Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:40:31 (11046): wrapper (7.7.26015): starting
09:40:31 (11046): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 09:40:31] Arguments: --nthreads 8
[2025-10-07 09:40:31] Threads: 8
[2025-10-07 09:40:31] Checking for CVMFS
[2025-10-07 09:40:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 09:40:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 09:40:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 09:40:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 09:40:33] 2.11.2.0 11231 213039 138940 151429 1 61 23491722 25165825 4632 130560 0 113739105 99.883 62029797 4216 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 09:40:33] CVMFS is ok
[2025-10-07 09:40:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 09:40:33] Checking for apptainer binary...
[2025-10-07 09:40:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 09:40:33] Running /usr/bin/apptainer --version
[2025-10-07 09:40:33] apptainer version 1.3.2-1.el7
[2025-10-07 09:40:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 09:40:53] cg-vwn244.simple-grid.lan
[2025-10-07 09:40:53] apptainer works
[2025-10-07 09:40:53] Set ATHENA_PROC_NUMBER=8
[2025-10-07 09:40:53] Set ATHENA_CORE_NUMBER=8
[2025-10-07 09:40:53] Starting ATLAS job with PandaID=6832422642
[2025-10-07 09:40:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 13:36:55]  *** The last 200 lines of the pilot log: ***
[2025-10-07 13:36:55] 2025-10-07 11:36:19,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 13:36:55] 2025-10-07 11:36:19,586 | INFO     | fitting pss+swap vs Time
[2025-10-07 13:36:55] 2025-10-07 11:36:19,586 | INFO     | sum of square deviations: 3301699115.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,588 | INFO     | sum of deviations: 94160187125.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,588 | INFO     | mean x: 1759830161.5
[2025-10-07 13:36:55] 2025-10-07 11:36:19,589 | INFO     | mean y: 2405982.590909091
[2025-10-07 13:36:55] 2025-10-07 11:36:19,589 | INFO     | -- intersect: -50185673410.30039
[2025-10-07 13:36:55] 2025-10-07 11:36:19,589 | INFO     | intersect: -50185673410.30039
[2025-10-07 13:36:55] 2025-10-07 11:36:19,589 | INFO     | chi2: 7.021802579532709
[2025-10-07 13:36:55] 2025-10-07 11:36:19,590 | INFO     | sum of square deviations: 3081657780.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,591 | INFO     | sum of deviations: 106514524750.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,592 | INFO     | mean x: 1759830009.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,592 | INFO     | mean y: 2414353.7023255816
[2025-10-07 13:36:55] 2025-10-07 11:36:19,592 | INFO     | -- intersect: -60824410177.54826
[2025-10-07 13:36:55] 2025-10-07 11:36:19,592 | INFO     | intersect: -60824410177.54826
[2025-10-07 13:36:55] 2025-10-07 11:36:19,593 | INFO     | chi2: 6.267352540174854
[2025-10-07 13:36:55] 2025-10-07 11:36:19,593 | INFO     | current chi2=6.267352540174854 (change=10.744392637254444 %)
[2025-10-07 13:36:55] 2025-10-07 11:36:19,593 | INFO     | right removable region: 214
[2025-10-07 13:36:55] 2025-10-07 11:36:19,593 | INFO     | sum of square deviations: 3081657780.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,595 | INFO     | sum of deviations: 20139158051.999985
[2025-10-07 13:36:55] 2025-10-07 11:36:19,595 | INFO     | mean x: 1759830314.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,596 | INFO     | mean y: 2457236.339534884
[2025-10-07 13:36:55] 2025-10-07 11:36:19,596 | INFO     | -- intersect: -11498333366.810034
[2025-10-07 13:36:55] 2025-10-07 11:36:19,596 | INFO     | intersect: -11498333366.810034
[2025-10-07 13:36:55] 2025-10-07 11:36:19,596 | INFO     | chi2: 2.325956909382483
[2025-10-07 13:36:55] 2025-10-07 11:36:19,596 | INFO     | current chi2=2.325956909382483 (change=66.87521639867478 %)
[2025-10-07 13:36:55] 2025-10-07 11:36:19,597 | INFO     | sum of square deviations: 2871616632.5
[2025-10-07 13:36:55] 2025-10-07 11:36:19,599 | INFO     | sum of deviations: -17067277108.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,599 | INFO     | mean x: 1759830466.5
[2025-10-07 13:36:55] 2025-10-07 11:36:19,599 | INFO     | mean y: 2484071.5142857144
[2025-10-07 13:36:55] 2025-10-07 11:36:19,600 | INFO     | -- intersect: 10461928377.179768
[2025-10-07 13:36:55] 2025-10-07 11:36:19,600 | INFO     | intersect: 10461928377.179768
[2025-10-07 13:36:55] 2025-10-07 11:36:19,600 | INFO     | chi2: 0.9312583639378492
[2025-10-07 13:36:55] 2025-10-07 11:36:19,600 | INFO     | current chi2=0.9312583639378492 (change=59.96235527058459 %)
[2025-10-07 13:36:55] 2025-10-07 11:36:19,601 | INFO     | sum of square deviations: 2671343110.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,602 | INFO     | sum of deviations: -20517334689.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,602 | INFO     | mean x: 1759830619.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,603 | INFO     | mean y: 2486680.068292683
[2025-10-07 13:36:55] 2025-10-07 11:36:19,603 | INFO     | -- intersect: 13518921042.546366
[2025-10-07 13:36:55] 2025-10-07 11:36:19,603 | INFO     | intersect: 13518921042.546366
[2025-10-07 13:36:55] 2025-10-07 11:36:19,603 | INFO     | chi2: 0.9124128645279898
[2025-10-07 13:36:55] 2025-10-07 11:36:19,603 | INFO     | current chi2=0.9124128645279898 (change=2.0236596136619704 %)
[2025-10-07 13:36:55] 2025-10-07 11:36:19,603 | INFO     | left removable region: 30
[2025-10-07 13:36:55] 2025-10-07 11:36:19,604 | INFO     | sum of square deviations: 1931608310.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,605 | INFO     | sum of deviations: 3632883243.0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,605 | INFO     | mean x: 1759830893.5
[2025-10-07 13:36:55] 2025-10-07 11:36:19,605 | INFO     | mean y: 2489015.532608696
[2025-10-07 13:36:55] 2025-10-07 11:36:19,606 | INFO     | -- intersect: -3307322880.808771
[2025-10-07 13:36:55] 2025-10-07 11:36:19,606 | INFO     | intersect: -3307322880.808771
[2025-10-07 13:36:55] 2025-10-07 11:36:19,606 | INFO     | chi2: 0.0006767423104612086
[2025-10-07 13:36:55] 2025-10-07 11:36:19,606 | INFO     | -- intersect: -3307322880.808771
[2025-10-07 13:36:55] 2025-10-07 11:36:19,606 | INFO     | current memory leak: 1.88 B/s (using 184 data points, chi2=0.00)
[2025-10-07 13:36:55] 2025-10-07 11:36:19,607 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-07 13:36:55] 2025-10-07 11:36:19,607 | INFO     | ..............................
[2025-10-07 13:36:55] 2025-10-07 11:36:19,607 | INFO     | . Timing measurements:
[2025-10-07 13:36:55] 2025-10-07 11:36:19,607 | INFO     | . get job = 0 s
[2025-10-07 13:36:55] 2025-10-07 11:36:19,608 | INFO     | . initial setup = 7 s
[2025-10-07 13:36:55] 2025-10-07 11:36:19,608 | INFO     | . payload setup = 118 s
[2025-10-07 13:36:55] 2025-10-07 11:36:19,608 | INFO     | . stage-in = 0 s
[2025-10-07 13:36:55] 2025-10-07 11:36:19,608 | INFO     | . payload execution = 13560 s
[2025-10-07 13:36:55] 2025-10-07 11:36:19,608 | INFO     | . stage-out = 2 s
[2025-10-07 13:36:55] 2025-10-07 11:36:19,608 | INFO     | . log creation = 0 s
[2025-10-07 13:36:55] 2025-10-07 11:36:19,608 | INFO     | ..............................
[2025-10-07 13:36:55] 2025-10-07 11:36:19,732 | INFO     | 
[2025-10-07 13:36:55] 2025-10-07 11:36:19,732 | INFO     | job summary report
[2025-10-07 13:36:55] 2025-10-07 11:36:19,732 | INFO     | --------------------------------------------------
[2025-10-07 13:36:55] 2025-10-07 11:36:19,733 | INFO     | PanDA job id: 6832422642
[2025-10-07 13:36:55] 2025-10-07 11:36:19,733 | INFO     | task id: 46376905
[2025-10-07 13:36:55] 2025-10-07 11:36:19,733 | INFO     | errors: (none)
[2025-10-07 13:36:55] 2025-10-07 11:36:19,733 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 13:36:55] 2025-10-07 11:36:19,733 | INFO     | pilot state: finished 
[2025-10-07 13:36:55] 2025-10-07 11:36:19,733 | INFO     | transexitcode: 0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,733 | INFO     | exeerrorcode: 0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,733 | INFO     | exeerrordiag: 
[2025-10-07 13:36:55] 2025-10-07 11:36:19,733 | INFO     | exitcode: 0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,733 | INFO     | exitmsg: OK
[2025-10-07 13:36:55] 2025-10-07 11:36:19,734 | INFO     | cpuconsumptiontime: 48126 s
[2025-10-07 13:36:55] 2025-10-07 11:36:19,734 | INFO     | nevents: 400
[2025-10-07 13:36:55] 2025-10-07 11:36:19,734 | INFO     | neventsw: 0
[2025-10-07 13:36:55] 2025-10-07 11:36:19,734 | INFO     | pid: 21405
[2025-10-07 13:36:55] 2025-10-07 11:36:19,734 | INFO     | pgrp: 21405
[2025-10-07 13:36:55] 2025-10-07 11:36:19,734 | INFO     | corecount: 8
[2025-10-07 13:36:55] 2025-10-07 11:36:19,734 | INFO     | event service: False
[2025-10-07 13:36:55] 2025-10-07 11:36:19,734 | INFO     | sizes: {0: 2347982, 1: 2348668, 2: 2348867, 13: 2348867, 23: 2348923, 34: 2348951, 45: 2349107, 56: 2349135, 66: 2349163, 77: 2349191, 82: 2349509, 88: 2349845, 13
[2025-10-07 13:36:55] 2025-10-07 11:36:19,735 | INFO     | --------------------------------------------------
[2025-10-07 13:36:55] 2025-10-07 11:36:19,735 | INFO     | 
[2025-10-07 13:36:55] 2025-10-07 11:36:19,735 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-07 13:36:55] 2025-10-07 11:36:19,750 | INFO     | time since job start (13929s) is within the limit (172800.0s)
[2025-10-07 13:36:55] 2025-10-07 11:36:20,043 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,043 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,043 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,043 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,043 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,043 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,043 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,048 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 13:36:55] 2025-10-07 11:36:20,048 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,048 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 13:36:55] 2025-10-07 11:36:20,048 | INFO     | job 6832422642 has completed (purged errors)
[2025-10-07 13:36:55] 2025-10-07 11:36:20,048 | INFO     | overall cleanup function is called
[2025-10-07 13:36:55] 2025-10-07 11:36:21,056 | INFO     | --- collectZombieJob: --- 10, [21405]
[2025-10-07 13:36:55] 2025-10-07 11:36:21,056 | INFO     | zombie collector waiting for pid 21405
[2025-10-07 13:36:55] 2025-10-07 11:36:21,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 13:36:55] 2025-10-07 11:36:21,057 | INFO     | collected zombie processes
[2025-10-07 13:36:55] 2025-10-07 11:36:21,057 | INFO     | will attempt to kill all subprocesses of pid=21405
[2025-10-07 13:36:55] 2025-10-07 11:36:21,201 | INFO     | process IDs to be killed: [21405] (in reverse order)
[2025-10-07 13:36:55] 2025-10-07 11:36:21,800 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 13:36:55] 2025-10-07 11:36:21,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 13:36:55] 2025-10-07 11:36:21,804 | INFO     | did not find any defunct processes belonging to 21405
[2025-10-07 13:36:55] 2025-10-07 11:36:21,811 | INFO     | did not find any defunct processes belonging to 21405
[2025-10-07 13:36:55] 2025-10-07 11:36:21,812 | INFO     | ready for new job
[2025-10-07 13:36:55] 2025-10-07 11:36:21,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 13:36:55] 2025-10-07 11:36:21,814 | INFO     | ***************************************
[2025-10-07 13:36:55] 2025-10-07 11:36:21,814 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 13:36:55] 2025-10-07 11:36:21,814 | INFO     | ***************************************
[2025-10-07 13:36:55] 2025-10-07 11:36:21,814 | INFO     | 
[2025-10-07 13:36:55] 2025-10-07 11:36:21,815 | INFO     | pilot is running in a VM
[2025-10-07 13:36:55] 2025-10-07 11:36:21,815 | INFO     | architecture information:
[2025-10-07 13:36:55] 2025-10-07 11:36:21,821 | INFO     | executing command: cat /etc/os-release
[2025-10-07 13:36:55] 2025-10-07 11:36:22,029 | INFO     | cat /etc/os-release:
[2025-10-07 13:36:55] NAME="CentOS Linux"
[2025-10-07 13:36:55] VERSION="7 (Core)"
[2025-10-07 13:36:55] ID="centos"
[2025-10-07 13:36:55] ID_LIKE="rhel fedora"
[2025-10-07 13:36:55] VERSION_ID="7"
[2025-10-07 13:36:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 13:36:55] ANSI_COLOR="0;31"
[2025-10-07 13:36:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 13:36:55] HOME_URL="https://www.centos.org/"
[2025-10-07 13:36:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 13:36:55] 
[2025-10-07 13:36:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 13:36:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 13:36:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 13:36:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 13:36:55] 
[2025-10-07 13:36:55] 2025-10-07 11:36:22,029 | INFO     | ***************************************
[2025-10-07 13:36:55] 2025-10-07 11:36:22,532 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-07 13:36:55] 2025-10-07 11:36:22,718 | INFO     | sufficient remaining disk space (496371761152 B)
[2025-10-07 13:36:55] 2025-10-07 11:36:22,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 13:36:55] 2025-10-07 11:36:22,719 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 13:36:55] 2025-10-07 11:36:22,719 | INFO     | update_server=False
[2025-10-07 13:36:55] 2025-10-07 11:36:22,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 13:36:55] 2025-10-07 11:36:22,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 13:36:55] 2025-10-07 11:36:22,721 | INFO     | aborting loop
[2025-10-07 13:36:55] 2025-10-07 11:36:23,616 | INFO     | all data control threads have been joined
[2025-10-07 13:36:55] 2025-10-07 11:36:23,726 | INFO     | [job] job monitor thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:23,729 | INFO     | [job] retrieve thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:23,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 13:36:55] 2025-10-07 11:36:23,948 | INFO     | all payload control threads have been joined
[2025-10-07 13:36:55] 2025-10-07 11:36:23,971 | INFO     | [data] copytool_in thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:24,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 13:36:55] 2025-10-07 11:36:24,168 | INFO     | [payload] validate_post thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:24,245 | INFO     | all job control threads have been joined
[2025-10-07 13:36:55] 2025-10-07 11:36:24,264 | INFO     | [payload] failed_post thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:24,357 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:24,358 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:24,622 | INFO     | [data] control thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:24,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 13:36:55] 2025-10-07 11:36:24,941 | INFO     | [job] validate thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:24,954 | INFO     | [payload] control thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:25,059 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:25,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:25,250 | INFO     | [job] control thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:25,751 | INFO     | [job] queue monitor thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:25,952 | INFO     | [data] copytool_out thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:28,026 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 13:36:55] 2025-10-07 11:36:33,838 | INFO     | [monitor] cgroup control has ended
[2025-10-07 13:36:55] 2025-10-07 11:36:34,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651089323840)>', '<ExcThread(monitor, started 139650517690112)>']
[2025-10-07 13:36:55] 2025-10-07 11:36:39,279 | INFO     | all workflow threads have been joined
[2025-10-07 13:36:55] 2025-10-07 11:36:39,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 13:36:55] 2025-10-07 11:36:39,280 | INFO     | traces error code: 0
[2025-10-07 13:36:55] 2025-10-07 11:36:39,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 13:36:55] 2025-10-07 11:36:52,974 | INFO     | PID=14834 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 13:36:55] 2025-10-07 11:36:52,974 | INFO     | .. there are 9 such processes running
[2025-10-07 13:36:55] 2025-10-07 11:36:52,976 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 13:36:55] 2025-10-07 11:36:52,976 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 13:36:55] 2025-10-07 11:36:52,976 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 13:36:55] 2025-10-07 11:36:52,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 13:36:55] 2025-10-07 11:36:52,976 | INFO     | [monitor] control thread has ended
[2025-10-07 13:36:55] 2025-10-07 11:36:53,389 [wrapper] ==== pilot stdout END ====
[2025-10-07 13:36:55] 2025-10-07 11:36:53,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 13:36:55] 2025-10-07 11:36:53,515 [wrapper] pilotpid: 14834
[2025-10-07 13:36:55] 2025-10-07 11:36:53,561 [wrapper] Pilot exit status: 0
[2025-10-07 13:36:55] 2025-10-07 11:36:53,772 [wrapper] pandaids: 6832422642
[2025-10-07 13:36:55] 2025-10-07 11:36:54,137 [wrapper] cleanup supervisor_pilot 13198 14835
[2025-10-07 13:36:55] 2025-10-07 11:36:54,170 [wrapper] Test setup, not cleaning
[2025-10-07 13:36:55] 2025-10-07 11:36:54,246 [wrapper] apfmon messages muted
[2025-10-07 13:36:55] 2025-10-07 11:36:54,286 [wrapper] ==== wrapper stdout END ====
[2025-10-07 13:36:55] 2025-10-07 11:36:54,364 [wrapper] ==== wrapper stderr END ====
[2025-10-07 13:36:55]  *** Error codes and diagnostics ***
[2025-10-07 13:36:55]     "exeErrorCode": 0,
[2025-10-07 13:36:55]     "exeErrorDiag": "",
[2025-10-07 13:36:55]     "pilotErrorCode": 0,
[2025-10-07 13:36:55]     "pilotErrorDiag": "",
[2025-10-07 13:36:55]  *** Listing of results directory ***
[2025-10-07 13:36:55] total 388900
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc    552446 Oct  6 08:22 pilot3.tar.gz
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc      5112 Oct  6 08:29 queuedata.json
[2025-10-07 13:36:55] -rwx------. 1 boinc boinc     36292 Oct  6 08:29 runpilot2-wrapper.sh
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc       100 Oct  7 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 13:36:55] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 09:40 run_atlas
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc       105 Oct  7 09:40 job.xml
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc      6390 Oct  7 09:40 init_data.xml
[2025-10-07 13:36:55] -rw-r--r--. 2 boinc boinc 212777009 Oct  7 09:40 EVNT.46376901._003958.pool.root.1
[2025-10-07 13:36:55] -rw-r--r--. 2 boinc boinc     15120 Oct  7 09:40 start_atlas.sh
[2025-10-07 13:36:55] drwxrwx--x. 2 boinc boinc        68 Oct  7 09:40 shared
[2025-10-07 13:36:55] -rw-r--r--. 2 boinc boinc    565600 Oct  7 09:40 input.tar.gz
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc         0 Oct  7 09:40 boinc_lockfile
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc      2516 Oct  7 09:40 pandaJob.out
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc    974976 Oct  7 09:44 agis_schedconf.cvmfs.json
[2025-10-07 13:36:55] drwx------. 4 boinc boinc      4096 Oct  7 09:44 pilot3
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc 177001947 Oct  7 13:33 HITS.46376905._106823.pool.root.1
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc       531 Oct  7 13:34 boinc_task_state.xml
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc      1013 Oct  7 13:34 memory_monitor_summary.json
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc   1560401 Oct  7 13:34 agis_ddmendpoints.agis.ALL.json
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc    433279 Oct  7 13:34 log.46376905._106823.job.log.tgz.1
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc      7775 Oct  7 13:36 heartbeat.json
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc        28 Oct  7 13:36 wrapper_checkpoint.txt
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc      8192 Oct  7 13:36 boinc_mmap_file
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc        95 Oct  7 13:36 pilot_heartbeat.json
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc       820 Oct  7 13:36 pilotlog.txt
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc   1858274 Oct  7 13:36 log.46376905._106823.job.log.1
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc       357 Oct  7 13:36 output.list
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc       620 Oct  7 13:36 runtime_log
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc   2314240 Oct  7 13:36 result.tar.gz
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc      8717 Oct  7 13:36 runtime_log.err
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc       656 Oct  7 13:36 oOPMDm5ttP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxnSNDmAud57n.diag
[2025-10-07 13:36:55] -rw-r--r--. 1 boinc boinc     20624 Oct  7 13:36 stderr.txt
[2025-10-07 13:36:55] HITS file was successfully produced:
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc 177001947 Oct  7 13:33 shared/HITS.pool.root.1
[2025-10-07 13:36:55]  *** Contents of shared directory: ***
[2025-10-07 13:36:55] total 383480
[2025-10-07 13:36:55] -rw-r--r--. 2 boinc boinc 212777009 Oct  7 09:40 ATLAS.root_0
[2025-10-07 13:36:55] -rw-r--r--. 2 boinc boinc     15120 Oct  7 09:40 start_atlas.sh
[2025-10-07 13:36:55] -rw-r--r--. 2 boinc boinc    565600 Oct  7 09:40 input.tar.gz
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc 177001947 Oct  7 13:33 HITS.pool.root.1
[2025-10-07 13:36:55] -rw-------. 1 boinc boinc   2314240 Oct  7 13:36 result.tar.gz
13:36:57 (11046): run_atlas exited; CPU time 48323.653955
13:36:57 (11046): called boinc_finish(0)

</stderr_txt>
]]>

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