum of square deviations: 93247289.46268655
[2025-10-06 14:42:48] 2025-10-06 18:41:57,594 | INFO     | sum of deviations: -7356503586.820896
[2025-10-06 14:42:48] 2025-10-06 18:41:57,594 | INFO     | mean x: 1759773902.0895522
[2025-10-06 14:42:48] 2025-10-06 18:41:57,595 | INFO     | mean y: 2659113.970149254
[2025-10-06 14:42:48] 2025-10-06 18:41:57,595 | INFO     | -- intersect: 138835466987.66095
[2025-10-06 14:42:48] 2025-10-06 18:41:57,595 | INFO     | intersect: 138835466987.66095
[2025-10-06 14:42:48] 2025-10-06 18:41:57,595 | INFO     | chi2: 0.02640699644842396
[2025-10-06 14:42:48] 2025-10-06 18:41:57,595 | INFO     | -- intersect: 138835466987.66095
[2025-10-06 14:42:48] 2025-10-06 18:41:57,595 | INFO     | current memory leak: -78.89 B/s (using 67 data points, chi2=0.03)
[2025-10-06 14:42:48] 2025-10-06 18:41:57,650 | INFO     | could have reported an average CPU frequency of 3311 MHz (6 samples)
[2025-10-06 14:42:48] 2025-10-06 18:41:57,650 | INFO     | ..............................
[2025-10-06 14:42:48] 2025-10-06 18:41:57,650 | INFO     | . Timing measurements:
[2025-10-06 14:42:48] 2025-10-06 18:41:57,650 | INFO     | . get job = 0 s
[2025-10-06 14:42:48] 2025-10-06 18:41:57,650 | INFO     | . initial setup = 3 s
[2025-10-06 14:42:48] 2025-10-06 18:41:57,650 | INFO     | . payload setup = 9 s
[2025-10-06 14:42:48] 2025-10-06 18:41:57,650 | INFO     | . stage-in = 0 s
[2025-10-06 14:42:48] 2025-10-06 18:41:57,651 | INFO     | . payload execution = 4519 s
[2025-10-06 14:42:48] 2025-10-06 18:41:57,651 | INFO     | . stage-out = 1 s
[2025-10-06 14:42:48] 2025-10-06 18:41:57,651 | INFO     | . log creation = 0 s
[2025-10-06 14:42:48] 2025-10-06 18:41:57,651 | INFO     | ..............................
[2025-10-06 14:42:48] 2025-10-06 18:41:58,767 | INFO     | 
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | job summary report
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | --------------------------------------------------
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | PanDA job id: 6832633700
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | task id: 46376905
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | errors: (none)
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | pilot state: finished 
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | transexitcode: 0
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | exeerrorcode: 0
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | exeerrordiag: 
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | exitcode: 0
[2025-10-06 14:42:48] 2025-10-06 18:41:58,768 | INFO     | exitmsg: OK
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | cpuconsumptiontime: 26700 s
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | nevents: 400
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | neventsw: 0
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | pid: 1371697
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | pgrp: 1371697
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | corecount: 9
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | event service: False
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | sizes: {0: 2348766, 11: 2348766, 13: 2349056, 22: 2349112, 4533: 2375298, 4534: 2375297, 4537: 2384535, 4553: 2384673}
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | --------------------------------------------------
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | 
[2025-10-06 14:42:48] 2025-10-06 18:41:58,769 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-06 14:42:48] 2025-10-06 18:41:58,849 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,849 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,849 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,849 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 14:42:48] 2025-10-06 18:41:58,850 | INFO     | job 6832633700 has completed (purged errors)
[2025-10-06 14:42:48] 2025-10-06 18:41:58,851 | INFO     | overall cleanup function is called
[2025-10-06 14:42:48] 2025-10-06 18:41:59,080 | INFO     | PID=1364027 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 14:42:48] 2025-10-06 18:41:59,080 | INFO     | .. there are 23 such processes running
[2025-10-06 14:42:48] 2025-10-06 18:41:59,860 | INFO     | --- collectZombieJob: --- 10, [1371697]
[2025-10-06 14:42:48] 2025-10-06 18:41:59,861 | INFO     | zombie collector waiting for pid 1371697
[2025-10-06 14:42:48] 2025-10-06 18:41:59,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 14:42:48] 2025-10-06 18:41:59,861 | INFO     | collected zombie processes
[2025-10-06 14:42:48] 2025-10-06 18:41:59,861 | INFO     | will attempt to kill all subprocesses of pid=1371697
[2025-10-06 14:42:48] 2025-10-06 18:42:01,318 | INFO     | process IDs to be killed: [1371697] (in reverse order)
[2025-10-06 14:42:48] 2025-10-06 18:42:01,717 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 14:42:48] 2025-10-06 18:42:01,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 14:42:48] 2025-10-06 18:42:01,734 | INFO     | did not find any defunct processes belonging to 1371697
[2025-10-06 14:42:48] 2025-10-06 18:42:01,751 | INFO     | did not find any defunct processes belonging to 1371697
[2025-10-06 14:42:48] 2025-10-06 18:42:01,751 | INFO     | ready for new job
[2025-10-06 14:42:48] 2025-10-06 18:42:01,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 14:42:48] 2025-10-06 18:42:01,753 | INFO     | ***************************************
[2025-10-06 14:42:48] 2025-10-06 18:42:01,753 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 14:42:48] 2025-10-06 18:42:01,753 | INFO     | ***************************************
[2025-10-06 14:42:48] 2025-10-06 18:42:01,753 | INFO     | 
[2025-10-06 14:42:48] 2025-10-06 18:42:01,758 | INFO     | architecture information:
[2025-10-06 14:42:48] 2025-10-06 18:42:01,758 | INFO     | executing command: cat /etc/os-release
[2025-10-06 14:42:48] 2025-10-06 18:42:01,776 | INFO     | cat /etc/os-release:
[2025-10-06 14:42:48] NAME="CentOS Linux"
[2025-10-06 14:42:48] VERSION="7 (Core)"
[2025-10-06 14:42:48] ID="centos"
[2025-10-06 14:42:48] ID_LIKE="rhel fedora"
[2025-10-06 14:42:48] VERSION_ID="7"
[2025-10-06 14:42:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 14:42:48] ANSI_COLOR="0;31"
[2025-10-06 14:42:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 14:42:48] HOME_URL="https://www.centos.org/"
[2025-10-06 14:42:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 14:42:48] 
[2025-10-06 14:42:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 14:42:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 14:42:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 14:42:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 14:42:48] 
[2025-10-06 14:42:48] 2025-10-06 18:42:01,776 | INFO     | ***************************************
[2025-10-06 14:42:48] 2025-10-06 18:42:02,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-06 14:42:48] 2025-10-06 18:42:02,411 | INFO     | sufficient remaining disk space (127695585280 B)
[2025-10-06 14:42:48] 2025-10-06 18:42:02,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 14:42:48] 2025-10-06 18:42:02,412 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 14:42:48] 2025-10-06 18:42:02,412 | INFO     | update_server=False
[2025-10-06 14:42:48] 2025-10-06 18:42:02,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 14:42:48] 2025-10-06 18:42:02,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 14:42:48] 2025-10-06 18:42:02,412 | INFO     | aborting loop
[2025-10-06 14:42:48] 2025-10-06 18:42:02,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 14:42:48] 2025-10-06 18:42:02,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 14:42:48] 2025-10-06 18:42:02,853 | INFO     | all data control threads have been joined
[2025-10-06 14:42:48] 2025-10-06 18:42:03,159 | INFO     | all payload control threads have been joined
[2025-10-06 14:42:48] 2025-10-06 18:42:03,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 14:42:48] 2025-10-06 18:42:03,417 | INFO     | [job] retrieve thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:03,418 | INFO     | [job] job monitor thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:03,467 | INFO     | all job control threads have been joined
[2025-10-06 14:42:48] 2025-10-06 18:42:03,508 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:03,854 | INFO     | [job] validate thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:03,862 | INFO     | [data] control thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:03,886 | INFO     | [data] copytool_in thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:04,165 | INFO     | [payload] control thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:04,217 | INFO     | [payload] validate_post thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:04,336 | INFO     | [job] queue monitor thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:04,439 | INFO     | [payload] failed_post thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:04,459 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:04,485 | INFO     | [job] control thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:04,788 | INFO     | [data] copytool_out thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:04,899 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:04,905 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:06,423 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 14:42:48] 2025-10-06 18:42:32,413 | INFO     | PID=1364027 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 14:42:48] 2025-10-06 18:42:32,414 | INFO     | .. there are 23 such processes running
[2025-10-06 14:42:48] 2025-10-06 18:42:32,414 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 14:42:48] 2025-10-06 18:42:32,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 14:42:48] 2025-10-06 18:42:32,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 14:42:48] 2025-10-06 18:42:42,032 | INFO     | [monitor] cgroup control has ended
[2025-10-06 14:42:48] 2025-10-06 18:42:42,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663674148672)>', '<ExcThread(monitor, started 140663190447872)>']
[2025-10-06 14:42:48] 2025-10-06 18:42:43,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 14:42:48] 2025-10-06 18:42:43,487 | INFO     | [monitor] control thread has ended
[2025-10-06 14:42:48] 2025-10-06 18:42:47,749 | INFO     | all workflow threads have been joined
[2025-10-06 14:42:48] 2025-10-06 18:42:47,750 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 14:42:48] 2025-10-06 18:42:47,750 | INFO     | traces error code: 0
[2025-10-06 14:42:48] 2025-10-06 18:42:47,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 14:42:48] 2025-10-06 18:42:48,032 [wrapper] ==== pilot stdout END ====
[2025-10-06 14:42:48] 2025-10-06 18:42:48,034 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 14:42:48] 2025-10-06 18:42:48,036 [wrapper] pilotpid: 1364027
[2025-10-06 14:42:48] 2025-10-06 18:42:48,038 [wrapper] Pilot exit status: 0
[2025-10-06 14:42:48] 2025-10-06 18:42:48,125 [wrapper] pandaids: 6832633700
[2025-10-06 14:42:48] 2025-10-06 18:42:48,346 [wrapper] cleanup supervisor_pilot 1698512 1364028
[2025-10-06 14:42:48] 2025-10-06 18:42:48,350 [wrapper] Test setup, not cleaning
[2025-10-06 14:42:48] 2025-10-06 18:42:48,352 [wrapper] apfmon messages muted
[2025-10-06 14:42:48] 2025-10-06 18:42:48,354 [wrapper] ==== wrapper stdout END ====
[2025-10-06 14:42:48] 2025-10-06 18:42:48,356 [wrapper] ==== wrapper stderr END ====
[2025-10-06 14:42:48]  *** Error codes and diagnostics ***
[2025-10-06 14:42:48]     "exeErrorCode": 0,
[2025-10-06 14:42:48]     "exeErrorDiag": "",
[2025-10-06 14:42:48]     "pilotErrorCode": 0,
[2025-10-06 14:42:48]     "pilotErrorDiag": "",
[2025-10-06 14:42:48]  *** Listing of results directory ***
[2025-10-06 14:42:48] total 391296
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 05:41 pilot3.tar.gz
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 05:49 queuedata.json
[2025-10-06 14:42:48] -rwx------. 1 boincer umatlas     36292 Oct  6 05:51 runpilot2-wrapper.sh
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas       100 Oct  6 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 14:42:48] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 13:24 run_atlas
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas       105 Oct  6 13:24 job.xml
[2025-10-06 14:42:48] -rw-r--r--. 2 boincer umatlas 215822648 Oct  6 13:24 EVNT.46376901._002494.pool.root.1
[2025-10-06 14:42:48] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 13:24 start_atlas.sh
[2025-10-06 14:42:48] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 13:24 shared
[2025-10-06 14:42:48] -rw-r--r--. 2 boincer umatlas    565608 Oct  6 13:24 input.tar.gz
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas         0 Oct  6 13:24 boinc_lockfile
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas      2519 Oct  6 13:24 pandaJob.out
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas    975018 Oct  6 13:25 agis_schedconf.cvmfs.json
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas   1560401 Oct  6 13:25 agis_ddmendpoints.agis.ALL.json
[2025-10-06 14:42:48] drwx------. 4 boincer umatlas      4096 Oct  6 13:25 pilot3
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas      6946 Oct  6 14:39 init_data.xml
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas 178964954 Oct  6 14:41 HITS.46376905._109269.pool.root.1
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas       529 Oct  6 14:41 boinc_task_state.xml
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas      1033 Oct  6 14:41 memory_monitor_summary.json
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas    353531 Oct  6 14:41 log.46376905._109269.job.log.tgz.1
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas        95 Oct  6 14:41 pilot_heartbeat.json
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas      7782 Oct  6 14:41 heartbeat.json
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas      8192 Oct  6 14:42 boinc_mmap_file
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas        27 Oct  6 14:42 wrapper_checkpoint.txt
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas      4825 Oct  6 14:42 pilotlog.txt
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas    647373 Oct  6 14:42 log.46376905._109269.job.log.1
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas       357 Oct  6 14:42 output.list
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas       620 Oct  6 14:42 runtime_log
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas   1024000 Oct  6 14:42 result.tar.gz
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas       654 Oct  6 14:42 yXyKDmZ3wP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyBTNDmkoCgZm.diag
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas      8703 Oct  6 14:42 runtime_log.err
[2025-10-06 14:42:48] -rw-r--r--. 1 boincer umatlas     22295 Oct  6 14:42 stderr.txt
[2025-10-06 14:42:48] HITS file was successfully produced:
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas 178964954 Oct  6 14:41 shared/HITS.pool.root.1
[2025-10-06 14:42:48]  *** Contents of shared directory: ***
[2025-10-06 14:42:48] total 387120
[2025-10-06 14:42:48] -rw-r--r--. 2 boincer umatlas 215822648 Oct  6 13:24 ATLAS.root_0
[2025-10-06 14:42:48] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 13:24 start_atlas.sh
[2025-10-06 14:42:48] -rw-r--r--. 2 boincer umatlas    565608 Oct  6 13:24 input.tar.gz
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas 178964954 Oct  6 14:41 HITS.pool.root.1
[2025-10-06 14:42:48] -rw-------. 1 boincer umatlas   1024000 Oct  6 14:42 result.tar.gz
14:42:50 (1359382): run_atlas exited; CPU time 26799.116522
14:42:50 (1359382): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN