Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:29:44 (3148062): wrapper (7.7.26015): starting
09:29:44 (3148062): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 09:29:44] Arguments: --nthreads 8
[2025-10-06 09:29:44] Threads: 8
[2025-10-06 09:29:44] Checking for CVMFS
[2025-10-06 09:29:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 09:29:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 09:29:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 09:29:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 09:29:45] 2.11.3.0 1859 21522 223892 151405 0 13 28962431 45568001 14481 130560 0 131095550 99.836 67575440 18107 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-10-06 09:29:45] CVMFS is ok
[2025-10-06 09:29:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 09:29:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 09:29:45] Further information can be found at the LHC@home message board.
[2025-10-06 09:29:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 09:29:45] Checking for apptainer binary...
[2025-10-06 09:29:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 09:29:45] Running /usr/bin/apptainer --version
[2025-10-06 09:29:45] apptainer version 1.4.1-1.el9
[2025-10-06 09:29:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 09:29:46] wns0005.triumf.lcg
[2025-10-06 09:29:46] apptainer works
[2025-10-06 09:29:47] Set ATHENA_PROC_NUMBER=8
[2025-10-06 09:29:47] Set ATHENA_CORE_NUMBER=8
[2025-10-06 09:29:47] Starting ATLAS job with PandaID=6832567571
[2025-10-06 09:29:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 09:39:07]  *** The last 200 lines of the pilot log: ***
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | WARNING  | wrong length of table data, x=[1759768461.0, 1759768522.0], y=[1649.0, 575930.0] (must be same and length>=4)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | ..............................
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . Timing measurements:
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . get job = 0 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . initial setup = 6 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . payload setup = 62 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . stage-in = 0 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . payload execution = 96 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . stage-out = 2 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . log creation = 0 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,145 | INFO     | ..............................
[2025-10-06 09:39:07] 2025-10-06 16:38:30,145 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 09:39:07] 2025-10-06 16:38:30,145 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832567571/pilotlog.txt
[2025-10-06 09:39:07] 2025-10-06 16:38:30,176 | INFO     | time since job start (453s) is within the limit (172800.0s)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,287 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 09:39:07] - Log from pilotlog.txt -
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | INFO     | extracted standard info from prmon json
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | WARNING  | wrong length of table data, x=[1759768461.0, 1759768522.0], y=[1649.0, 575930.0] (must be same and length>=4)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | ..............................
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . Timing measurements:
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . get job = 0 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . initial setup = 6 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . payload setup = 62 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . stage-in = 0 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . payload execution = 96 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . stage-out = 2 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . log creation = 0 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,145 | INFO     | ..............................
[2025-10-06 09:39:07] 2025-10-06 16:38:30,145 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 09:39:07] 2025-10-06 16:38:30,145 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832567571/pilotlog.txt
[2025-10-06 09:39:07] 2025-10-06 16:38:30,176 | INFO     | time since job start (453s) is within the limit (172800.0s)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,287 | WARNING  | 
[2025-10-06 09:39:07] [begin log extracts]
[2025-10-06 09:39:07] - Log from pilotlog.txt -
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | INFO     | extracted standard info from prmon json
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 09:39:07] 2025-10-06 16:38:30,143 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | WARNING  | wrong length of table data, x=[1759768461.0, 1759768522.0], y=[1649.0, 575930.0] (must be same and length>=4)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | ..............................
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . Timing measurements:
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . get job = 0 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . initial setup = 6 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . payload setup = 62 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . stage-in = 0 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . payload execution = 96 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . stage-out = 2 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,144 | INFO     | . log creation = 0 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,145 | INFO     | ..............................
[2025-10-06 09:39:07] 2025-10-06 16:38:30,145 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 09:39:07] 2025-10-06 16:38:30,145 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832567571/pilotlog.txt
[2025-10-06 09:39:07] 2025-10-06 16:38:30,176 | INFO     | time since job start (453s) is within the limit (172800.0s)
[2025-10-06 09:39:07] [end log extracts]
[2025-10-06 09:39:07] 2025-10-06 16:38:30,288 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,288 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 09:39:07] 2025-10-06 16:38:30,957 | INFO     | 
[2025-10-06 09:39:07] 2025-10-06 16:38:30,960 | INFO     | job summary report
[2025-10-06 09:39:07] 2025-10-06 16:38:30,960 | INFO     | --------------------------------------------------
[2025-10-06 09:39:07] 2025-10-06 16:38:30,960 | INFO     | PanDA job id: 6832567571
[2025-10-06 09:39:07] 2025-10-06 16:38:30,960 | INFO     | task id: 46376905
[2025-10-06 09:39:07] 2025-10-06 16:38:30,960 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 09:35:32,540 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 09:39:07] 2025-10-06 16:38:30,961 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 09:39:07] 2025-10-06 16:38:30,961 | INFO     | pilot state: failed 
[2025-10-06 09:39:07] 2025-10-06 16:38:30,961 | INFO     | transexitcode: 65
[2025-10-06 09:39:07] 2025-10-06 16:38:30,989 | INFO     | exeerrorcode: 65
[2025-10-06 09:39:07] 2025-10-06 16:38:30,989 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,989 | INFO     | exitcode: 65
[2025-10-06 09:39:07] 2025-10-06 16:38:30,989 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 09:39:07] 2025-10-06 16:38:30,989 | INFO     | cpuconsumptiontime: 19 s
[2025-10-06 09:39:07] 2025-10-06 16:38:30,989 | INFO     | nevents: 0
[2025-10-06 09:39:07] 2025-10-06 16:38:30,990 | INFO     | neventsw: 0
[2025-10-06 09:39:07] 2025-10-06 16:38:30,990 | INFO     | pid: 3159770
[2025-10-06 09:39:07] 2025-10-06 16:38:30,990 | INFO     | pgrp: 3159770
[2025-10-06 09:39:07] 2025-10-06 16:38:30,990 | INFO     | corecount: 8
[2025-10-06 09:39:07] 2025-10-06 16:38:30,990 | INFO     | event service: False
[2025-10-06 09:39:07] 2025-10-06 16:38:30,990 | INFO     | sizes: {0: 2348590, 1: 2348646, 2: 2348702, 3: 2348873, 4: 2348901, 16: 2348929, 27: 2349085, 38: 2349113, 50: 2349431, 61: 2349431, 165: 2372970, 168: 2377262, 17
[2025-10-06 09:39:07] 2025-10-06 16:38:30,990 | INFO     | --------------------------------------------------
[2025-10-06 09:39:07] 2025-10-06 16:38:30,990 | INFO     | 
[2025-10-06 09:39:07] 2025-10-06 16:38:30,990 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 09:39:07] 2025-10-06 16:38:31,322 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,323 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,324 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 09:39:07] 2025-10-06 16:38:31,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,324 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 09:39:07] 2025-10-06 16:38:31,324 | INFO     | job 6832567571 has completed (purged errors)
[2025-10-06 09:39:07] 2025-10-06 16:38:31,324 | INFO     | overall cleanup function is called
[2025-10-06 09:39:07] 2025-10-06 16:38:32,331 | INFO     | --- collectZombieJob: --- 10, [3159770]
[2025-10-06 09:39:07] 2025-10-06 16:38:32,331 | INFO     | zombie collector waiting for pid 3159770
[2025-10-06 09:39:07] 2025-10-06 16:38:32,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 09:39:07] 2025-10-06 16:38:32,331 | INFO     | collected zombie processes
[2025-10-06 09:39:07] 2025-10-06 16:38:32,331 | INFO     | will attempt to kill all subprocesses of pid=3159770
[2025-10-06 09:39:07] 2025-10-06 16:38:33,058 | INFO     | process IDs to be killed: [3159770] (in reverse order)
[2025-10-06 09:39:07] 2025-10-06 16:38:33,120 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 09:39:07] 2025-10-06 16:38:33,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 09:39:07] 2025-10-06 16:38:33,143 | INFO     | did not find any defunct processes belonging to 3159770
[2025-10-06 09:39:07] 2025-10-06 16:38:33,183 | INFO     | did not find any defunct processes belonging to 3159770
[2025-10-06 09:39:07] 2025-10-06 16:38:33,183 | INFO     | ready for new job
[2025-10-06 09:39:07] 2025-10-06 16:38:33,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 09:39:07] 2025-10-06 16:38:33,190 | INFO     | ***************************************
[2025-10-06 09:39:07] 2025-10-06 16:38:33,190 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 09:39:07] 2025-10-06 16:38:33,190 | INFO     | ***************************************
[2025-10-06 09:39:07] 2025-10-06 16:38:33,190 | INFO     | 
[2025-10-06 09:39:07] 2025-10-06 16:38:33,192 | INFO     | architecture information:
[2025-10-06 09:39:07] 2025-10-06 16:38:33,207 | INFO     | executing command: cat /etc/os-release
[2025-10-06 09:39:07] 2025-10-06 16:38:33,295 | INFO     | cat /etc/os-release:
[2025-10-06 09:39:07] NAME="CentOS Linux"
[2025-10-06 09:39:07] VERSION="7 (Core)"
[2025-10-06 09:39:07] ID="centos"
[2025-10-06 09:39:07] ID_LIKE="rhel fedora"
[2025-10-06 09:39:07] VERSION_ID="7"
[2025-10-06 09:39:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 09:39:07] ANSI_COLOR="0;31"
[2025-10-06 09:39:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 09:39:07] HOME_URL="https://www.centos.org/"
[2025-10-06 09:39:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 09:39:07] 
[2025-10-06 09:39:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 09:39:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 09:39:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 09:39:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 09:39:07] 
[2025-10-06 09:39:07] 2025-10-06 16:38:33,295 | INFO     | ***************************************
[2025-10-06 09:39:07] 2025-10-06 16:38:33,799 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 09:39:07] 2025-10-06 16:38:33,900 | INFO     | sufficient remaining disk space (1426283560960 B)
[2025-10-06 09:39:07] 2025-10-06 16:38:33,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 09:39:07] 2025-10-06 16:38:33,901 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 09:39:07] 2025-10-06 16:38:33,901 | INFO     | update_server=False
[2025-10-06 09:39:07] 2025-10-06 16:38:33,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 09:39:07] 2025-10-06 16:38:33,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 09:39:07] 2025-10-06 16:38:33,902 | INFO     | aborting loop
[2025-10-06 09:39:07] 2025-10-06 16:38:34,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 09:39:07] 2025-10-06 16:38:34,784 | INFO     | all data control threads have been joined
[2025-10-06 09:39:07] 2025-10-06 16:38:34,907 | INFO     | [job] retrieve thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:34,910 | INFO     | [job] job monitor thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:34,979 | INFO     | all payload control threads have been joined
[2025-10-06 09:39:07] 2025-10-06 16:38:35,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 09:39:07] 2025-10-06 16:38:35,267 | INFO     | all job control threads have been joined
[2025-10-06 09:39:07] 2025-10-06 16:38:35,340 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:35,391 | INFO     | [data] copytool_in thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:35,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 09:39:07] 2025-10-06 16:38:35,759 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:35,790 | INFO     | [data] control thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:35,954 | INFO     | [payload] failed_post thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:35,955 | INFO     | [payload] validate_post thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:35,985 | INFO     | [payload] control thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:36,049 | INFO     | [job] validate thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:36,274 | INFO     | [job] control thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:36,275 | INFO     | [data] copytool_out thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:36,314 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:36,360 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:36,525 | INFO     | [job] queue monitor thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:39,157 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 09:39:07] 2025-10-06 16:38:56,923 | INFO     | [monitor] cgroup control has ended
[2025-10-06 09:39:07] 2025-10-06 16:38:58,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135846553408)>', '<ExcThread(monitor, started 140135286945536)>']
[2025-10-06 09:39:07] 2025-10-06 16:39:03,790 | INFO     | all workflow threads have been joined
[2025-10-06 09:39:07] 2025-10-06 16:39:03,790 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 09:39:07] 2025-10-06 16:39:03,790 | INFO     | traces error code: 0
[2025-10-06 09:39:07] 2025-10-06 16:39:03,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 09:39:07] 2025-10-06 16:39:04,615 | INFO     | PID=3152431 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 09:39:07] 2025-10-06 16:39:04,616 | INFO     | .. there are 26 such processes running
[2025-10-06 09:39:07] 2025-10-06 16:39:04,616 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 09:39:07] 2025-10-06 16:39:04,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 09:39:07] 2025-10-06 16:39:04,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 09:39:07] 2025-10-06 16:39:04,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 09:39:07] 2025-10-06 16:39:04,617 | INFO     | [monitor] control thread has ended
[2025-10-06 09:39:07] 2025-10-06 16:39:05,407 [wrapper] ==== pilot stdout END ====
[2025-10-06 09:39:07] 2025-10-06 16:39:05,443 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 09:39:07] 2025-10-06 16:39:05,466 [wrapper] pilotpid: 3152431
[2025-10-06 09:39:07] 2025-10-06 16:39:05,574 [wrapper] Pilot exit status: 0
[2025-10-06 09:39:07] 2025-10-06 16:39:05,819 [wrapper] pandaids: 6832567571
[2025-10-06 09:39:07] 2025-10-06 16:39:06,528 [wrapper] cleanup supervisor_pilot 3152437 3152432
[2025-10-06 09:39:07] 2025-10-06 16:39:06,563 [wrapper] Test setup, not cleaning
[2025-10-06 09:39:07] 2025-10-06 16:39:06,602 [wrapper] apfmon messages muted
[2025-10-06 09:39:07] 2025-10-06 16:39:06,699 [wrapper] ==== wrapper stdout END ====
[2025-10-06 09:39:07] 2025-10-06 16:39:06,730 [wrapper] ==== wrapper stderr END ====
[2025-10-06 09:39:07]  *** Error codes and diagnostics ***
[2025-10-06 09:39:07]     "exeErrorCode": 65,
[2025-10-06 09:39:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 09:39:07]     "pilotErrorCode": 1305,
[2025-10-06 09:39:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 09:39:07]  *** Listing of results directory ***
[2025-10-06 09:39:07] total 213336
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc    552446 Oct  6 02:41 pilot3.tar.gz
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc      5112 Oct  6 02:47 queuedata.json
[2025-10-06 09:39:07] -rwx------. 1 boinc boinc     36292 Oct  6 02:48 runpilot2-wrapper.sh
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc       100 Oct  6 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 09:39:07] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 09:29 run_atlas
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc       105 Oct  6 09:29 job.xml
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc      6443 Oct  6 09:29 init_data.xml
[2025-10-06 09:39:07] -rw-r--r--. 2 boinc boinc 214302435 Oct  6 09:29 EVNT.46376901._004043.pool.root.1
[2025-10-06 09:39:07] -rw-r--r--. 2 boinc boinc     15120 Oct  6 09:29 start_atlas.sh
[2025-10-06 09:39:07] drwxrwx--x. 2 boinc boinc      4096 Oct  6 09:29 shared
[2025-10-06 09:39:07] -rw-r--r--. 2 boinc boinc    565604 Oct  6 09:29 input.tar.gz
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc         0 Oct  6 09:29 boinc_lockfile
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc      2521 Oct  6 09:29 pandaJob.out
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc    975002 Oct  6 09:30 agis_schedconf.cvmfs.json
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc   1560401 Oct  6 09:30 agis_ddmendpoints.agis.ALL.json
[2025-10-06 09:39:07] drwx------. 4 boinc boinc      4096 Oct  6 09:30 pilot3
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc       525 Oct  6 09:35 boinc_task_state.xml
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc       980 Oct  6 09:35 memory_monitor_summary.json
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc     23923 Oct  6 09:35 log.46376905._109076.job.log.tgz.1
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc      8396 Oct  6 09:38 heartbeat.json
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc        23 Oct  6 09:39 wrapper_checkpoint.txt
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc        95 Oct  6 09:39 pilot_heartbeat.json
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc       823 Oct  6 09:39 pilotlog.txt
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc    111535 Oct  6 09:39 log.46376905._109076.job.log.1
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc       188 Oct  6 09:39 output.list
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc      8192 Oct  6 09:39 boinc_mmap_file
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc       620 Oct  6 09:39 runtime_log
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc    153600 Oct  6 09:39 result.tar.gz
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc       646 Oct  6 09:39 vQNLDmm0wP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYATNDmPGFzIm.diag
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc      8526 Oct  6 09:39 runtime_log.err
[2025-10-06 09:39:07] -rw-r--r--. 1 boinc boinc     21847 Oct  6 09:39 stderr.txt
[2025-10-06 09:39:07] No HITS result produced
[2025-10-06 09:39:07]  *** Contents of shared directory: ***
[2025-10-06 09:39:07] total 210008
[2025-10-06 09:39:07] -rw-r--r--. 2 boinc boinc 214302435 Oct  6 09:29 ATLAS.root_0
[2025-10-06 09:39:07] -rw-r--r--. 2 boinc boinc     15120 Oct  6 09:29 start_atlas.sh
[2025-10-06 09:39:07] -rw-r--r--. 2 boinc boinc    565604 Oct  6 09:29 input.tar.gz
[2025-10-06 09:39:07] -rw-------. 1 boinc boinc    153600 Oct  6 09:39 result.tar.gz
09:39:08 (3148062): run_atlas exited; CPU time 35.758485
09:39:08 (3148062): called boinc_finish(0)

</stderr_txt>
]]>

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