Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-06 15:51:53 (21371): vboxwrapper version 26210
2025-10-06 15:51:53 (21371): BOINC client version: 7.9.3
2025-10-06 15:51:53 (21371): Detected: VirtualBox VboxManage Interface (Version: 5.2.42)
2025-10-06 15:51:53 (21371): Successfully copied 'init_data.xml' to the shared directory.
2025-10-06 15:51:54 (21371): Create VM. (boinc_7bbc969fd87e4217, slot#0)
2025-10-06 15:51:54 (21371): Setting Memory Size for VM. (4300MB)
2025-10-06 15:51:54 (21371): Setting CPU Count for VM. (3)
2025-10-06 15:51:54 (21371): Setting Chipset Options for VM.
2025-10-06 15:51:54 (21371): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-06 15:51:54 (21371): Setting Boot Options for VM.
2025-10-06 15:51:55 (21371): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-06 15:51:55 (21371): Enabling VM Network Access.
2025-10-06 15:51:55 (21371): Disabling USB Support for VM.
2025-10-06 15:51:55 (21371): Disabling COM Port Support for VM.
2025-10-06 15:51:55 (21371): Disabling LPT Port Support for VM.
2025-10-06 15:51:55 (21371): Disabling Audio Support for VM.
2025-10-06 15:51:55 (21371): Disabling Clipboard Support for VM.
2025-10-06 15:51:55 (21371): Disabling Drag and Drop Support for VM.
2025-10-06 15:51:56 (21371): Adding storage controller(s) to VM.
2025-10-06 15:51:56 (21371): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-06 15:51:56 (21371): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-06 15:51:57 (21371): forwarding host port 35095 to guest port 80
2025-10-06 15:51:57 (21371): Enabling remote desktop for VM.
2025-10-06 15:51:57 (21371): Required extension pack not installed, remote desktop not enabled.
2025-10-06 15:51:57 (21371): Enabling shared directory for VM.
2025-10-06 15:51:59 (21371): Starting VM using VBoxManage interface. (boinc_7bbc969fd87e4217, slot#0)
2025-10-06 15:52:00 (21371): Successfully started VM. (PID = '21760')
2025-10-06 15:52:00 (21371): Reporting VM Process ID to BOINC.
2025-10-06 15:52:00 (21371): Guest Log: BIOS: VirtualBox 5.2.41
2025-10-06 15:52:00 (21371): Guest Log: CPUID EDX: 0x178bfbff
2025-10-06 15:52:00 (21371): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-06 15:52:00 (21371): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-06 15:52:00 (21371): Detected: Web Application Enabled (http://localhost:35095)
2025-10-06 15:52:00 (21371): Preference change detected
2025-10-06 15:52:00 (21371): Setting CPU throttle for VM. (75%)
2025-10-06 15:52:00 (21371): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-06 15:52:02 (21371): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-06 15:52:02 (21371): Guest Log: BIOS: Booting from Hard Disk...
2025-10-06 15:52:06 (21371): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-06 15:52:06 (21371): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-06 15:52:06 (21371): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-06 15:52:14 (21371): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-06 15:52:14 (21371): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-06 15:52:27 (21371): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-06 15:52:27 (21371): Guest Log: 00:00:00.000297 main     Log opened 2025-10-06T13:52:25.423666000Z
2025-10-06 15:52:27 (21371): Guest Log: 00:00:00.000577 main     OS Product: Linux
2025-10-06 15:52:27 (21371): Guest Log: 00:00:00.000930 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-06 15:52:27 (21371): Guest Log: 00:00:00.000982 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-06 15:52:27 (21371): Guest Log: 00:00:00.001022 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-06 15:52:27 (21371): Guest Log: 00:00:00.001023 main     Process ID: 1256
2025-10-06 15:52:27 (21371): Guest Log: 00:00:00.001024 main     Package type: LINUX_64BITS_GENERIC
2025-10-06 15:52:27 (21371): Guest Log: 00:00:00.003728 main     5.2.32 r132073 started. Verbose level = 0
2025-10-06 15:52:28 (21371): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-06 15:52:28 (21371): Guest Log: [INFO] Mounting shared directory
2025-10-06 15:52:28 (21371): Guest Log: [INFO] Checking for init_data.xml
2025-10-06 15:52:38 (21371): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-06 15:52:38 (21371): Guest Log: [INFO] Detected branch: prod
2025-10-06 15:52:38 (21371): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-06 15:52:38 (21371): Guest Log: Copying input files
2025-10-06 15:52:41 (21371): Guest Log: Copied input files into RunAtlas.
2025-10-06 15:52:41 (21371): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-06 15:52:41 (21371): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-06 15:52:41 (21371): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-06 15:52:41 (21371): Guest Log: Further information can be found at the LHC@home message board.
2025-10-06 15:52:54 (21371): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-06 15:52:55 (21371): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-06 15:52:55 (21371): Guest Log: 2.6.3.0 1535 0 32180 151399 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-06 15:52:58 (21371): Guest Log: copied the webapp to /var/www
2025-10-06 15:52:58 (21371): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-06 15:52:58 (21371): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-06 15:52:58 (21371): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-06 15:52:58 (21371): Guest Log:  *** Starting ATLAS job. (PandaID=6832340041 taskID=46376905) ***
2025-10-06 17:31:01 (21371): Status Report: Elapsed Time: '6000.000000'
2025-10-06 17:31:01 (21371): Status Report: CPU Time: '12535.800000'
2025-10-06 18:31:13 (21371): VM state change detected. (old = 'running', new = 'paused')
2025-10-06 18:38:48 (21371): VM state change detected. (old = 'paused', new = 'running')
2025-10-06 18:40:04 (21371): VM state change detected. (old = 'running', new = 'paused')
2025-10-06 18:43:16 (21371): VM state change detected. (old = 'paused', new = 'running')
2025-10-06 19:20:49 (21371): Status Report: Elapsed Time: '12000.000000'
2025-10-06 19:20:49 (21371): Status Report: CPU Time: '25942.000000'
2025-10-06 20:59:50 (21371): Status Report: Elapsed Time: '18000.000000'
2025-10-06 20:59:50 (21371): Status Report: CPU Time: '39358.920000'
2025-10-06 22:38:50 (21371): Status Report: Elapsed Time: '24000.000000'
2025-10-06 22:38:50 (21371): Status Report: CPU Time: '52767.260000'
2025-10-06 23:16:19 (21371): Guest Log:  *** Job finished ***
2025-10-06 23:16:19 (21371): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:19,777 | INFO     | [payload] validate_pre thread has finished
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:22,796 | INFO     | [data] queue_monitor thread has finished
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:31,126 | INFO     | [monitor] cgroup control has ended
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:32,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140560659822400)>', '<ExcThread(monitor, started 140559775688448)>']
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:32,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:32,979 | INFO     | [monitor] control thread has ended
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,474 | INFO     | all workflow threads have been joined
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,474 | INFO     | end of generic workflow (traces error code: 0)
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,474 | INFO     | traces error code: 0
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,626 [wrapper] ==== pilot stdout END ====
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,635 [wrapper] ==== wrapper stdout RESUME ====
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,643 [wrapper] pilotpid: 5918
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,653 [wrapper] Pilot exit status: 0
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,741 [wrapper] pandaids: 6832340041
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,788 [wrapper] cleanup supervisor_pilot 30284 5919
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,798 [wrapper] Test setup, not cleaning
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,806 [wrapper] apfmon messages muted
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,815 [wrapper] ==== wrapper stdout END ====
2025-10-06 23:16:19 (21371): Guest Log: 2025-10-06 21:05:37,823 [wrapper] ==== wrapper stderr END ====
2025-10-06 23:16:19 (21371): Guest Log:  *** Error codes and diagnostics ***
2025-10-06 23:16:19 (21371): Guest Log:     "exeErrorCode": 0,
2025-10-06 23:16:19 (21371): Guest Log:     "exeErrorDiag": "",
2025-10-06 23:16:19 (21371): Guest Log:     "pilotErrorCode": 0,
2025-10-06 23:16:19 (21371): Guest Log:     "pilotErrorDiag": "",
2025-10-06 23:16:19 (21371): Guest Log:  *** Listing of results directory ***
2025-10-06 23:16:19 (21371): Guest Log: total 192584
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  6 04:54 pilot3.tar.gz
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  6 05:25 queuedata.json
2025-10-06 23:16:19 (21371): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  6 05:26 runpilot2-wrapper.sh
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 atlas atlas    565600 Oct  6 13:52 input.tar.gz
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 atlas atlas      6150 Oct  6 13:52 init_data.xml
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct  6 13:52 start_atlas.sh
2025-10-06 23:16:19 (21371): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  6 13:52 EVNT.46376901._003935.pool.root.1 -> /data/./ATLAS.root_0
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct  6 13:52 pandaJob.out
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas    975002 Oct  6 13:53 agis_schedconf.cvmfs.json
2025-10-06 23:16:19 (21371): Guest Log: drwx------. 4 atlas atlas      4096 Oct  6 13:54 pilot3
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas 185808240 Oct  6 21:04 HITS.46376905._106185.pool.root.1
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas      1027 Oct  6 21:04 memory_monitor_summary.json
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas        95 Oct  6 21:04 pilot_heartbeat.json
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  6 21:04 agis_ddmendpoints.agis.ALL.json
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas    516950 Oct  6 21:04 log.46376905._106185.job.log.tgz.1
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas      7811 Oct  6 21:05 heartbeat.json
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas      4612 Oct  6 21:05 pilotlog.txt
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas   3273348 Oct  6 21:05 log.46376905._106185.job.log.1
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas       357 Oct  6 21:05 output.list
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  6 21:05 runtime_log
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas   3809280 Oct  6 21:05 result.tar.gz
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 atlas atlas      8649 Oct  6 21:05 runtime_log.err
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas       662 Oct  6 21:05 AhMMDmfusP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmajSNDmPwPTMo.diag
2025-10-06 23:16:19 (21371): Guest Log: Looking for outputfile HITS.46376905._106185.pool.root.1
2025-10-06 23:16:19 (21371): Guest Log: HITS file was successfully produced
2025-10-06 23:16:19 (21371): Guest Log: -rw-------. 1 atlas atlas 185808240 Oct  6 21:04 /home/atlas/RunAtlas/HITS.46376905._106185.pool.root.1
2025-10-06 23:16:19 (21371): Guest Log: Successfully finished the ATLAS job!
2025-10-06 23:16:19 (21371): Guest Log: Copying the results back to the shared directory!
2025-10-06 23:16:19 (21371): Guest Log:  *** Contents of shared directory: ***
2025-10-06 23:16:19 (21371): Guest Log: total 214060
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 root root 214787704 Oct  6 13:51 ATLAS.root_0
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 root root      6150 Oct  6 13:51 init_data.xml
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 root root    565600 Oct  6 13:51 input.tar.gz
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 root root   3809280 Oct  6  2025 result.tar.gz
2025-10-06 23:16:19 (21371): Guest Log: -rw-r--r--. 1 root root     15120 Oct  6 13:51 start_atlas.sh
2025-10-06 23:16:19 (21371): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-06 23:16:20 (21371): VM Completion File Detected.
2025-10-06 23:16:20 (21371): Powering off VM.
2025-10-06 23:16:21 (21371): Successfully stopped VM.
2025-10-06 23:16:21 (21371): Deregistering VM. (boinc_7bbc969fd87e4217, slot#0)
2025-10-06 23:16:21 (21371): Removing network bandwidth throttle group from VM.
2025-10-06 23:16:21 (21371): Removing VM from VirtualBox.
2025-10-06 23:16:26 (21371): called boinc_finish(0)

</stderr_txt>
]]>

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