Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:16:58 (2237848): wrapper (7.7.26015): starting
05:16:58 (2237848): wrapper: running run_atlas (--nthreads 12)
[2025-10-06 05:16:58] Arguments: --nthreads 12
[2025-10-06 05:16:58] Threads: 12
[2025-10-06 05:16:58] Checking for CVMFS
[2025-10-06 05:16:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 05:16:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 05:16:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 05:16:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 05:16:59] 2.11.5.0 2838 22803 209912 151397 2 266 41589867 45568001 12772 130560 0 224963017 99.855 101181649 32249 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-06 05:16:59] CVMFS is ok
[2025-10-06 05:16:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 05:16:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 05:16:59] Further information can be found at the LHC@home message board.
[2025-10-06 05:16:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 05:16:59] Checking for apptainer binary...
[2025-10-06 05:16:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 05:16:59] Running /usr/bin/apptainer --version
[2025-10-06 05:16:59] apptainer version 1.4.1-1.el9
[2025-10-06 05:16:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 05:16:59] wns0073.triumf.lcg
[2025-10-06 05:16:59] apptainer works
[2025-10-06 05:16:59] Set ATHENA_PROC_NUMBER=12
[2025-10-06 05:16:59] Set ATHENA_CORE_NUMBER=12
[2025-10-06 05:16:59] Starting ATLAS job with PandaID=6832567702
[2025-10-06 05:16:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 05:20:17]  *** The last 200 lines of the pilot log: ***
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | WARNING  | found no stored workdir sizes
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | WARNING  | wrong length of table data, x=[1759753050.0], y=[825.0] (must be same and length>=4)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | ..............................
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | . Timing measurements:
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | . get job = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | . initial setup = 2 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . payload setup = 4 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . stage-in = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . payload execution = 14 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . stage-out = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . log creation = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | ..............................
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832567702/pilotlog.txt
[2025-10-06 05:20:17] 2025-10-06 12:19:45,494 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-06 05:20:17] - Log from pilotlog.txt -
[2025-10-06 05:20:17] 2025-10-06 12:19:45,482 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 05:20:17] 2025-10-06 12:19:45,482 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 05:20:17] 2025-10-06 12:19:45,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 05:20:17] 2025-10-06 12:19:45,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | WARNING  | found no stored workdir sizes
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | WARNING  | wrong length of table data, x=[1759753050.0], y=[825.0] (must be same and length>=4)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | ..............................
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | . Timing measurements:
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | . get job = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | . initial setup = 2 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . payload setup = 4 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . stage-in = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . payload execution = 14 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . stage-out = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . log creation = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | ..............................
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832567702/pilotlog.txt
[2025-10-06 05:20:17] 2025-10-06 12:19:45,494 | WARNING  | 
[2025-10-06 05:20:17] [begin log extracts]
[2025-10-06 05:20:17] - Log from pilotlog.txt -
[2025-10-06 05:20:17] 2025-10-06 12:19:45,482 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 05:20:17] 2025-10-06 12:19:45,482 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 05:20:17] 2025-10-06 12:19:45,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 05:20:17] 2025-10-06 12:19:45,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | WARNING  | found no stored workdir sizes
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | will not add max space = 0 B to job metrics
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | WARNING  | wrong length of table data, x=[1759753050.0], y=[825.0] (must be same and length>=4)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | could have reported an average CPU frequency of 2695 MHz (4 samples)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | ..............................
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | . Timing measurements:
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | . get job = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,483 | INFO     | . initial setup = 2 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . payload setup = 4 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . stage-in = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . payload execution = 14 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . stage-out = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | . log creation = 0 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | ..............................
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-06 05:20:17] 2025-10-06 12:19:45,484 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832567702/pilotlog.txt
[2025-10-06 05:20:17] [end log extracts]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,495 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,496 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | 
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | job summary report
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | --------------------------------------------------
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | PanDA job id: 6832567702
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | task id: 46376905
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-06 05:17:36,668 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | pilot state: failed 
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | transexitcode: 65
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | exeerrorcode: 65
[2025-10-06 05:20:17] 2025-10-06 12:19:45,556 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | exitcode: 65
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | cpuconsumptiontime: 16 s
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | nevents: 0
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | neventsw: 0
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | pid: 2248074
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | pgrp: 2248074
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | corecount: 12
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | event service: False
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | sizes: {0: 2348817, 3: 2349079, 11: 2349107, 22: 2372238, 23: 2376530, 24: 2376558, 143: 2376852}
[2025-10-06 05:20:17] 2025-10-06 12:19:45,557 | INFO     | --------------------------------------------------
[2025-10-06 05:20:17] 2025-10-06 12:19:45,558 | INFO     | 
[2025-10-06 05:20:17] 2025-10-06 12:19:45,558 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,572 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | job 6832567702 has completed (purged errors)
[2025-10-06 05:20:17] 2025-10-06 12:19:45,573 | INFO     | overall cleanup function is called
[2025-10-06 05:20:17] 2025-10-06 12:19:46,579 | INFO     | --- collectZombieJob: --- 10, [2248074]
[2025-10-06 05:20:17] 2025-10-06 12:19:46,579 | INFO     | zombie collector waiting for pid 2248074
[2025-10-06 05:20:17] 2025-10-06 12:19:46,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 05:20:17] 2025-10-06 12:19:46,579 | INFO     | collected zombie processes
[2025-10-06 05:20:17] 2025-10-06 12:19:46,579 | INFO     | will attempt to kill all subprocesses of pid=2248074
[2025-10-06 05:20:17] 2025-10-06 12:19:46,733 | INFO     | process IDs to be killed: [2248074] (in reverse order)
[2025-10-06 05:20:17] 2025-10-06 12:19:46,791 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 05:20:17] 2025-10-06 12:19:46,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 05:20:17] 2025-10-06 12:19:46,798 | INFO     | did not find any defunct processes belonging to 2248074
[2025-10-06 05:20:17] 2025-10-06 12:19:46,804 | INFO     | did not find any defunct processes belonging to 2248074
[2025-10-06 05:20:17] 2025-10-06 12:19:46,804 | INFO     | ready for new job
[2025-10-06 05:20:17] 2025-10-06 12:19:46,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 05:20:17] 2025-10-06 12:19:46,806 | INFO     | ***************************************
[2025-10-06 05:20:17] 2025-10-06 12:19:46,806 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 05:20:17] 2025-10-06 12:19:46,806 | INFO     | ***************************************
[2025-10-06 05:20:17] 2025-10-06 12:19:46,806 | INFO     | 
[2025-10-06 05:20:17] 2025-10-06 12:19:46,808 | INFO     | architecture information:
[2025-10-06 05:20:17] 2025-10-06 12:19:46,809 | INFO     | executing command: cat /etc/os-release
[2025-10-06 05:20:17] 2025-10-06 12:19:46,818 | INFO     | cat /etc/os-release:
[2025-10-06 05:20:17] NAME="CentOS Linux"
[2025-10-06 05:20:17] VERSION="7 (Core)"
[2025-10-06 05:20:17] ID="centos"
[2025-10-06 05:20:17] ID_LIKE="rhel fedora"
[2025-10-06 05:20:17] VERSION_ID="7"
[2025-10-06 05:20:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 05:20:17] ANSI_COLOR="0;31"
[2025-10-06 05:20:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 05:20:17] HOME_URL="https://www.centos.org/"
[2025-10-06 05:20:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 05:20:17] 
[2025-10-06 05:20:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 05:20:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 05:20:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 05:20:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 05:20:17] 
[2025-10-06 05:20:17] 2025-10-06 12:19:46,818 | INFO     | ***************************************
[2025-10-06 05:20:17] 2025-10-06 12:19:47,321 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-06 05:20:17] 2025-10-06 12:19:47,332 | INFO     | sufficient remaining disk space (1291319246848 B)
[2025-10-06 05:20:17] 2025-10-06 12:19:47,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 05:20:17] 2025-10-06 12:19:47,333 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 05:20:17] 2025-10-06 12:19:47,333 | INFO     | update_server=False
[2025-10-06 05:20:17] 2025-10-06 12:19:47,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 05:20:17] 2025-10-06 12:19:47,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 05:20:17] 2025-10-06 12:19:47,583 | INFO     | all job control threads have been joined
[2025-10-06 05:20:17] 2025-10-06 12:19:47,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 05:20:17] 2025-10-06 12:19:47,738 | INFO     | aborting loop
[2025-10-06 05:20:17] 2025-10-06 12:19:47,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 05:20:17] 2025-10-06 12:19:48,248 | INFO     | all payload control threads have been joined
[2025-10-06 05:20:17] 2025-10-06 12:19:48,338 | INFO     | [job] retrieve thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:48,338 | INFO     | [job] queue monitor thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:48,376 | INFO     | all data control threads have been joined
[2025-10-06 05:20:17] 2025-10-06 12:19:48,386 | INFO     | [payload] validate_post thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:48,587 | INFO     | [job] control thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:48,672 | INFO     | [data] copytool_in thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:48,743 | INFO     | [job] job monitor thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:48,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 05:20:17] 2025-10-06 12:19:48,933 | INFO     | [payload] failed_post thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:49,253 | INFO     | [payload] control thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:49,381 | INFO     | [data] control thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:49,520 | INFO     | [job] validate thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:49,643 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:49,656 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:49,789 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:49,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:49,867 | INFO     | [data] copytool_out thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:19:52,749 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 05:20:17] 2025-10-06 12:20:07,351 | INFO     | [monitor] cgroup control has ended
[2025-10-06 05:20:17] 2025-10-06 12:20:09,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666355791680)>', '<ExcThread(monitor, started 140665539258112)>']
[2025-10-06 05:20:17] 2025-10-06 12:20:14,039 | INFO     | all workflow threads have been joined
[2025-10-06 05:20:17] 2025-10-06 12:20:14,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 05:20:17] 2025-10-06 12:20:14,039 | INFO     | traces error code: 0
[2025-10-06 05:20:17] 2025-10-06 12:20:14,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 05:20:17] 2025-10-06 12:20:17,137 | INFO     | PID=2241507 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-06 05:20:17] 2025-10-06 12:20:17,137 | INFO     | .. there are 21 such processes running
[2025-10-06 05:20:17] 2025-10-06 12:20:17,138 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 05:20:17] 2025-10-06 12:20:17,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 05:20:17] 2025-10-06 12:20:17,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 05:20:17] 2025-10-06 12:20:17,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 05:20:17] 2025-10-06 12:20:17,138 | CRITICAL | thread 'MainThread' is not alive
[2025-10-06 05:20:17] 2025-10-06 12:20:17,138 | INFO     | [monitor] control thread has ended
[2025-10-06 05:20:17] 2025-10-06 12:20:17,286 [wrapper] ==== pilot stdout END ====
[2025-10-06 05:20:17] 2025-10-06 12:20:17,288 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 05:20:17] 2025-10-06 12:20:17,290 [wrapper] pilotpid: 2241507
[2025-10-06 05:20:17] 2025-10-06 12:20:17,292 [wrapper] Pilot exit status: 0
[2025-10-06 05:20:17] 2025-10-06 12:20:17,301 [wrapper] pandaids: 6832567702
[2025-10-06 05:20:17] 2025-10-06 12:20:17,340 [wrapper] cleanup supervisor_pilot 2241513 2241508
[2025-10-06 05:20:17] 2025-10-06 12:20:17,343 [wrapper] Test setup, not cleaning
[2025-10-06 05:20:17] 2025-10-06 12:20:17,345 [wrapper] apfmon messages muted
[2025-10-06 05:20:17] 2025-10-06 12:20:17,347 [wrapper] ==== wrapper stdout END ====
[2025-10-06 05:20:17] 2025-10-06 12:20:17,350 [wrapper] ==== wrapper stderr END ====
[2025-10-06 05:20:17]  *** Error codes and diagnostics ***
[2025-10-06 05:20:17]     "exeErrorCode": 65,
[2025-10-06 05:20:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 05:20:17]     "pilotErrorCode": 1305,
[2025-10-06 05:20:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-06 05:20:17]  *** Listing of results directory ***
[2025-10-06 05:20:17] total 213416
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc    552446 Oct  6 02:41 pilot3.tar.gz
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc      5112 Oct  6 02:49 queuedata.json
[2025-10-06 05:20:17] -rwx------. 1 boinc boinc     36292 Oct  6 02:50 runpilot2-wrapper.sh
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc       100 Oct  6 05:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 05:20:17] -rwxr-xr-x. 1 boinc boinc      7986 Oct  6 05:16 run_atlas
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc       105 Oct  6 05:16 job.xml
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc      6593 Oct  6 05:16 init_data.xml
[2025-10-06 05:20:17] -rw-r--r--. 2 boinc boinc 214448329 Oct  6 05:16 EVNT.46376901._004048.pool.root.1
[2025-10-06 05:20:17] -rw-r--r--. 2 boinc boinc     15120 Oct  6 05:16 start_atlas.sh
[2025-10-06 05:20:17] drwxrwx--x. 2 boinc boinc      4096 Oct  6 05:16 shared
[2025-10-06 05:20:17] -rw-r--r--. 2 boinc boinc    565606 Oct  6 05:16 input.tar.gz
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc         0 Oct  6 05:16 boinc_lockfile
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc      2521 Oct  6 05:16 pandaJob.out
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc    975011 Oct  6 05:17 agis_schedconf.cvmfs.json
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc   1560401 Oct  6 05:17 agis_ddmendpoints.agis.ALL.json
[2025-10-06 05:20:17] drwx------. 4 boinc boinc      4096 Oct  6 05:17 pilot3
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc       951 Oct  6 05:17 memory_monitor_summary.json
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc       522 Oct  6 05:17 boinc_task_state.xml
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc     20970 Oct  6 05:17 log.46376905._109207.job.log.tgz.1
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc      8393 Oct  6 05:19 heartbeat.json
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc      8192 Oct  6 05:20 boinc_mmap_file
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc        22 Oct  6 05:20 wrapper_checkpoint.txt
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc       893 Oct  6 05:20 pilotlog.txt
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc        95 Oct  6 05:20 pilot_heartbeat.json
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc     82082 Oct  6 05:20 log.46376905._109207.job.log.1
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc       188 Oct  6 05:20 output.list
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc       620 Oct  6 05:20 runtime_log
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc    122880 Oct  6 05:20 result.tar.gz
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc       645 Oct  6 05:20 TCYMDma2wP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjwIMDmmahJDo.diag
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc      8528 Oct  6 05:20 runtime_log.err
[2025-10-06 05:20:17] -rw-r--r--. 1 boinc boinc     21622 Oct  6 05:20 stderr.txt
[2025-10-06 05:20:17] No HITS result produced
[2025-10-06 05:20:17]  *** Contents of shared directory: ***
[2025-10-06 05:20:17] total 210116
[2025-10-06 05:20:17] -rw-r--r--. 2 boinc boinc 214448329 Oct  6 05:16 ATLAS.root_0
[2025-10-06 05:20:17] -rw-r--r--. 2 boinc boinc     15120 Oct  6 05:16 start_atlas.sh
[2025-10-06 05:20:17] -rw-r--r--. 2 boinc boinc    565606 Oct  6 05:16 input.tar.gz
[2025-10-06 05:20:17] -rw-------. 1 boinc boinc    122880 Oct  6 05:20 result.tar.gz
05:20:18 (2237848): run_atlas exited; CPU time 20.256681
05:20:18 (2237848): called boinc_finish(0)

</stderr_txt>
]]>

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