Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:13:02 (592987): wrapper (7.7.26015): starting
07:13:02 (592987): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 07:13:02] Arguments: --nthreads 12
[2025-10-06 07:13:02] Threads: 12
[2025-10-06 07:13:02] Checking for CVMFS
[2025-10-06 07:13:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 07:13:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 07:13:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 07:13:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 07:13:03] 2.11.5.0 2671 22592 219760 151399 0 289 35690546 45568001 20021 130560 0 206727816 99.882 71827526 21746 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 07:13:03] CVMFS is ok
[2025-10-06 07:13:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 07:13:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 07:13:03] Further information can be found at the LHC@home message board.
[2025-10-06 07:13:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 07:13:03] Checking for apptainer binary...
[2025-10-06 07:13:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 07:13:03] Running /usr/bin/apptainer --version
[2025-10-06 07:13:03] apptainer version 1.4.1-1.el9
[2025-10-06 07:13:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 07:13:04] wns0056.triumf.lcg
[2025-10-06 07:13:04] apptainer works
[2025-10-06 07:13:04] Set ATHENA_PROC_NUMBER=12
[2025-10-06 07:13:04] Set ATHENA_CORE_NUMBER=12
[2025-10-06 07:13:04] Starting ATLAS job with PandaID=6832635441
[2025-10-06 07:13:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 07:17:26]  *** The last 200 lines of the pilot log: ***
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | WARNING  | wrong length of table data, x=[1759760044.0], y=[2487.0] (must be same and length>=4)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | could have reported an average CPU frequency of 2678 MHz (4 samples)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | ..............................
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . Timing measurements:
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . get job = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . initial setup = 3 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . payload setup = 12 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . stage-in = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . payload execution = 28 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . stage-out = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . log creation = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | ..............................
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 07:17:26] 2025-10-06 14:16:37,576 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832635441/pilotlog.txt
[2025-10-06 07:17:26] 2025-10-06 14:16:37,590 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 07:17:26] - Log from pilotlog.txt -
[2025-10-06 07:17:26] 2025-10-06 14:16:37,573 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832635441/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | INFO     | extracted standard info from prmon json
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | WARNING  | wrong length of table data, x=[1759760044.0], y=[2487.0] (must be same and length>=4)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | could have reported an average CPU frequency of 2678 MHz (4 samples)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | ..............................
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . Timing measurements:
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . get job = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . initial setup = 3 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . payload setup = 12 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . stage-in = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . payload execution = 28 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . stage-out = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . log creation = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | ..............................
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 07:17:26] 2025-10-06 14:16:37,576 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832635441/pilotlog.txt
[2025-10-06 07:17:26] 2025-10-06 14:16:37,590 | WARNING  | 
[2025-10-06 07:17:26] [begin log extracts]
[2025-10-06 07:17:26] - Log from pilotlog.txt -
[2025-10-06 07:17:26] 2025-10-06 14:16:37,573 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832635441/memory_monitor_summary.json (trf name=prmon)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | INFO     | extracted standard info from prmon json
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 07:17:26] 2025-10-06 14:16:37,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | WARNING  | wrong length of table data, x=[1759760044.0], y=[2487.0] (must be same and length>=4)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | could have reported an average CPU frequency of 2678 MHz (4 samples)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | ..............................
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . Timing measurements:
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . get job = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . initial setup = 3 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . payload setup = 12 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . stage-in = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . payload execution = 28 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . stage-out = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | . log creation = 0 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | ..............................
[2025-10-06 07:17:26] 2025-10-06 14:16:37,575 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 07:17:26] 2025-10-06 14:16:37,576 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832635441/pilotlog.txt
[2025-10-06 07:17:26] [end log extracts]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,590 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,591 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 07:17:26] 2025-10-06 14:16:37,677 | INFO     | 
[2025-10-06 07:17:26] 2025-10-06 14:16:37,677 | INFO     | job summary report
[2025-10-06 07:17:26] 2025-10-06 14:16:37,677 | INFO     | --------------------------------------------------
[2025-10-06 07:17:26] 2025-10-06 14:16:37,677 | INFO     | PanDA job id: 6832635441
[2025-10-06 07:17:26] 2025-10-06 14:16:37,677 | INFO     | task id: 46376905
[2025-10-06 07:17:26] 2025-10-06 14:16:37,677 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 07:14:20,058 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 07:17:26] 2025-10-06 14:16:37,677 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | pilot state: failed 
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | transexitcode: 65
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | exeerrorcode: 65
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | exitcode: 65
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | cpuconsumptiontime: 17 s
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | nevents: 0
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | neventsw: 0
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | pid: 610770
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | pgrp: 610770
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | corecount: 12
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | event service: False
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | sizes: {0: 2348652, 1: 2348794, 9: 2349056, 11: 2349084, 45: 2376490, 48: 2376490, 175: 2376844}
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | --------------------------------------------------
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | 
[2025-10-06 07:17:26] 2025-10-06 14:16:37,678 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 07:17:26] 2025-10-06 14:16:37,700 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,700 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,700 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,700 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | job 6832635441 has completed (purged errors)
[2025-10-06 07:17:26] 2025-10-06 14:16:37,701 | INFO     | overall cleanup function is called
[2025-10-06 07:17:26] 2025-10-06 14:16:38,707 | INFO     | --- collectZombieJob: --- 10, [610770]
[2025-10-06 07:17:26] 2025-10-06 14:16:38,708 | INFO     | zombie collector waiting for pid 610770
[2025-10-06 07:17:26] 2025-10-06 14:16:38,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 07:17:26] 2025-10-06 14:16:38,708 | INFO     | collected zombie processes
[2025-10-06 07:17:26] 2025-10-06 14:16:38,708 | INFO     | will attempt to kill all subprocesses of pid=610770
[2025-10-06 07:17:26] 2025-10-06 14:16:38,977 | INFO     | process IDs to be killed: [610770] (in reverse order)
[2025-10-06 07:17:26] 2025-10-06 14:16:39,051 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 07:17:26] 2025-10-06 14:16:39,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 07:17:26] 2025-10-06 14:16:39,078 | INFO     | did not find any defunct processes belonging to 610770
[2025-10-06 07:17:26] 2025-10-06 14:16:39,088 | INFO     | did not find any defunct processes belonging to 610770
[2025-10-06 07:17:26] 2025-10-06 14:16:39,088 | INFO     | ready for new job
[2025-10-06 07:17:26] 2025-10-06 14:16:39,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 07:17:26] 2025-10-06 14:16:39,089 | INFO     | ***************************************
[2025-10-06 07:17:26] 2025-10-06 14:16:39,090 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 07:17:26] 2025-10-06 14:16:39,090 | INFO     | ***************************************
[2025-10-06 07:17:26] 2025-10-06 14:16:39,090 | INFO     | 
[2025-10-06 07:17:26] 2025-10-06 14:16:39,092 | INFO     | architecture information:
[2025-10-06 07:17:26] 2025-10-06 14:16:39,092 | INFO     | executing command: cat /etc/os-release
[2025-10-06 07:17:26] 2025-10-06 14:16:39,108 | INFO     | cat /etc/os-release:
[2025-10-06 07:17:26] NAME="CentOS Linux"
[2025-10-06 07:17:26] VERSION="7 (Core)"
[2025-10-06 07:17:26] ID="centos"
[2025-10-06 07:17:26] ID_LIKE="rhel fedora"
[2025-10-06 07:17:26] VERSION_ID="7"
[2025-10-06 07:17:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 07:17:26] ANSI_COLOR="0;31"
[2025-10-06 07:17:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 07:17:26] HOME_URL="https://www.centos.org/"
[2025-10-06 07:17:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 07:17:26] 
[2025-10-06 07:17:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 07:17:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 07:17:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 07:17:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 07:17:26] 
[2025-10-06 07:17:26] 2025-10-06 14:16:39,108 | INFO     | ***************************************
[2025-10-06 07:17:26] 2025-10-06 14:16:39,612 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 07:17:26] 2025-10-06 14:16:39,643 | INFO     | sufficient remaining disk space (2010990510080 B)
[2025-10-06 07:17:26] 2025-10-06 14:16:39,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 07:17:26] 2025-10-06 14:16:39,643 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 07:17:26] 2025-10-06 14:16:39,643 | INFO     | update_server=False
[2025-10-06 07:17:26] 2025-10-06 14:16:39,643 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 07:17:26] 2025-10-06 14:16:39,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 07:17:26] 2025-10-06 14:16:39,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 07:17:26] 2025-10-06 14:16:39,787 | INFO     | all payload control threads have been joined
[2025-10-06 07:17:26] 2025-10-06 14:16:39,930 | INFO     | all data control threads have been joined
[2025-10-06 07:17:26] 2025-10-06 14:16:40,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 07:17:26] 2025-10-06 14:16:40,174 | INFO     | aborting loop
[2025-10-06 07:17:26] 2025-10-06 14:16:40,650 | INFO     | [job] retrieve thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:40,651 | INFO     | [job] queue monitor thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:40,745 | INFO     | [data] copytool_in thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:40,792 | INFO     | [payload] control thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:40,884 | INFO     | all job control threads have been joined
[2025-10-06 07:17:26] 2025-10-06 14:16:40,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:40,936 | INFO     | [data] control thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:41,046 | INFO     | [job] validate thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:41,180 | INFO     | [job] job monitor thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:41,250 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:41,255 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:41,338 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:41,652 | INFO     | [data] copytool_out thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:41,889 | INFO     | [job] control thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:42,074 | INFO     | [payload] failed_post thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:42,239 | INFO     | [payload] validate_post thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:16:42,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 07:17:26] 2025-10-06 14:16:46,885 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 07:17:26] 2025-10-06 14:17:09,083 | INFO     | PID=599071 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 07:17:26] 2025-10-06 14:17:09,084 | INFO     | .. there are 35 such processes running
[2025-10-06 07:17:26] 2025-10-06 14:17:09,084 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 07:17:26] 2025-10-06 14:17:09,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 07:17:26] 2025-10-06 14:17:09,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 07:17:26] 2025-10-06 14:17:20,825 | INFO     | [monitor] cgroup control has ended
[2025-10-06 07:17:26] 2025-10-06 14:17:21,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140260575057728)>', '<ExcThread(monitor, started 140259069261568)>']
[2025-10-06 07:17:26] 2025-10-06 14:17:21,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 07:17:26] 2025-10-06 14:17:21,152 | INFO     | [monitor] control thread has ended
[2025-10-06 07:17:26] 2025-10-06 14:17:26,113 | INFO     | all workflow threads have been joined
[2025-10-06 07:17:26] 2025-10-06 14:17:26,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 07:17:26] 2025-10-06 14:17:26,114 | INFO     | traces error code: 0
[2025-10-06 07:17:26] 2025-10-06 14:17:26,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 07:17:26] 2025-10-06 14:17:26,242 [wrapper] ==== pilot stdout END ====
[2025-10-06 07:17:26] 2025-10-06 14:17:26,245 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 07:17:26] 2025-10-06 14:17:26,250 [wrapper] pilotpid: 599071
[2025-10-06 07:17:26] 2025-10-06 14:17:26,266 [wrapper] Pilot exit status: 0
[2025-10-06 07:17:26] 2025-10-06 14:17:26,288 [wrapper] pandaids: 6832635441
[2025-10-06 07:17:26] 2025-10-06 14:17:26,335 [wrapper] cleanup supervisor_pilot  599087 599072
[2025-10-06 07:17:26] 2025-10-06 14:17:26,337 [wrapper] Test setup, not cleaning
[2025-10-06 07:17:26] 2025-10-06 14:17:26,343 [wrapper] apfmon messages muted
[2025-10-06 07:17:26] 2025-10-06 14:17:26,345 [wrapper] ==== wrapper stdout END ====
[2025-10-06 07:17:26] 2025-10-06 14:17:26,347 [wrapper] ==== wrapper stderr END ====
[2025-10-06 07:17:26]  *** Error codes and diagnostics ***
[2025-10-06 07:17:26]     "exeErrorCode": 65,
[2025-10-06 07:17:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 07:17:26]     "pilotErrorCode": 1305,
[2025-10-06 07:17:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 07:17:26]  *** Listing of results directory ***
[2025-10-06 07:17:26] total 214752
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc    552446 Oct  6 04:27 pilot3.tar.gz
[2025-10-06 07:17:26] -rwx------. 1 boinc boinc     36292 Oct  6 04:38 runpilot2-wrapper.sh
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc      5112 Oct  6 04:38 queuedata.json
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc       100 Oct  6 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 07:17:26] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 07:13 run_atlas
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc       105 Oct  6 07:13 job.xml
[2025-10-06 07:17:26] -rw-r--r--. 2 boinc boinc 215809043 Oct  6 07:13 EVNT.46376901._004099.pool.root.1
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc      6593 Oct  6 07:13 init_data.xml
[2025-10-06 07:17:26] -rw-r--r--. 2 boinc boinc     15120 Oct  6 07:13 start_atlas.sh
[2025-10-06 07:17:26] drwxrwx--x. 2 boinc boinc      4096 Oct  6 07:13 shared
[2025-10-06 07:17:26] -rw-r--r--. 2 boinc boinc    565597 Oct  6 07:13 input.tar.gz
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc         0 Oct  6 07:13 boinc_lockfile
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc      2520 Oct  6 07:13 pandaJob.out
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc    975002 Oct  6 07:13 agis_schedconf.cvmfs.json
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc   1560401 Oct  6 07:13 agis_ddmendpoints.agis.ALL.json
[2025-10-06 07:17:26] drwx------. 4 boinc boinc      4096 Oct  6 07:13 pilot3
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc       522 Oct  6 07:14 boinc_task_state.xml
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc       959 Oct  6 07:14 memory_monitor_summary.json
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc     21265 Oct  6 07:14 log.46376905._110540.job.log.tgz.1
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc        95 Oct  6 07:16 pilot_heartbeat.json
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc      8383 Oct  6 07:16 heartbeat.json
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc      8192 Oct  6 07:17 boinc_mmap_file
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc        22 Oct  6 07:17 wrapper_checkpoint.txt
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc      4822 Oct  6 07:17 pilotlog.txt
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc     86532 Oct  6 07:17 log.46376905._110540.job.log.1
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc       188 Oct  6 07:17 output.list
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc       620 Oct  6 07:17 runtime_log
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc    122880 Oct  6 07:17 result.tar.gz
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc      8528 Oct  6 07:17 runtime_log.err
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc       647 Oct  6 07:17 rKAMDm2iyP8n9Rq4apOajLDm4fhM0noT9bVof3QYDm96IMDmMxMe1m.diag
[2025-10-06 07:17:26] -rw-r--r--. 1 boinc boinc     21763 Oct  6 07:17 stderr.txt
[2025-10-06 07:17:26] No HITS result produced
[2025-10-06 07:17:26]  *** Contents of shared directory: ***
[2025-10-06 07:17:26] total 211444
[2025-10-06 07:17:26] -rw-r--r--. 2 boinc boinc 215809043 Oct  6 07:13 ATLAS.root_0
[2025-10-06 07:17:26] -rw-r--r--. 2 boinc boinc     15120 Oct  6 07:13 start_atlas.sh
[2025-10-06 07:17:26] -rw-r--r--. 2 boinc boinc    565597 Oct  6 07:13 input.tar.gz
[2025-10-06 07:17:26] -rw-------. 1 boinc boinc    122880 Oct  6 07:17 result.tar.gz
07:17:27 (592987): run_atlas exited; CPU time 23.736147
07:17:27 (592987): called boinc_finish(0)

</stderr_txt>
]]>

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