Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:44:00 (828248): wrapper (7.7.26015): starting
06:44:00 (828248): wrapper: running run_atlas (--nthreads 8)
[2025-10-06 06:44:00] Arguments: --nthreads 8
[2025-10-06 06:44:00] Threads: 8
[2025-10-06 06:44:00] Checking for CVMFS
[2025-10-06 06:44:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 06:44:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 06:44:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 06:44:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 06:44:01] 2.11.3.0 2268 22563 222928 151399 1 195 35125046 45568001 14908 130560 0 126549883 99.832 63017262 25918 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-10-06 06:44:01] CVMFS is ok
[2025-10-06 06:44:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 06:44:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 06:44:01] Further information can be found at the LHC@home message board.
[2025-10-06 06:44:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 06:44:01] Checking for apptainer binary...
[2025-10-06 06:44:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 06:44:01] Running /usr/bin/apptainer --version
[2025-10-06 06:44:01] apptainer version 1.4.1-1.el9
[2025-10-06 06:44:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 06:44:01] wns0008.triumf.lcg
[2025-10-06 06:44:01] apptainer works
[2025-10-06 06:44:01] Set ATHENA_PROC_NUMBER=8
[2025-10-06 06:44:01] Set ATHENA_CORE_NUMBER=8
[2025-10-06 06:44:01] Starting ATLAS job with PandaID=6832635341
[2025-10-06 06:44:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 06:48:27]  *** The last 200 lines of the pilot log: ***
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | WARNING  | found no stored workdir sizes
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | WARNING  | wrong length of table data, x=[1759758296.0], y=[2078.0] (must be same and length>=4)
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-06 06:48:27] 2025-10-06 13:47:29,901 | INFO     | ..............................
[2025-10-06 06:48:27] 2025-10-06 13:47:29,901 | INFO     | . Timing measurements:
[2025-10-06 06:48:27] 2025-10-06 13:47:29,901 | INFO     | . get job = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . initial setup = 3 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . payload setup = 9 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . stage-in = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . payload execution = 25 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . stage-out = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . log creation = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | ..............................
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832635341/pilotlog.txt
[2025-10-06 06:48:27] 2025-10-06 13:47:30,042 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 06:48:27] - Log from pilotlog.txt -
[2025-10-06 06:48:27] 2025-10-06 13:47:29,899 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 06:48:27] 2025-10-06 13:47:29,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 06:48:27] 2025-10-06 13:47:29,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | WARNING  | found no stored workdir sizes
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | WARNING  | wrong length of table data, x=[1759758296.0], y=[2078.0] (must be same and length>=4)
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-06 06:48:27] 2025-10-06 13:47:29,901 | INFO     | ..............................
[2025-10-06 06:48:27] 2025-10-06 13:47:29,901 | INFO     | . Timing measurements:
[2025-10-06 06:48:27] 2025-10-06 13:47:29,901 | INFO     | . get job = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . initial setup = 3 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . payload setup = 9 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . stage-in = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . payload execution = 25 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . stage-out = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . log creation = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | ..............................
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832635341/pilotlog.txt
[2025-10-06 06:48:27] 2025-10-06 13:47:30,045 | WARNING  | 
[2025-10-06 06:48:27] [begin log extracts]
[2025-10-06 06:48:27] - Log from pilotlog.txt -
[2025-10-06 06:48:27] 2025-10-06 13:47:29,899 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 06:48:27] 2025-10-06 13:47:29,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 06:48:27] 2025-10-06 13:47:29,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | WARNING  | found no stored workdir sizes
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | WARNING  | wrong length of table data, x=[1759758296.0], y=[2078.0] (must be same and length>=4)
[2025-10-06 06:48:27] 2025-10-06 13:47:29,900 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-06 06:48:27] 2025-10-06 13:47:29,901 | INFO     | ..............................
[2025-10-06 06:48:27] 2025-10-06 13:47:29,901 | INFO     | . Timing measurements:
[2025-10-06 06:48:27] 2025-10-06 13:47:29,901 | INFO     | . get job = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . initial setup = 3 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . payload setup = 9 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . stage-in = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . payload execution = 25 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . stage-out = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | . log creation = 0 s
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | ..............................
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 06:48:27] 2025-10-06 13:47:29,921 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832635341/pilotlog.txt
[2025-10-06 06:48:27] [end log extracts]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,045 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 06:48:27] 2025-10-06 13:47:30,046 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 06:48:27] 2025-10-06 13:47:30,763 | INFO     | 
[2025-10-06 06:48:27] 2025-10-06 13:47:30,763 | INFO     | job summary report
[2025-10-06 06:48:27] 2025-10-06 13:47:30,763 | INFO     | --------------------------------------------------
[2025-10-06 06:48:27] 2025-10-06 13:47:30,763 | INFO     | PanDA job id: 6832635341
[2025-10-06 06:48:27] 2025-10-06 13:47:30,763 | INFO     | task id: 46376905
[2025-10-06 06:48:27] 2025-10-06 13:47:30,763 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 06:45:11,266 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 06:48:27] 2025-10-06 13:47:30,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | pilot state: failed 
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | transexitcode: 65
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | exeerrorcode: 65
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | exitcode: 65
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | cpuconsumptiontime: 17 s
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | nevents: 0
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | neventsw: 0
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | pid: 845774
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | pgrp: 845774
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | corecount: 8
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | event service: False
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | sizes: {0: 2348816, 8: 2349078, 11: 2349106, 39: 2372246, 40: 2376538, 41: 2376566, 170: 2376860}
[2025-10-06 06:48:27] 2025-10-06 13:47:30,764 | INFO     | --------------------------------------------------
[2025-10-06 06:48:27] 2025-10-06 13:47:30,765 | INFO     | 
[2025-10-06 06:48:27] 2025-10-06 13:47:30,765 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 06:48:27] 2025-10-06 13:47:30,900 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,902 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 06:48:27] 2025-10-06 13:47:30,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,902 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 06:48:27] 2025-10-06 13:47:30,902 | INFO     | job 6832635341 has completed (purged errors)
[2025-10-06 06:48:27] 2025-10-06 13:47:30,902 | INFO     | overall cleanup function is called
[2025-10-06 06:48:27] 2025-10-06 13:47:31,931 | INFO     | --- collectZombieJob: --- 10, [845774]
[2025-10-06 06:48:27] 2025-10-06 13:47:31,931 | INFO     | zombie collector waiting for pid 845774
[2025-10-06 06:48:27] 2025-10-06 13:47:31,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 06:48:27] 2025-10-06 13:47:31,931 | INFO     | collected zombie processes
[2025-10-06 06:48:27] 2025-10-06 13:47:31,931 | INFO     | will attempt to kill all subprocesses of pid=845774
[2025-10-06 06:48:27] 2025-10-06 13:47:32,239 | INFO     | process IDs to be killed: [845774] (in reverse order)
[2025-10-06 06:48:27] 2025-10-06 13:47:32,299 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 06:48:27] 2025-10-06 13:47:32,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 06:48:27] 2025-10-06 13:47:32,322 | INFO     | did not find any defunct processes belonging to 845774
[2025-10-06 06:48:27] 2025-10-06 13:47:32,346 | INFO     | did not find any defunct processes belonging to 845774
[2025-10-06 06:48:27] 2025-10-06 13:47:32,346 | INFO     | ready for new job
[2025-10-06 06:48:27] 2025-10-06 13:47:32,346 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 06:48:27] 2025-10-06 13:47:32,348 | INFO     | ***************************************
[2025-10-06 06:48:27] 2025-10-06 13:47:32,348 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 06:48:27] 2025-10-06 13:47:32,348 | INFO     | ***************************************
[2025-10-06 06:48:27] 2025-10-06 13:47:32,348 | INFO     | 
[2025-10-06 06:48:27] 2025-10-06 13:47:32,349 | INFO     | architecture information:
[2025-10-06 06:48:27] 2025-10-06 13:47:32,366 | INFO     | executing command: cat /etc/os-release
[2025-10-06 06:48:27] 2025-10-06 13:47:32,393 | INFO     | cat /etc/os-release:
[2025-10-06 06:48:27] NAME="CentOS Linux"
[2025-10-06 06:48:27] VERSION="7 (Core)"
[2025-10-06 06:48:27] ID="centos"
[2025-10-06 06:48:27] ID_LIKE="rhel fedora"
[2025-10-06 06:48:27] VERSION_ID="7"
[2025-10-06 06:48:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 06:48:27] ANSI_COLOR="0;31"
[2025-10-06 06:48:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 06:48:27] HOME_URL="https://www.centos.org/"
[2025-10-06 06:48:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 06:48:27] 
[2025-10-06 06:48:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 06:48:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 06:48:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 06:48:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 06:48:27] 
[2025-10-06 06:48:27] 2025-10-06 13:47:32,393 | INFO     | ***************************************
[2025-10-06 06:48:27] 2025-10-06 13:47:32,902 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 06:48:27] 2025-10-06 13:47:32,990 | INFO     | sufficient remaining disk space (1384343666688 B)
[2025-10-06 06:48:27] 2025-10-06 13:47:32,990 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 06:48:27] 2025-10-06 13:47:32,991 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 06:48:27] 2025-10-06 13:47:32,991 | INFO     | update_server=False
[2025-10-06 06:48:27] 2025-10-06 13:47:32,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 06:48:27] 2025-10-06 13:47:32,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 06:48:27] 2025-10-06 13:47:32,991 | INFO     | aborting loop
[2025-10-06 06:48:27] 2025-10-06 13:47:33,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 06:48:27] 2025-10-06 13:47:33,432 | INFO     | all data control threads have been joined
[2025-10-06 06:48:27] 2025-10-06 13:47:33,761 | INFO     | all payload control threads have been joined
[2025-10-06 06:48:27] 2025-10-06 13:47:33,976 | INFO     | all job control threads have been joined
[2025-10-06 06:48:27] 2025-10-06 13:47:33,996 | INFO     | [job] job monitor thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:33,997 | INFO     | [job] retrieve thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:34,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 06:48:27] 2025-10-06 13:47:34,169 | INFO     | [payload] validate_post thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:34,321 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:34,321 | INFO     | [data] copytool_in thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:34,438 | INFO     | [data] control thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:34,767 | INFO     | [payload] control thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:34,982 | INFO     | [job] control thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:35,041 | INFO     | [job] validate thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:35,045 | INFO     | [payload] failed_post thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:35,107 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:35,233 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:35,319 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:35,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 06:48:27] 2025-10-06 13:47:35,377 | INFO     | [data] copytool_out thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:36,329 | INFO     | [job] queue monitor thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:47:38,033 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 06:48:27] 2025-10-06 13:48:02,387 | INFO     | PID=832968 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 06:48:27] 2025-10-06 13:48:02,387 | INFO     | .. there are 26 such processes running
[2025-10-06 06:48:27] 2025-10-06 13:48:02,388 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 06:48:27] 2025-10-06 13:48:02,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 06:48:27] 2025-10-06 13:48:02,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 06:48:27] 2025-10-06 13:48:20,571 | INFO     | [monitor] cgroup control has ended
[2025-10-06 06:48:27] 2025-10-06 13:48:22,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413591684928)>', '<ExcThread(monitor, started 140412681451264)>']
[2025-10-06 06:48:27] 2025-10-06 13:48:22,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 06:48:27] 2025-10-06 13:48:22,520 | INFO     | [monitor] control thread has ended
[2025-10-06 06:48:27] 2025-10-06 13:48:27,405 | INFO     | all workflow threads have been joined
[2025-10-06 06:48:27] 2025-10-06 13:48:27,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 06:48:27] 2025-10-06 13:48:27,405 | INFO     | traces error code: 0
[2025-10-06 06:48:27] 2025-10-06 13:48:27,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 06:48:27] 2025-10-06 13:48:27,506 [wrapper] ==== pilot stdout END ====
[2025-10-06 06:48:27] 2025-10-06 13:48:27,508 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 06:48:27] 2025-10-06 13:48:27,509 [wrapper] pilotpid: 832968
[2025-10-06 06:48:27] 2025-10-06 13:48:27,511 [wrapper] Pilot exit status: 0
[2025-10-06 06:48:27] 2025-10-06 13:48:27,526 [wrapper] pandaids: 6832635341
[2025-10-06 06:48:27] 2025-10-06 13:48:27,563 [wrapper] cleanup supervisor_pilot  833032 832969
[2025-10-06 06:48:27] 2025-10-06 13:48:27,565 [wrapper] Test setup, not cleaning
[2025-10-06 06:48:27] 2025-10-06 13:48:27,567 [wrapper] apfmon messages muted
[2025-10-06 06:48:27] 2025-10-06 13:48:27,569 [wrapper] ==== wrapper stdout END ====
[2025-10-06 06:48:27] 2025-10-06 13:48:27,570 [wrapper] ==== wrapper stderr END ====
[2025-10-06 06:48:27]  *** Error codes and diagnostics ***
[2025-10-06 06:48:27]     "exeErrorCode": 65,
[2025-10-06 06:48:27]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 06:48:27]     "pilotErrorCode": 1305,
[2025-10-06 06:48:27]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 06:48:27]  *** Listing of results directory ***
[2025-10-06 06:48:27] total 214936
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc    552446 Oct  6 04:27 pilot3.tar.gz
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc      5112 Oct  6 04:29 queuedata.json
[2025-10-06 06:48:27] -rwx------. 1 boinc boinc     36292 Oct  6 04:30 runpilot2-wrapper.sh
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc       100 Oct  6 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 06:48:27] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 06:44 run_atlas
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc       105 Oct  6 06:44 job.xml
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc      6443 Oct  6 06:44 init_data.xml
[2025-10-06 06:48:27] -rw-r--r--. 2 boinc boinc 216001128 Oct  6 06:44 EVNT.46376901._004095.pool.root.1
[2025-10-06 06:48:27] -rw-r--r--. 2 boinc boinc     15120 Oct  6 06:44 start_atlas.sh
[2025-10-06 06:48:27] drwxrwx--x. 2 boinc boinc      4096 Oct  6 06:44 shared
[2025-10-06 06:48:27] -rw-r--r--. 2 boinc boinc    565605 Oct  6 06:44 input.tar.gz
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc         0 Oct  6 06:44 boinc_lockfile
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc      2520 Oct  6 06:44 pandaJob.out
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc    975002 Oct  6 06:44 agis_schedconf.cvmfs.json
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc   1560401 Oct  6 06:44 agis_ddmendpoints.agis.ALL.json
[2025-10-06 06:48:27] drwx------. 4 boinc boinc      4096 Oct  6 06:44 pilot3
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc       522 Oct  6 06:45 boinc_task_state.xml
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc       969 Oct  6 06:45 memory_monitor_summary.json
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc     21207 Oct  6 06:45 log.46376905._110440.job.log.tgz.1
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc        95 Oct  6 06:47 pilot_heartbeat.json
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc      8386 Oct  6 06:47 heartbeat.json
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc        22 Oct  6 06:48 wrapper_checkpoint.txt
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc      8192 Oct  6 06:48 boinc_mmap_file
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc      4822 Oct  6 06:48 pilotlog.txt
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc     85199 Oct  6 06:48 log.46376905._110440.job.log.1
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc       188 Oct  6 06:48 output.list
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc       620 Oct  6 06:48 runtime_log
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc    122880 Oct  6 06:48 result.tar.gz
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc      8526 Oct  6 06:48 runtime_log.err
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc       644 Oct  6 06:48 GxULDmYbyP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmH6IMDmcVyIym.diag
[2025-10-06 06:48:27] -rw-r--r--. 1 boinc boinc     21615 Oct  6 06:48 stderr.txt
[2025-10-06 06:48:27] No HITS result produced
[2025-10-06 06:48:27]  *** Contents of shared directory: ***
[2025-10-06 06:48:27] total 211632
[2025-10-06 06:48:27] -rw-r--r--. 2 boinc boinc 216001128 Oct  6 06:44 ATLAS.root_0
[2025-10-06 06:48:27] -rw-r--r--. 2 boinc boinc     15120 Oct  6 06:44 start_atlas.sh
[2025-10-06 06:48:27] -rw-r--r--. 2 boinc boinc    565605 Oct  6 06:44 input.tar.gz
[2025-10-06 06:48:27] -rw-------. 1 boinc boinc    122880 Oct  6 06:48 result.tar.gz
06:48:29 (828248): run_atlas exited; CPU time 24.924251
06:48:29 (828248): called boinc_finish(0)

</stderr_txt>
]]>

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