Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:12:54 (2497327): wrapper (7.7.26015): starting
08:12:54 (2497327): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 08:12:54] Arguments: --nthreads 12
[2025-10-06 08:12:54] Threads: 12
[2025-10-06 08:12:54] Checking for CVMFS
[2025-10-06 08:12:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 08:12:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 08:12:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 08:12:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 08:12:55] 2.11.5.0 2579 23019 161244 151401 1 473 32079000 45568000 24317 130560 0 216448969 99.859 96861158 26546 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 08:12:55] CVMFS is ok
[2025-10-06 08:12:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 08:12:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 08:12:55] Further information can be found at the LHC@home message board.
[2025-10-06 08:12:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 08:12:55] Checking for apptainer binary...
[2025-10-06 08:12:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 08:12:55] Running /usr/bin/apptainer --version
[2025-10-06 08:12:55] apptainer version 1.4.1-1.el9
[2025-10-06 08:12:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 08:12:55] wns0061.triumf.lcg
[2025-10-06 08:12:55] apptainer works
[2025-10-06 08:12:55] Set ATHENA_PROC_NUMBER=12
[2025-10-06 08:12:55] Set ATHENA_CORE_NUMBER=12
[2025-10-06 08:12:55] Starting ATLAS job with PandaID=6832673736
[2025-10-06 08:12:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 08:17:51]  *** The last 200 lines of the pilot log: ***
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | WARNING  | wrong length of table data, x=[1759763676.0], y=[1747.0] (must be same and length>=4)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | could have reported an average CPU frequency of 2757 MHz (4 samples)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | ..............................
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . Timing measurements:
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . get job = 0 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . initial setup = 3 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . payload setup = 15 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . stage-in = 0 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . payload execution = 40 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | . stage-out = 1 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | . log creation = 0 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | ..............................
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832673736/pilotlog.txt
[2025-10-06 08:17:51] 2025-10-06 15:17:15,039 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 08:17:51] - Log from pilotlog.txt -
[2025-10-06 08:17:51] 2025-10-06 15:17:14,960 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832673736/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 08:17:51] 2025-10-06 15:17:14,961 | INFO     | extracted standard info from prmon json
[2025-10-06 08:17:51] 2025-10-06 15:17:15,004 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 08:17:51] 2025-10-06 15:17:15,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 08:17:51] 2025-10-06 15:17:15,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 08:17:51] 2025-10-06 15:17:15,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | WARNING  | wrong length of table data, x=[1759763676.0], y=[1747.0] (must be same and length>=4)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | could have reported an average CPU frequency of 2757 MHz (4 samples)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | ..............................
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . Timing measurements:
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . get job = 0 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . initial setup = 3 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . payload setup = 15 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . stage-in = 0 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . payload execution = 40 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | . stage-out = 1 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | . log creation = 0 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | ..............................
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832673736/pilotlog.txt
[2025-10-06 08:17:51] 2025-10-06 15:17:15,039 | WARNING  | 
[2025-10-06 08:17:51] [begin log extracts]
[2025-10-06 08:17:51] - Log from pilotlog.txt -
[2025-10-06 08:17:51] 2025-10-06 15:17:14,960 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832673736/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 08:17:51] 2025-10-06 15:17:14,961 | INFO     | extracted standard info from prmon json
[2025-10-06 08:17:51] 2025-10-06 15:17:15,004 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 08:17:51] 2025-10-06 15:17:15,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 08:17:51] 2025-10-06 15:17:15,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 08:17:51] 2025-10-06 15:17:15,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | WARNING  | wrong length of table data, x=[1759763676.0], y=[1747.0] (must be same and length>=4)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | could have reported an average CPU frequency of 2757 MHz (4 samples)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | ..............................
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . Timing measurements:
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . get job = 0 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . initial setup = 3 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . payload setup = 15 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . stage-in = 0 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,005 | INFO     | . payload execution = 40 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | . stage-out = 1 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | . log creation = 0 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | ..............................
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 08:17:51] 2025-10-06 15:17:15,006 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832673736/pilotlog.txt
[2025-10-06 08:17:51] [end log extracts]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,039 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,040 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 08:17:51] 2025-10-06 15:17:15,491 | INFO     | 
[2025-10-06 08:17:51] 2025-10-06 15:17:15,491 | INFO     | job summary report
[2025-10-06 08:17:51] 2025-10-06 15:17:15,491 | INFO     | --------------------------------------------------
[2025-10-06 08:17:51] 2025-10-06 15:17:15,491 | INFO     | PanDA job id: 6832673736
[2025-10-06 08:17:51] 2025-10-06 15:17:15,491 | INFO     | task id: 46376905
[2025-10-06 08:17:51] 2025-10-06 15:17:15,491 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 08:14:54,567 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 08:17:51] 2025-10-06 15:17:15,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 08:17:51] 2025-10-06 15:17:15,491 | INFO     | pilot state: failed 
[2025-10-06 08:17:51] 2025-10-06 15:17:15,491 | INFO     | transexitcode: 65
[2025-10-06 08:17:51] 2025-10-06 15:17:15,491 | INFO     | exeerrorcode: 65
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | exitcode: 65
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | cpuconsumptiontime: 17 s
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | nevents: 0
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | neventsw: 0
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | pid: 2507849
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | pgrp: 2507849
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | corecount: 12
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | event service: False
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | sizes: {0: 2348643, 1: 2348814, 2: 2348870, 12: 2348870, 13: 2349160, 23: 2349216, 59: 2372546, 62: 2376838, 63: 2376866, 191: 2377032}
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | --------------------------------------------------
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | 
[2025-10-06 08:17:51] 2025-10-06 15:17:15,492 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 08:17:51] 2025-10-06 15:17:15,603 | INFO     | time since job start (226s) is within the limit (172800.0s)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,615 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,615 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 08:17:51] 2025-10-06 15:17:15,615 | INFO     | job 6832673736 has completed (purged errors)
[2025-10-06 08:17:51] 2025-10-06 15:17:15,615 | INFO     | overall cleanup function is called
[2025-10-06 08:17:51] 2025-10-06 15:17:16,645 | INFO     | --- collectZombieJob: --- 10, [2507849]
[2025-10-06 08:17:51] 2025-10-06 15:17:16,645 | INFO     | zombie collector waiting for pid 2507849
[2025-10-06 08:17:51] 2025-10-06 15:17:16,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 08:17:51] 2025-10-06 15:17:16,645 | INFO     | collected zombie processes
[2025-10-06 08:17:51] 2025-10-06 15:17:16,645 | INFO     | will attempt to kill all subprocesses of pid=2507849
[2025-10-06 08:17:51] 2025-10-06 15:17:18,120 | INFO     | PID=2501096 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 08:17:51] 2025-10-06 15:17:18,120 | INFO     | .. there are 42 such processes running
[2025-10-06 08:17:51] 2025-10-06 15:17:18,160 | INFO     | process IDs to be killed: [2507849] (in reverse order)
[2025-10-06 08:17:51] 2025-10-06 15:17:18,670 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 08:17:51] 2025-10-06 15:17:18,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 08:17:51] 2025-10-06 15:17:18,687 | INFO     | did not find any defunct processes belonging to 2507849
[2025-10-06 08:17:51] 2025-10-06 15:17:18,715 | INFO     | did not find any defunct processes belonging to 2507849
[2025-10-06 08:17:51] 2025-10-06 15:17:18,721 | INFO     | ready for new job
[2025-10-06 08:17:51] 2025-10-06 15:17:18,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 08:17:51] 2025-10-06 15:17:18,722 | INFO     | ***************************************
[2025-10-06 08:17:51] 2025-10-06 15:17:18,722 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 08:17:51] 2025-10-06 15:17:18,722 | INFO     | ***************************************
[2025-10-06 08:17:51] 2025-10-06 15:17:18,722 | INFO     | 
[2025-10-06 08:17:51] 2025-10-06 15:17:18,724 | INFO     | architecture information:
[2025-10-06 08:17:51] 2025-10-06 15:17:18,733 | INFO     | executing command: cat /etc/os-release
[2025-10-06 08:17:51] 2025-10-06 15:17:18,772 | INFO     | cat /etc/os-release:
[2025-10-06 08:17:51] NAME="CentOS Linux"
[2025-10-06 08:17:51] VERSION="7 (Core)"
[2025-10-06 08:17:51] ID="centos"
[2025-10-06 08:17:51] ID_LIKE="rhel fedora"
[2025-10-06 08:17:51] VERSION_ID="7"
[2025-10-06 08:17:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 08:17:51] ANSI_COLOR="0;31"
[2025-10-06 08:17:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 08:17:51] HOME_URL="https://www.centos.org/"
[2025-10-06 08:17:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 08:17:51] 
[2025-10-06 08:17:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 08:17:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 08:17:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 08:17:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 08:17:51] 
[2025-10-06 08:17:51] 2025-10-06 15:17:18,772 | INFO     | ***************************************
[2025-10-06 08:17:51] 2025-10-06 15:17:19,276 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 08:17:51] 2025-10-06 15:17:19,342 | INFO     | sufficient remaining disk space (2141818191872 B)
[2025-10-06 08:17:51] 2025-10-06 15:17:19,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 08:17:51] 2025-10-06 15:17:19,342 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 08:17:51] 2025-10-06 15:17:19,342 | INFO     | update_server=False
[2025-10-06 08:17:51] 2025-10-06 15:17:19,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 08:17:51] 2025-10-06 15:17:19,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 08:17:51] 2025-10-06 15:17:19,343 | INFO     | aborting loop
[2025-10-06 08:17:51] 2025-10-06 15:17:19,343 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 08:17:51] 2025-10-06 15:17:19,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 08:17:51] 2025-10-06 15:17:19,397 | INFO     | all data control threads have been joined
[2025-10-06 08:17:51] 2025-10-06 15:17:20,061 | INFO     | all job control threads have been joined
[2025-10-06 08:17:51] 2025-10-06 15:17:20,356 | INFO     | [job] retrieve thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:20,356 | INFO     | [job] job monitor thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:20,404 | INFO     | [data] control thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:20,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 08:17:51] 2025-10-06 15:17:20,705 | INFO     | all payload control threads have been joined
[2025-10-06 08:17:51] 2025-10-06 15:17:20,850 | INFO     | [payload] validate_post thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,068 | INFO     | [job] control thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,211 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,328 | INFO     | [data] copytool_in thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,351 | INFO     | [data] copytool_out thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,518 | INFO     | [job] queue monitor thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,553 | INFO     | [payload] failed_post thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,712 | INFO     | [payload] control thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,733 | INFO     | [job] validate thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,806 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:21,830 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:23,358 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 08:17:51] 2025-10-06 15:17:29,200 | INFO     | [monitor] cgroup control has ended
[2025-10-06 08:17:51] 2025-10-06 15:17:29,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926847338304)>', '<ExcThread(monitor, started 139925865359104)>']
[2025-10-06 08:17:51] 2025-10-06 15:17:34,756 | INFO     | all workflow threads have been joined
[2025-10-06 08:17:51] 2025-10-06 15:17:34,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 08:17:51] 2025-10-06 15:17:34,757 | INFO     | traces error code: 0
[2025-10-06 08:17:51] 2025-10-06 15:17:34,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 08:17:51] 2025-10-06 15:17:50,609 | INFO     | PID=2501096 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 08:17:51] 2025-10-06 15:17:50,609 | INFO     | .. there are 42 such processes running
[2025-10-06 08:17:51] 2025-10-06 15:17:50,610 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 08:17:51] 2025-10-06 15:17:50,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 08:17:51] 2025-10-06 15:17:50,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 08:17:51] 2025-10-06 15:17:50,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 08:17:51] 2025-10-06 15:17:50,610 | INFO     | [monitor] control thread has ended
[2025-10-06 08:17:51] 2025-10-06 15:17:51,084 [wrapper] ==== pilot stdout END ====
[2025-10-06 08:17:51] 2025-10-06 15:17:51,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 08:17:51] 2025-10-06 15:17:51,091 [wrapper] pilotpid: 2501096
[2025-10-06 08:17:51] 2025-10-06 15:17:51,101 [wrapper] Pilot exit status: 0
[2025-10-06 08:17:51] 2025-10-06 15:17:51,212 [wrapper] pandaids: 6832673736
[2025-10-06 08:17:51] 2025-10-06 15:17:51,579 [wrapper] cleanup supervisor_pilot 2501102 2501097
[2025-10-06 08:17:51] 2025-10-06 15:17:51,595 [wrapper] Test setup, not cleaning
[2025-10-06 08:17:51] 2025-10-06 15:17:51,605 [wrapper] apfmon messages muted
[2025-10-06 08:17:51] 2025-10-06 15:17:51,620 [wrapper] ==== wrapper stdout END ====
[2025-10-06 08:17:51] 2025-10-06 15:17:51,635 [wrapper] ==== wrapper stderr END ====
[2025-10-06 08:17:51]  *** Error codes and diagnostics ***
[2025-10-06 08:17:51]     "exeErrorCode": 65,
[2025-10-06 08:17:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 08:17:51]     "pilotErrorCode": 1305,
[2025-10-06 08:17:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 08:17:51]  *** Listing of results directory ***
[2025-10-06 08:17:51] total 214760
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc    552446 Oct  6 05:50 pilot3.tar.gz
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc      5112 Oct  6 05:52 queuedata.json
[2025-10-06 08:17:51] -rwx------. 1 boinc boinc     36292 Oct  6 05:52 runpilot2-wrapper.sh
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc       100 Oct  6 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 08:17:51] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 08:12 run_atlas
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc       105 Oct  6 08:12 job.xml
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc      6594 Oct  6 08:12 init_data.xml
[2025-10-06 08:17:51] -rw-r--r--. 2 boinc boinc 215807097 Oct  6 08:12 EVNT.46376901._004143.pool.root.1
[2025-10-06 08:17:51] -rw-r--r--. 2 boinc boinc     15120 Oct  6 08:12 start_atlas.sh
[2025-10-06 08:17:51] drwxrwx--x. 2 boinc boinc      4096 Oct  6 08:12 shared
[2025-10-06 08:17:51] -rw-r--r--. 2 boinc boinc    565602 Oct  6 08:12 input.tar.gz
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc         0 Oct  6 08:12 boinc_lockfile
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc      2519 Oct  6 08:12 pandaJob.out
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc    975002 Oct  6 08:13 agis_schedconf.cvmfs.json
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc   1560401 Oct  6 08:13 agis_ddmendpoints.agis.ALL.json
[2025-10-06 08:17:51] drwx------. 4 boinc boinc      4096 Oct  6 08:13 pilot3
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc       945 Oct  6 08:15 memory_monitor_summary.json
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc     21590 Oct  6 08:15 log.46376905._111724.job.log.tgz.1
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc      8396 Oct  6 08:17 heartbeat.json
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc        22 Oct  6 08:17 wrapper_checkpoint.txt
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc      8192 Oct  6 08:17 boinc_mmap_file
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc       523 Oct  6 08:17 boinc_task_state.xml
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc       823 Oct  6 08:17 pilotlog.txt
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc        95 Oct  6 08:17 pilot_heartbeat.json
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc     90111 Oct  6 08:17 log.46376905._111724.job.log.1
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc       188 Oct  6 08:17 output.list
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc       620 Oct  6 08:17 runtime_log
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc    133120 Oct  6 08:17 result.tar.gz
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc      8528 Oct  6 08:17 runtime_log.err
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc       644 Oct  6 08:17 54GKDmoszP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFYTNDm5EmwVo.diag
[2025-10-06 08:17:51] -rw-r--r--. 1 boinc boinc     21953 Oct  6 08:17 stderr.txt
[2025-10-06 08:17:51] No HITS result produced
[2025-10-06 08:17:51]  *** Contents of shared directory: ***
[2025-10-06 08:17:51] total 211456
[2025-10-06 08:17:51] -rw-r--r--. 2 boinc boinc 215807097 Oct  6 08:12 ATLAS.root_0
[2025-10-06 08:17:51] -rw-r--r--. 2 boinc boinc     15120 Oct  6 08:12 start_atlas.sh
[2025-10-06 08:17:51] -rw-r--r--. 2 boinc boinc    565602 Oct  6 08:12 input.tar.gz
[2025-10-06 08:17:51] -rw-------. 1 boinc boinc    133120 Oct  6 08:17 result.tar.gz
08:17:53 (2497327): run_atlas exited; CPU time 26.212411
08:17:53 (2497327): called boinc_finish(0)

</stderr_txt>
]]>

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