Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
18:09:12 (844889): wrapper (7.7.26015): starting
18:09:12 (844889): wrapper: running run_atlas (--nthreads 2)
[2025-10-06 18:09:12] Arguments: --nthreads 2
[2025-10-06 18:09:12] Threads: 2
[2025-10-06 18:09:12] Checking for CVMFS
[2025-10-06 18:09:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 18:09:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 18:09:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 18:09:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 18:09:13] 2.11.0.0 3910605 8660 61544 151404 3 11 4869727 6144001 0 130560 0 18937988 99.997 285347 483 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-06 18:09:13] CVMFS is ok
[2025-10-06 18:09:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 18:09:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-06 18:09:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-06 18:09:13] Further information can be found at the LHC@home message board.
[2025-10-06 18:09:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 18:09:13] Checking for apptainer binary...
[2025-10-06 18:09:13] apptainer is not installed, using version from CVMFS
[2025-10-06 18:09:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 18:09:13] mordor
[2025-10-06 18:09:13] apptainer works
[2025-10-06 18:09:13] Set ATHENA_PROC_NUMBER=2
[2025-10-06 18:09:13] Set ATHENA_CORE_NUMBER=2
[2025-10-06 18:09:13] Starting ATLAS job with PandaID=6832199574
[2025-10-06 18:09:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 23:17:13]  *** The last 200 lines of the pilot log: ***
[2025-10-06 23:17:14] 2025-10-06 21:16:42,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 23:17:14] 2025-10-06 21:16:42,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 23:17:14] 2025-10-06 21:16:42,271 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 23:17:14] 2025-10-06 21:16:42,274 | INFO     | fitting pss+swap vs Time
[2025-10-06 23:17:14] 2025-10-06 21:16:42,275 | INFO     | sum of square deviations: 8540720135.5
[2025-10-06 23:17:14] 2025-10-06 21:16:42,277 | INFO     | sum of deviations: 24852565527.00001
[2025-10-06 23:17:14] 2025-10-06 21:16:42,277 | INFO     | mean x: 1759776162.5
[2025-10-06 23:17:14] 2025-10-06 21:16:42,277 | INFO     | mean y: 2264966.728476821
[2025-10-06 23:17:14] 2025-10-06 21:16:42,277 | INFO     | -- intersect: -5118492030.049465
[2025-10-06 23:17:14] 2025-10-06 21:16:42,277 | INFO     | intersect: -5118492030.049465
[2025-10-06 23:17:14] 2025-10-06 21:16:42,277 | INFO     | chi2: 1.1560360580223186
[2025-10-06 23:17:14] 2025-10-06 21:16:42,277 | INFO     | sum of square deviations: 8123493708.0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,279 | INFO     | sum of deviations: 24613177858.999996
[2025-10-06 23:17:14] 2025-10-06 21:16:42,279 | INFO     | mean x: 1759776010.0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,279 | INFO     | mean y: 2264879.2255892255
[2025-10-06 23:17:14] 2025-10-06 21:16:42,279 | INFO     | -- intersect: -5329638053.557647
[2025-10-06 23:17:14] 2025-10-06 21:16:42,279 | INFO     | intersect: -5329638053.557647
[2025-10-06 23:17:14] 2025-10-06 21:16:42,280 | INFO     | chi2: 1.156183274036515
[2025-10-06 23:17:14] 2025-10-06 21:16:42,280 | INFO     | current chi2=1.156183274036515 (change=-0.01273455210802648 %)
[2025-10-06 23:17:14] 2025-10-06 21:16:42,280 | INFO     | right removable region: 296
[2025-10-06 23:17:14] 2025-10-06 21:16:42,280 | INFO     | sum of square deviations: 8123493708.0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,282 | INFO     | sum of deviations: 6174113292.000001
[2025-10-06 23:17:14] 2025-10-06 21:16:42,282 | INFO     | mean x: 1759776315.0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,282 | INFO     | mean y: 2271662.2794612795
[2025-10-06 23:17:14] 2025-10-06 21:16:42,282 | INFO     | -- intersect: -1335214243.1614935
[2025-10-06 23:17:14] 2025-10-06 21:16:42,282 | INFO     | intersect: -1335214243.1614935
[2025-10-06 23:17:14] 2025-10-06 21:16:42,282 | INFO     | chi2: 0.06282745743614118
[2025-10-06 23:17:14] 2025-10-06 21:16:42,282 | INFO     | current chi2=0.06282745743614118 (change=94.56526835818401 %)
[2025-10-06 23:17:14] 2025-10-06 21:16:42,283 | INFO     | sum of square deviations: 7720081493.0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,284 | INFO     | sum of deviations: 11939670635.500002
[2025-10-06 23:17:14] 2025-10-06 21:16:42,284 | INFO     | mean x: 1759776467.5
[2025-10-06 23:17:14] 2025-10-06 21:16:42,285 | INFO     | mean y: 2269511.1198630137
[2025-10-06 23:17:14] 2025-10-06 21:16:42,285 | INFO     | -- intersect: -2719353496.759657
[2025-10-06 23:17:14] 2025-10-06 21:16:42,285 | INFO     | intersect: -2719353496.759657
[2025-10-06 23:17:14] 2025-10-06 21:16:42,285 | INFO     | chi2: 0.003643573023755768
[2025-10-06 23:17:14] 2025-10-06 21:16:42,285 | INFO     | current chi2=0.003643573023755768 (change=94.20066771369962 %)
[2025-10-06 23:17:14] 2025-10-06 21:16:42,285 | INFO     | sum of square deviations: 7330250928.0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,287 | INFO     | sum of deviations: 10545681707.999994
[2025-10-06 23:17:14] 2025-10-06 21:16:42,287 | INFO     | mean x: 1759776620.0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,287 | INFO     | mean y: 2270056.2891986063
[2025-10-06 23:17:14] 2025-10-06 21:16:42,287 | INFO     | -- intersect: -2529436469.7196555
[2025-10-06 23:17:14] 2025-10-06 21:16:42,287 | INFO     | intersect: -2529436469.7196555
[2025-10-06 23:17:14] 2025-10-06 21:16:42,287 | INFO     | chi2: 0.003310485391827487
[2025-10-06 23:17:14] 2025-10-06 21:16:42,288 | INFO     | current chi2=0.003310485391827487 (change=9.14178554283336 %)
[2025-10-06 23:17:14] 2025-10-06 21:16:42,288 | INFO     | left removable region: 30
[2025-10-06 23:17:14] 2025-10-06 21:16:42,288 | INFO     | sum of square deviations: 5836025702.5
[2025-10-06 23:17:14] 2025-10-06 21:16:42,289 | INFO     | sum of deviations: 7842754262.0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,289 | INFO     | mean x: 1759776894.5
[2025-10-06 23:17:14] 2025-10-06 21:16:42,289 | INFO     | mean y: 2271189.5939849624
[2025-10-06 23:17:14] 2025-10-06 21:16:42,289 | INFO     | -- intersect: -2362608343.680997
[2025-10-06 23:17:14] 2025-10-06 21:16:42,290 | INFO     | intersect: -2362608343.680997
[2025-10-06 23:17:14] 2025-10-06 21:16:42,290 | INFO     | chi2: 0.002754654322373239
[2025-10-06 23:17:14] 2025-10-06 21:16:42,290 | INFO     | -- intersect: -2362608343.680997
[2025-10-06 23:17:14] 2025-10-06 21:16:42,290 | INFO     | current memory leak: 1.34 B/s (using 266 data points, chi2=0.00)
[2025-10-06 23:17:14] 2025-10-06 21:16:42,290 | INFO     | could have reported an average CPU frequency of 2979 MHz (14 samples)
[2025-10-06 23:17:14] 2025-10-06 21:16:42,290 | INFO     | ..............................
[2025-10-06 23:17:14] 2025-10-06 21:16:42,290 | INFO     | . Timing measurements:
[2025-10-06 23:17:14] 2025-10-06 21:16:42,291 | INFO     | . get job = 0 s
[2025-10-06 23:17:14] 2025-10-06 21:16:42,291 | INFO     | . initial setup = 1 s
[2025-10-06 23:17:14] 2025-10-06 21:16:42,291 | INFO     | . payload setup = 3 s
[2025-10-06 23:17:14] 2025-10-06 21:16:42,291 | INFO     | . stage-in = 0 s
[2025-10-06 23:17:14] 2025-10-06 21:16:42,291 | INFO     | . payload execution = 18414 s
[2025-10-06 23:17:14] 2025-10-06 21:16:42,291 | INFO     | . stage-out = 1 s
[2025-10-06 23:17:14] 2025-10-06 21:16:42,291 | INFO     | . log creation = 0 s
[2025-10-06 23:17:14] 2025-10-06 21:16:42,291 | INFO     | ..............................
[2025-10-06 23:17:14] 2025-10-06 21:16:42,533 | INFO     | 
[2025-10-06 23:17:14] 2025-10-06 21:16:42,534 | INFO     | job summary report
[2025-10-06 23:17:14] 2025-10-06 21:16:42,534 | INFO     | --------------------------------------------------
[2025-10-06 23:17:14] 2025-10-06 21:16:42,534 | INFO     | PanDA job id: 6832199574
[2025-10-06 23:17:14] 2025-10-06 21:16:42,534 | INFO     | task id: 46376905
[2025-10-06 23:17:14] 2025-10-06 21:16:42,534 | INFO     | errors: (none)
[2025-10-06 23:17:14] 2025-10-06 21:16:42,534 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 23:17:14] 2025-10-06 21:16:42,535 | INFO     | pilot state: finished 
[2025-10-06 23:17:14] 2025-10-06 21:16:42,535 | INFO     | transexitcode: 0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,535 | INFO     | exeerrorcode: 0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,535 | INFO     | exeerrordiag: 
[2025-10-06 23:17:14] 2025-10-06 21:16:42,535 | INFO     | exitcode: 0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,535 | INFO     | exitmsg: OK
[2025-10-06 23:17:14] 2025-10-06 21:16:42,535 | INFO     | cpuconsumptiontime: 35910 s
[2025-10-06 23:17:14] 2025-10-06 21:16:42,535 | INFO     | nevents: 400
[2025-10-06 23:17:14] 2025-10-06 21:16:42,536 | INFO     | neventsw: 0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,536 | INFO     | pid: 854862
[2025-10-06 23:17:14] 2025-10-06 21:16:42,536 | INFO     | pgrp: 854862
[2025-10-06 23:17:14] 2025-10-06 21:16:42,536 | INFO     | corecount: 2
[2025-10-06 23:17:14] 2025-10-06 21:16:42,536 | INFO     | event service: False
[2025-10-06 23:17:14] 2025-10-06 21:16:42,536 | INFO     | sizes: {0: 2348823, 3: 2349085, 11: 2349113, 18421: 2381692, 18422: 2381691, 18423: 2390759, 18424: 2390943, 18428: 2391137}
[2025-10-06 23:17:14] 2025-10-06 21:16:42,536 | INFO     | --------------------------------------------------
[2025-10-06 23:17:14] 2025-10-06 21:16:42,537 | INFO     | 
[2025-10-06 23:17:14] 2025-10-06 21:16:42,537 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-06 23:17:14] 2025-10-06 21:16:42,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,554 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,554 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,554 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 23:17:14] 2025-10-06 21:16:42,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,556 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 23:17:14] 2025-10-06 21:16:42,556 | INFO     | job 6832199574 has completed (purged errors)
[2025-10-06 23:17:14] 2025-10-06 21:16:42,556 | INFO     | overall cleanup function is called
[2025-10-06 23:17:14] 2025-10-06 21:16:43,563 | INFO     | --- collectZombieJob: --- 10, [854862]
[2025-10-06 23:17:14] 2025-10-06 21:16:43,563 | INFO     | zombie collector waiting for pid 854862
[2025-10-06 23:17:14] 2025-10-06 21:16:43,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 23:17:14] 2025-10-06 21:16:43,563 | INFO     | collected zombie processes
[2025-10-06 23:17:14] 2025-10-06 21:16:43,563 | INFO     | will attempt to kill all subprocesses of pid=854862
[2025-10-06 23:17:14] 2025-10-06 21:16:43,621 | INFO     | process IDs to be killed: [854862] (in reverse order)
[2025-10-06 23:17:14] 2025-10-06 21:16:43,647 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 23:17:14] 2025-10-06 21:16:43,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 23:17:14] 2025-10-06 21:16:43,649 | INFO     | did not find any defunct processes belonging to 854862
[2025-10-06 23:17:14] 2025-10-06 21:16:43,650 | INFO     | did not find any defunct processes belonging to 854862
[2025-10-06 23:17:14] 2025-10-06 21:16:43,650 | INFO     | ready for new job
[2025-10-06 23:17:14] 2025-10-06 21:16:43,650 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 23:17:14] 2025-10-06 21:16:43,651 | INFO     | ***************************************
[2025-10-06 23:17:14] 2025-10-06 21:16:43,651 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 23:17:14] 2025-10-06 21:16:43,651 | INFO     | ***************************************
[2025-10-06 23:17:14] 2025-10-06 21:16:43,652 | INFO     | 
[2025-10-06 23:17:14] 2025-10-06 21:16:43,671 | INFO     | architecture information:
[2025-10-06 23:17:14] 2025-10-06 21:16:43,671 | INFO     | executing command: cat /etc/os-release
[2025-10-06 23:17:14] 2025-10-06 21:16:43,682 | INFO     | cat /etc/os-release:
[2025-10-06 23:17:14] NAME="CentOS Linux"
[2025-10-06 23:17:14] VERSION="7 (Core)"
[2025-10-06 23:17:14] ID="centos"
[2025-10-06 23:17:14] ID_LIKE="rhel fedora"
[2025-10-06 23:17:14] VERSION_ID="7"
[2025-10-06 23:17:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 23:17:14] ANSI_COLOR="0;31"
[2025-10-06 23:17:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 23:17:14] HOME_URL="https://www.centos.org/"
[2025-10-06 23:17:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 23:17:14] 
[2025-10-06 23:17:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 23:17:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 23:17:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 23:17:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 23:17:14] 
[2025-10-06 23:17:14] 2025-10-06 21:16:43,682 | INFO     | ***************************************
[2025-10-06 23:17:14] 2025-10-06 21:16:44,185 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-06 23:17:14] 2025-10-06 21:16:44,198 | INFO     | sufficient remaining disk space (418486681600 B)
[2025-10-06 23:17:14] 2025-10-06 21:16:44,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 23:17:14] 2025-10-06 21:16:44,198 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 23:17:14] 2025-10-06 21:16:44,199 | INFO     | update_server=False
[2025-10-06 23:17:14] 2025-10-06 21:16:44,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 23:17:14] 2025-10-06 21:16:44,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 23:17:14] 2025-10-06 21:16:44,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 23:17:14] 2025-10-06 21:16:44,282 | INFO     | aborting loop
[2025-10-06 23:17:14] 2025-10-06 21:16:44,361 | INFO     | all job control threads have been joined
[2025-10-06 23:17:14] 2025-10-06 21:16:44,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 23:17:14] 2025-10-06 21:16:44,699 | INFO     | all data control threads have been joined
[2025-10-06 23:17:14] 2025-10-06 21:16:44,838 | INFO     | all payload control threads have been joined
[2025-10-06 23:17:14] 2025-10-06 21:16:45,203 | INFO     | [job] retrieve thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:45,205 | INFO     | [job] queue monitor thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:45,256 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:45,287 | INFO     | [job] job monitor thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:45,295 | INFO     | [data] copytool_in thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:45,366 | INFO     | [job] control thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:45,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 23:17:14] 2025-10-06 21:16:45,499 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:45,569 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:45,701 | INFO     | [data] control thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:45,843 | INFO     | [payload] control thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:46,112 | INFO     | [job] validate thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:46,540 | INFO     | [payload] validate_post thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:46,564 | INFO     | [payload] failed_post thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:47,387 | INFO     | [data] copytool_out thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:48,539 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:51,029 | INFO     | [monitor] cgroup control has ended
[2025-10-06 23:17:14] 2025-10-06 21:16:54,254 | INFO     | job.realtimelogging is not enabled
[2025-10-06 23:17:14] 2025-10-06 21:16:55,259 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 23:17:14] 2025-10-06 21:16:56,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084836349760)>', '<ExcThread(monitor, started 140084166776576)>']
[2025-10-06 23:17:14] 2025-10-06 21:17:01,463 | INFO     | all workflow threads have been joined
[2025-10-06 23:17:14] 2025-10-06 21:17:01,463 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 23:17:14] 2025-10-06 21:17:01,463 | INFO     | traces error code: 0
[2025-10-06 23:17:14] 2025-10-06 21:17:01,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 23:17:14] 2025-10-06 21:17:13,842 | INFO     | PID=848526 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 23:17:14] 2025-10-06 21:17:13,843 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 23:17:14] 2025-10-06 21:17:13,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 23:17:14] 2025-10-06 21:17:13,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 23:17:14] 2025-10-06 21:17:13,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 23:17:14] 2025-10-06 21:17:13,843 | INFO     | [monitor] control thread has ended
[2025-10-06 23:17:14] 2025-10-06 21:17:13,922 [wrapper] ==== pilot stdout END ====
[2025-10-06 23:17:14] 2025-10-06 21:17:13,924 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 23:17:14] 2025-10-06 21:17:13,925 [wrapper] pilotpid: 848526
[2025-10-06 23:17:14] 2025-10-06 21:17:13,926 [wrapper] Pilot exit status: 0
[2025-10-06 23:17:14] 2025-10-06 21:17:13,933 [wrapper] pandaids: 6832199574
[2025-10-06 23:17:14] 2025-10-06 21:17:13,946 [wrapper] cleanup supervisor_pilot  883921 848527
[2025-10-06 23:17:14] 2025-10-06 21:17:13,948 [wrapper] Test setup, not cleaning
[2025-10-06 23:17:14] 2025-10-06 21:17:13,949 [wrapper] apfmon messages muted
[2025-10-06 23:17:14] 2025-10-06 21:17:13,950 [wrapper] ==== wrapper stdout END ====
[2025-10-06 23:17:14] 2025-10-06 21:17:13,952 [wrapper] ==== wrapper stderr END ====
[2025-10-06 23:17:14]  *** Error codes and diagnostics ***
[2025-10-06 23:17:14]     "exeErrorCode": 0,
[2025-10-06 23:17:14]     "exeErrorDiag": "",
[2025-10-06 23:17:14]     "pilotErrorCode": 0,
[2025-10-06 23:17:14]     "pilotErrorDiag": "",
[2025-10-06 23:17:14]  *** Listing of results directory ***
[2025-10-06 23:17:14] total 403952
[2025-10-06 23:17:14] -rw-r--r-- 1 root root    552446 Oct  6 02:53 pilot3.tar.gz
[2025-10-06 23:17:14] -rw-r--r-- 1 root root      5112 Oct  6 02:54 queuedata.json
[2025-10-06 23:17:14] -rwx------ 1 4871 1028     36292 Oct  6 02:55 runpilot2-wrapper.sh
[2025-10-06 23:17:14] -rw-r--r-- 1 root root       100 Oct  6 18:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 23:17:14] -rwxr-xr-x 1 root root      7986 Oct  6 18:09 run_atlas
[2025-10-06 23:17:14] -rw-r--r-- 1 root root       105 Oct  6 18:09 job.xml
[2025-10-06 23:17:14] -rw-r--r-- 2 root root     15120 Oct  6 18:09 start_atlas.sh
[2025-10-06 23:17:14] drwxrwx--x 2 root root      4096 Oct  6 18:09 shared
[2025-10-06 23:17:14] -rw-r--r-- 2 root root    565600 Oct  6 18:09 input.tar.gz
[2025-10-06 23:17:14] -rw-r--r-- 1 root root      6136 Oct  6 18:09 init_data.xml
[2025-10-06 23:17:14] -rw-r--r-- 2 root root 218407496 Oct  6 18:09 EVNT.46376901._003746.pool.root.1
[2025-10-06 23:17:14] -rw-r--r-- 1 root root         0 Oct  6 18:09 boinc_lockfile
[2025-10-06 23:17:14] -rw-r--r-- 1 root root      2519 Oct  6 18:09 pandaJob.out
[2025-10-06 23:17:14] -rw------- 1 root root    975002 Oct  6 18:09 agis_schedconf.cvmfs.json
[2025-10-06 23:17:14] drwxr-xr-x 4  320  320      4096 Oct  6 18:09 pilot3
[2025-10-06 23:17:14] -rw------- 1 root root 185449184 Oct  6 23:16 HITS.46376905._101338.pool.root.1
[2025-10-06 23:17:14] -rw------- 1 root root        95 Oct  6 23:16 pilot_heartbeat.json
[2025-10-06 23:17:14] -rw------- 1 root root      1033 Oct  6 23:16 memory_monitor_summary.json
[2025-10-06 23:17:14] -rw-r--r-- 1 root root       530 Oct  6 23:16 boinc_task_state.xml
[2025-10-06 23:17:14] -rw------- 1 root root   1560401 Oct  6 23:16 agis_ddmendpoints.agis.ALL.json
[2025-10-06 23:17:14] -rw------- 1 root root    414527 Oct  6 23:16 log.46376905._101338.job.log.tgz.1
[2025-10-06 23:17:14] -rw------- 1 root root      7782 Oct  6 23:16 heartbeat.json
[2025-10-06 23:17:14] -rw-r--r-- 1 root root      8192 Oct  6 23:17 boinc_mmap_file
[2025-10-06 23:17:14] -rw-r--r-- 1 root root        28 Oct  6 23:17 wrapper_checkpoint.txt
[2025-10-06 23:17:14] -rw------- 1 root root       746 Oct  6 23:17 pilotlog.txt
[2025-10-06 23:17:14] -rw------- 1 root root   2537184 Oct  6 23:17 log.46376905._101338.job.log.1
[2025-10-06 23:17:14] -rw------- 1 root root       357 Oct  6 23:17 output.list
[2025-10-06 23:17:14] -rw-r--r-- 1 root root       620 Oct  6 23:17 runtime_log
[2025-10-06 23:17:14] -rw------- 1 root root   2969600 Oct  6 23:17 result.tar.gz
[2025-10-06 23:17:14] -rw-r--r-- 1 root root      8767 Oct  6 23:17 runtime_log.err
[2025-10-06 23:17:14] -rw------- 1 root root       654 Oct  6 23:17 05ZLDm7goP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmK1RNDmx78mIn.diag
[2025-10-06 23:17:14] -rw-r--r-- 1 root root     20999 Oct  6 23:17 stderr.txt
[2025-10-06 23:17:14] HITS file was successfully produced:
[2025-10-06 23:17:14] -rw------- 1 root root 185449184 Oct  6 23:16 shared/HITS.pool.root.1
[2025-10-06 23:17:14]  *** Contents of shared directory: ***
[2025-10-06 23:17:14] total 397876
[2025-10-06 23:17:14] -rw-r--r-- 2 root root     15120 Oct  6 18:09 start_atlas.sh
[2025-10-06 23:17:14] -rw-r--r-- 2 root root    565600 Oct  6 18:09 input.tar.gz
[2025-10-06 23:17:14] -rw-r--r-- 2 root root 218407496 Oct  6 18:09 ATLAS.root_0
[2025-10-06 23:17:14] -rw------- 1 root root 185449184 Oct  6 23:16 HITS.pool.root.1
[2025-10-06 23:17:14] -rw------- 1 root root   2969600 Oct  6 23:17 result.tar.gz
23:17:15 (844889): run_atlas exited; CPU time 36040.277222
23:17:15 (844889): called boinc_finish(0)

</stderr_txt>
]]>

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