Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:48:20 (2086333): wrapper (7.7.26015): starting
09:48:20 (2086333): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 09:48:20] Arguments: --nthreads 8
[2025-10-06 09:48:20] Threads: 8
[2025-10-06 09:48:20] Checking for CVMFS
[2025-10-06 09:48:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 09:48:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 09:48:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 09:48:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 09:48:21] 2.13.2.0 3269412 27167 234560 151399 2 468 37158277 40960000 63138 16776704 0 315905249 99.810 156905734 36690 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-06 09:48:21] CVMFS is ok
[2025-10-06 09:48:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 09:48:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 09:48:21] Further information can be found at the LHC@home message board.
[2025-10-06 09:48:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 09:48:21] Checking for apptainer binary...
[2025-10-06 09:48:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 09:48:21] Running /usr/bin/apptainer --version
[2025-10-06 09:48:21] apptainer version 1.4.2-1.el9
[2025-10-06 09:48:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 09:48:21] c8-16-2.aglt2.org
[2025-10-06 09:48:21] apptainer works
[2025-10-06 09:48:21] Set ATHENA_PROC_NUMBER=8
[2025-10-06 09:48:21] Set ATHENA_CORE_NUMBER=8
[2025-10-06 09:48:21] Starting ATLAS job with PandaID=6832256708
[2025-10-06 09:48:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 10:59:56]  *** The last 200 lines of the pilot log: ***
[2025-10-06 10:59:56] 2025-10-06 14:58:42,154 | INFO     | PID=2095401 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-06 10:59:56] 2025-10-06 14:58:42,154 | INFO     | .. there are 61 such processes running
[2025-10-06 10:59:56] 2025-10-06 14:58:43,155 | INFO     | time since job start (4201s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:58:43,609 | INFO     | monitor loop #276: job 0:6832256708 is in state 'finished'
[2025-10-06 10:59:56] 2025-10-06 14:58:43,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:59:56] 2025-10-06 14:58:45,162 | INFO     | time since job start (4203s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:58:46,117 | INFO     | monitor loop #277: job 0:6832256708 is in state 'finished'
[2025-10-06 10:59:56] 2025-10-06 14:58:46,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:59:56] 2025-10-06 14:58:47,169 | INFO     | time since job start (4205s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:58:48,627 | INFO     | monitor loop #278: job 0:6832256708 is in state 'finished'
[2025-10-06 10:59:56] 2025-10-06 14:58:48,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:59:56] 2025-10-06 14:58:49,177 | INFO     | time since job start (4207s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:58:51,148 | INFO     | monitor loop #279: job 0:6832256708 is in state 'finished'
[2025-10-06 10:59:56] 2025-10-06 14:58:51,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:59:56] 2025-10-06 14:58:51,186 | INFO     | time since job start (4209s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:58:53,191 | INFO     | time since job start (4211s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:58:53,655 | INFO     | monitor loop #280: job 0:6832256708 is in state 'finished'
[2025-10-06 10:59:56] 2025-10-06 14:58:53,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:59:56] 2025-10-06 14:58:55,200 | INFO     | time since job start (4213s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:58:56,161 | INFO     | monitor loop #281: job 0:6832256708 is in state 'finished'
[2025-10-06 10:59:56] 2025-10-06 14:58:56,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:59:56] 2025-10-06 14:58:57,206 | INFO     | time since job start (4215s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:58:58,666 | INFO     | monitor loop #282: job 0:6832256708 is in state 'finished'
[2025-10-06 10:59:56] 2025-10-06 14:58:58,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:59:56] 2025-10-06 14:58:59,219 | INFO     | time since job start (4217s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:59:01,174 | INFO     | monitor loop #283: job 0:6832256708 is in state 'finished'
[2025-10-06 10:59:56] 2025-10-06 14:59:01,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:59:56] 2025-10-06 14:59:01,226 | INFO     | time since job start (4219s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:59:03,233 | INFO     | time since job start (4221s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:59:03,722 | INFO     | monitor loop #284: job 0:6832256708 is in state 'finished'
[2025-10-06 10:59:56] 2025-10-06 14:59:03,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:59:56] 2025-10-06 14:59:06,216 | INFO     | PID=2095401 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 10:59:56] 2025-10-06 14:59:06,217 | INFO     | .. there are 61 such processes running
[2025-10-06 10:59:56] 2025-10-06 14:59:06,235 | INFO     | monitor loop #285: job 0:6832256708 is in state 'finished'
[2025-10-06 10:59:56] 2025-10-06 14:59:06,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-06 10:59:56] 2025-10-06 14:59:07,218 | INFO     | time since job start (4225s) is within the limit (172800.0s)
[2025-10-06 10:59:56] 2025-10-06 14:59:08,227 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-06 10:59:56] 2025-10-06 14:59:08,232 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3798.4648203124952
[2025-10-06 10:59:56] 2025-10-06 14:59:08,245 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6832256708/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 10:59:56] 2025-10-06 14:59:08,246 | INFO     | extracted standard info from prmon json
[2025-10-06 10:59:56] 2025-10-06 14:59:08,246 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 10:59:56] 2025-10-06 14:59:08,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 10:59:56] 2025-10-06 14:59:08,247 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 10:59:56] 2025-10-06 14:59:08,247 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | fitting pss+swap vs Time
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | sum of square deviations: 70359478.85245895
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | sum of deviations: 399435935.1967212
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | mean x: 1759760722.0491803
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | mean y: 2300511.9344262294
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | -- intersect: -9987990507.817863
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | intersect: -9987990507.817863
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | chi2: 0.003433019922141371
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | -- intersect: -9987990507.817863
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | current memory leak: 5.68 B/s (using 61 data points, chi2=0.00)
[2025-10-06 10:59:56] 2025-10-06 14:59:08,248 | INFO     | could have reported an average CPU frequency of 3794 MHz (6 samples)
[2025-10-06 10:59:56] 2025-10-06 14:59:08,249 | INFO     | ..............................
[2025-10-06 10:59:56] 2025-10-06 14:59:08,249 | INFO     | . Timing measurements:
[2025-10-06 10:59:56] 2025-10-06 14:59:08,249 | INFO     | . get job = 0 s
[2025-10-06 10:59:56] 2025-10-06 14:59:08,249 | INFO     | . initial setup = 2 s
[2025-10-06 10:59:56] 2025-10-06 14:59:08,249 | INFO     | . payload setup = 18 s
[2025-10-06 10:59:56] 2025-10-06 14:59:08,249 | INFO     | . stage-in = 0 s
[2025-10-06 10:59:56] 2025-10-06 14:59:08,249 | INFO     | . payload execution = 4136 s
[2025-10-06 10:59:56] 2025-10-06 14:59:08,249 | INFO     | . stage-out = 2 s
[2025-10-06 10:59:56] 2025-10-06 14:59:08,249 | INFO     | . log creation = 0 s
[2025-10-06 10:59:56] 2025-10-06 14:59:08,249 | INFO     | ..............................
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | 
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | job summary report
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | --------------------------------------------------
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | PanDA job id: 6832256708
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | task id: 46376905
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | errors: (none)
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | pilot state: finished 
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | transexitcode: 0
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | exeerrorcode: 0
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | exeerrordiag: 
[2025-10-06 10:59:56] 2025-10-06 14:59:08,669 | INFO     | exitcode: 0
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | exitmsg: OK
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | cpuconsumptiontime: 21170 s
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | nevents: 400
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | neventsw: 0
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | pid: 2118115
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | pgrp: 2118115
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | corecount: 8
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | event service: False
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | sizes: {0: 2348816, 11: 2348816, 12: 2349106, 21: 2349134, 4159: 2375171, 4162: 2384169, 4164: 2384353, 4194: 2384547}
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | --------------------------------------------------
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | 
[2025-10-06 10:59:56] 2025-10-06 14:59:08,670 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-06 10:59:56] 2025-10-06 14:59:08,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,808 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,808 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | job 6832256708 has completed (purged errors)
[2025-10-06 10:59:56] 2025-10-06 14:59:08,809 | INFO     | overall cleanup function is called
[2025-10-06 10:59:56] 2025-10-06 14:59:09,819 | INFO     | --- collectZombieJob: --- 10, [2118115]
[2025-10-06 10:59:56] 2025-10-06 14:59:09,819 | INFO     | zombie collector waiting for pid 2118115
[2025-10-06 10:59:56] 2025-10-06 14:59:09,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 10:59:56] 2025-10-06 14:59:09,819 | INFO     | collected zombie processes
[2025-10-06 10:59:56] 2025-10-06 14:59:09,819 | INFO     | will attempt to kill all subprocesses of pid=2118115
[2025-10-06 10:59:56] 2025-10-06 14:59:10,942 | INFO     | process IDs to be killed: [2118115] (in reverse order)
[2025-10-06 10:59:56] 2025-10-06 14:59:11,256 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 10:59:56] 2025-10-06 14:59:11,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 10:59:56] 2025-10-06 14:59:11,288 | INFO     | did not find any defunct processes belonging to 2118115
[2025-10-06 10:59:56] 2025-10-06 14:59:11,321 | INFO     | did not find any defunct processes belonging to 2118115
[2025-10-06 10:59:56] 2025-10-06 14:59:11,321 | INFO     | ready for new job
[2025-10-06 10:59:56] 2025-10-06 14:59:11,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 10:59:56] 2025-10-06 14:59:11,322 | INFO     | ***************************************
[2025-10-06 10:59:56] 2025-10-06 14:59:11,323 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 10:59:56] 2025-10-06 14:59:11,323 | INFO     | ***************************************
[2025-10-06 10:59:56] 2025-10-06 14:59:11,323 | INFO     | 
[2025-10-06 10:59:56] 2025-10-06 14:59:11,345 | INFO     | architecture information:
[2025-10-06 10:59:56] 2025-10-06 14:59:11,349 | INFO     | executing command: cat /etc/os-release
[2025-10-06 10:59:56] 2025-10-06 14:59:11,407 | INFO     | cat /etc/os-release:
[2025-10-06 10:59:56] NAME="CentOS Linux"
[2025-10-06 10:59:56] VERSION="7 (Core)"
[2025-10-06 10:59:56] ID="centos"
[2025-10-06 10:59:56] ID_LIKE="rhel fedora"
[2025-10-06 10:59:56] VERSION_ID="7"
[2025-10-06 10:59:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 10:59:56] ANSI_COLOR="0;31"
[2025-10-06 10:59:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 10:59:56] HOME_URL="https://www.centos.org/"
[2025-10-06 10:59:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 10:59:56] 
[2025-10-06 10:59:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 10:59:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 10:59:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 10:59:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 10:59:56] 
[2025-10-06 10:59:56] 2025-10-06 14:59:11,407 | INFO     | ***************************************
[2025-10-06 10:59:56] 2025-10-06 14:59:11,913 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-06 10:59:56] 2025-10-06 14:59:12,007 | INFO     | sufficient remaining disk space (167914766336 B)
[2025-10-06 10:59:56] 2025-10-06 14:59:12,007 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 10:59:56] 2025-10-06 14:59:12,007 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 10:59:56] 2025-10-06 14:59:12,007 | INFO     | update_server=False
[2025-10-06 10:59:56] 2025-10-06 14:59:12,007 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 10:59:56] 2025-10-06 14:59:12,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 10:59:56] 2025-10-06 14:59:12,213 | INFO     | all data control threads have been joined
[2025-10-06 10:59:56] 2025-10-06 14:59:12,238 | INFO     | all job control threads have been joined
[2025-10-06 10:59:56] 2025-10-06 14:59:12,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 10:59:56] 2025-10-06 14:59:12,264 | INFO     | aborting loop
[2025-10-06 10:59:56] 2025-10-06 14:59:12,521 | INFO     | all payload control threads have been joined
[2025-10-06 10:59:56] 2025-10-06 14:59:13,014 | INFO     | [job] retrieve thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:13,018 | INFO     | [payload] failed_post thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:13,219 | INFO     | [data] control thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:13,247 | INFO     | [job] control thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:13,270 | INFO     | [job] job monitor thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:13,326 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 10:59:56] 2025-10-06 14:59:13,527 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:13,537 | INFO     | [payload] control thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:13,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:13,919 | INFO     | [job] validate thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:13,928 | INFO     | [data] copytool_in thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:13,941 | INFO     | [payload] validate_post thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:14,015 | INFO     | [data] copytool_out thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:14,242 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:14,332 | INFO     | [job] queue monitor thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:14,434 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:15,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 10:59:56] 2025-10-06 14:59:19,482 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 10:59:56] 2025-10-06 14:59:42,166 | INFO     | PID=2095401 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 10:59:56] 2025-10-06 14:59:42,166 | INFO     | .. there are 61 such processes running
[2025-10-06 10:59:56] 2025-10-06 14:59:42,183 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 10:59:56] 2025-10-06 14:59:42,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 10:59:56] 2025-10-06 14:59:42,184 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 10:59:56] 2025-10-06 14:59:49,327 | INFO     | [monitor] cgroup control has ended
[2025-10-06 10:59:56] 2025-10-06 14:59:49,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313957156672)>', '<ExcThread(monitor, started 140313444194048)>']
[2025-10-06 10:59:56] 2025-10-06 14:59:50,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 10:59:56] 2025-10-06 14:59:50,233 | INFO     | [monitor] control thread has ended
[2025-10-06 10:59:56] 2025-10-06 14:59:54,994 | INFO     | all workflow threads have been joined
[2025-10-06 10:59:56] 2025-10-06 14:59:54,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 10:59:56] 2025-10-06 14:59:54,994 | INFO     | traces error code: 0
[2025-10-06 10:59:56] 2025-10-06 14:59:54,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 10:59:56] 2025-10-06 14:59:55,389 [wrapper] ==== pilot stdout END ====
[2025-10-06 10:59:56] 2025-10-06 14:59:55,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 10:59:56] 2025-10-06 14:59:55,468 [wrapper] pilotpid: 2095401
[2025-10-06 10:59:56] 2025-10-06 14:59:55,493 [wrapper] Pilot exit status: 0
[2025-10-06 10:59:56] 2025-10-06 14:59:55,639 [wrapper] pandaids: 6832256708
[2025-10-06 10:59:56] 2025-10-06 14:59:55,912 [wrapper] cleanup supervisor_pilot 2825021 2095402
[2025-10-06 10:59:56] 2025-10-06 14:59:55,915 [wrapper] Test setup, not cleaning
[2025-10-06 10:59:56] 2025-10-06 14:59:55,961 [wrapper] apfmon messages muted
[2025-10-06 10:59:56] 2025-10-06 14:59:56,007 [wrapper] ==== wrapper stdout END ====
[2025-10-06 10:59:56] 2025-10-06 14:59:56,049 [wrapper] ==== wrapper stderr END ====
[2025-10-06 10:59:56]  *** Error codes and diagnostics ***
[2025-10-06 10:59:56]     "exeErrorCode": 0,
[2025-10-06 10:59:56]     "exeErrorDiag": "",
[2025-10-06 10:59:56]     "pilotErrorCode": 0,
[2025-10-06 10:59:56]     "pilotErrorDiag": "",
[2025-10-06 10:59:56]  *** Listing of results directory ***
[2025-10-06 10:59:56] total 391500
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 22:02 pilot3.tar.gz
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 22:15 queuedata.json
[2025-10-06 10:59:56] -rwx------. 1 boincer umatlas     36292 Oct  5 22:16 runpilot2-wrapper.sh
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas       100 Oct  6 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 10:59:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  6 09:48 run_atlas
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas       105 Oct  6 09:48 job.xml
[2025-10-06 10:59:56] -rw-r--r--. 2 boincer umatlas 214080734 Oct  6 09:48 EVNT.46376901._003804.pool.root.1
[2025-10-06 10:59:56] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 09:48 start_atlas.sh
[2025-10-06 10:59:56] drwxrwx--x. 2 boincer umatlas      4096 Oct  6 09:48 shared
[2025-10-06 10:59:56] -rw-r--r--. 2 boincer umatlas    565609 Oct  6 09:48 input.tar.gz
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas         0 Oct  6 09:48 boinc_lockfile
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas      2519 Oct  6 09:48 pandaJob.out
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas    975002 Oct  6 09:48 agis_schedconf.cvmfs.json
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas   1560401 Oct  6 09:48 agis_ddmendpoints.agis.ALL.json
[2025-10-06 10:59:56] drwx------. 4 boincer umatlas      4096 Oct  6 09:48 pilot3
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas 181120265 Oct  6 10:57 HITS.46376905._102841.pool.root.1
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas       529 Oct  6 10:57 boinc_task_state.xml
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas      1034 Oct  6 10:58 memory_monitor_summary.json
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas    329288 Oct  6 10:58 log.46376905._102841.job.log.tgz.1
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas      7162 Oct  6 10:58 init_data.xml
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas      7775 Oct  6 10:59 heartbeat.json
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas        95 Oct  6 10:59 pilot_heartbeat.json
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas        27 Oct  6 10:59 wrapper_checkpoint.txt
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas      8192 Oct  6 10:59 boinc_mmap_file
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas      4825 Oct  6 10:59 pilotlog.txt
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas    577218 Oct  6 10:59 log.46376905._102841.job.log.1
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas       357 Oct  6 10:59 output.list
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas       620 Oct  6 10:59 runtime_log
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas    921600 Oct  6 10:59 result.tar.gz
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas      8698 Oct  6 10:59 runtime_log.err
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas       651 Oct  6 10:59 cruNDmkwpP8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1GIMDm2oKBYm.diag
[2025-10-06 10:59:56] -rw-r--r--. 1 boincer umatlas     22405 Oct  6 10:59 stderr.txt
[2025-10-06 10:59:56] HITS file was successfully produced:
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas 181120265 Oct  6 10:57 shared/HITS.pool.root.1
[2025-10-06 10:59:56]  *** Contents of shared directory: ***
[2025-10-06 10:59:56] total 387420
[2025-10-06 10:59:56] -rw-r--r--. 2 boincer umatlas 214080734 Oct  6 09:48 ATLAS.root_0
[2025-10-06 10:59:56] -rw-r--r--. 2 boincer umatlas     15120 Oct  6 09:48 start_atlas.sh
[2025-10-06 10:59:56] -rw-r--r--. 2 boincer umatlas    565609 Oct  6 09:48 input.tar.gz
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas 181120265 Oct  6 10:57 HITS.pool.root.1
[2025-10-06 10:59:56] -rw-------. 1 boincer umatlas    921600 Oct  6 10:59 result.tar.gz
10:59:58 (2086333): run_atlas exited; CPU time 21293.468648
10:59:58 (2086333): called boinc_finish(0)

</stderr_txt>
]]>

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