Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:13:39 (941190): wrapper (7.7.26015): starting
16:13:39 (941190): wrapper: running run_atlas (--nthreads 4)
[2025-10-06 16:13:39] Arguments: --nthreads 4
[2025-10-06 16:13:39] Threads: 4
[2025-10-06 16:13:39] Checking for CVMFS
[2025-10-06 16:13:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 16:13:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 16:13:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 16:13:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 16:13:39] 2.9.2.0 862535 141 59352 151400 2 56 30012349 36864000 0 130560 0 175582 99.988 6768 1113 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-06 16:13:39] CVMFS is ok
[2025-10-06 16:13:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 16:13:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-06 16:13:39] Further information can be found at the LHC@home message board.
[2025-10-06 16:13:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 16:13:39] Checking for apptainer binary...
[2025-10-06 16:13:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-06 16:13:39] Running /usr/bin/apptainer --version
[2025-10-06 16:13:39] apptainer version 1.4.1-1.1
[2025-10-06 16:13:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 16:13:39] thA338
[2025-10-06 16:13:39] apptainer works
[2025-10-06 16:13:39] Set ATHENA_PROC_NUMBER=4
[2025-10-06 16:13:39] Set ATHENA_CORE_NUMBER=4
[2025-10-06 16:13:39] Starting ATLAS job with PandaID=6831457359
[2025-10-06 16:13:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 17:21:59]  *** The last 200 lines of the pilot log: ***
[2025-10-06 17:21:59] 2025-10-06 15:21:00,801 | INFO     | 
[2025-10-06 17:21:59] 2025-10-06 15:21:00,802 | INFO     | architecture information:
[2025-10-06 17:21:59] 2025-10-06 15:21:00,802 | INFO     | executing command: cat /etc/os-release
[2025-10-06 17:21:59] 2025-10-06 15:21:00,817 | INFO     | cat /etc/os-release:
[2025-10-06 17:21:59] NAME="CentOS Linux"
[2025-10-06 17:21:59] VERSION="7 (Core)"
[2025-10-06 17:21:59] ID="centos"
[2025-10-06 17:21:59] ID_LIKE="rhel fedora"
[2025-10-06 17:21:59] VERSION_ID="7"
[2025-10-06 17:21:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 17:21:59] ANSI_COLOR="0;31"
[2025-10-06 17:21:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 17:21:59] HOME_URL="https://www.centos.org/"
[2025-10-06 17:21:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 17:21:59] 
[2025-10-06 17:21:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 17:21:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 17:21:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 17:21:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 17:21:59] 
[2025-10-06 17:21:59] 2025-10-06 15:21:00,817 | INFO     | ***************************************
[2025-10-06 17:21:59] 2025-10-06 15:21:01,320 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-06 17:21:59] 2025-10-06 15:21:01,338 | INFO     | sufficient remaining disk space (230616465408 B)
[2025-10-06 17:21:59] 2025-10-06 15:21:01,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 17:21:59] 2025-10-06 15:21:01,339 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 17:21:59] 2025-10-06 15:21:01,339 | INFO     | update_server=False
[2025-10-06 17:21:59] 2025-10-06 15:21:01,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 17:21:59] 2025-10-06 15:21:01,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 17:21:59] 2025-10-06 15:21:01,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 17:21:59] 2025-10-06 15:21:01,339 | INFO     | aborting loop
[2025-10-06 17:21:59] 2025-10-06 15:21:01,773 | INFO     | all data control threads have been joined
[2025-10-06 17:21:59] 2025-10-06 15:21:01,908 | INFO     | all job control threads have been joined
[2025-10-06 17:21:59] 2025-10-06 15:21:01,942 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 17:21:59] 2025-10-06 15:21:01,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 17:21:59] 2025-10-06 15:21:02,344 | INFO     | [job] queue monitor thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:02,345 | INFO     | [job] retrieve thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:02,345 | INFO     | [job] job monitor thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:02,430 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:02,443 | INFO     | all payload control threads have been joined
[2025-10-06 17:21:59] 2025-10-06 15:21:02,596 | INFO     | [payload] validate_post thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:02,779 | INFO     | [data] control thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:02,913 | INFO     | [job] control thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:03,135 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:03,194 | INFO     | [data] copytool_in thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:03,449 | INFO     | [payload] control thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:03,652 | INFO     | [payload] failed_post thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:03,692 | INFO     | [job] validate thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:03,692 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:03,998 | INFO     | [data] copytool_out thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:05,946 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:11,510 | INFO     | job.realtimelogging is not enabled
[2025-10-06 17:21:59] 2025-10-06 15:21:12,516 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 17:21:59] 2025-10-06 15:21:31,877 | INFO     | PID=944999 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 17:21:59] 2025-10-06 15:21:31,878 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 17:21:59] 2025-10-06 15:21:31,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 17:21:59] 2025-10-06 15:21:31,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 17:21:59] 2025-10-06 15:21:52,351 | INFO     | [monitor] cgroup control has ended
[2025-10-06 17:21:59] 2025-10-06 15:21:54,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825729771328)>', '<ExcThread(monitor, started 139824774231808)>']
[2025-10-06 17:21:59] 2025-10-06 15:21:54,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 17:21:59] 2025-10-06 15:21:54,997 | INFO     | [monitor] control thread has ended
[2025-10-06 17:21:59] 2025-10-06 15:21:59,297 | INFO     | all workflow threads have been joined
[2025-10-06 17:21:59] 2025-10-06 15:21:59,297 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 17:21:59] 2025-10-06 15:21:59,298 | INFO     | traces error code: 0
[2025-10-06 17:21:59] 2025-10-06 15:21:59,298 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 17:21:59] 2025-10-06 15:21:59,381 [wrapper] ==== pilot stdout END ====
[2025-10-06 17:21:59] 2025-10-06 15:21:59,385 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 17:21:59] 2025-10-06 15:21:59,389 [wrapper] pilotpid: 944999
[2025-10-06 17:21:59] 2025-10-06 15:21:59,393 [wrapper] Pilot exit status: 0
[2025-10-06 17:21:59] 2025-10-06 15:21:59,405 [wrapper] pandaids: 6831457359
[2025-10-06 17:21:59] 2025-10-06 15:21:59,430 [wrapper] cleanup supervisor_pilot  966200 945000
[2025-10-06 17:21:59] 2025-10-06 15:21:59,434 [wrapper] Test setup, not cleaning
[2025-10-06 17:21:59] 2025-10-06 15:21:59,438 [wrapper] apfmon messages muted
[2025-10-06 17:21:59] 2025-10-06 15:21:59,442 [wrapper] ==== wrapper stdout END ====
[2025-10-06 17:21:59] 2025-10-06 15:21:59,446 [wrapper] ==== wrapper stderr END ====
[2025-10-06 17:21:59]  *** Error codes and diagnostics ***
[2025-10-06 17:21:59]     "exeErrorCode": 0,
[2025-10-06 17:21:59]     "exeErrorDiag": "",
[2025-10-06 17:21:59]     "pilotErrorCode": 0,
[2025-10-06 17:21:59]     "pilotErrorDiag": "",
[2025-10-06 17:21:59]  *** Listing of results directory ***
[2025-10-06 17:21:59] total 398184
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc    552446 Oct  5 14:52 pilot3.tar.gz
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc      5112 Oct  5 14:56 queuedata.json
[2025-10-06 17:21:59] -rwx------ 1 boinc boinc     36292 Oct  5 14:56 runpilot2-wrapper.sh
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc       100 Oct  6 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 17:21:59] -rwxr-xr-x 1 boinc boinc      7986 Oct  6 16:13 run_atlas
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc       105 Oct  6 16:13 job.xml
[2025-10-06 17:21:59] -rw-r--r-- 2 boinc boinc 217345831 Oct  6 16:13 EVNT.46376901._003118.pool.root.1
[2025-10-06 17:21:59] -rw-r--r-- 2 boinc boinc    565601 Oct  6 16:13 input.tar.gz
[2025-10-06 17:21:59] -rw-r--r-- 2 boinc boinc     15120 Oct  6 16:13 start_atlas.sh
[2025-10-06 17:21:59] drwxrwx--x 2 boinc boinc      4096 Oct  6 16:13 shared
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc         0 Oct  6 16:13 boinc_setup_complete
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc      6377 Oct  6 16:13 init_data.xml
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc         0 Oct  6 16:13 boinc_lockfile
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc      2519 Oct  6 16:13 pandaJob.out
[2025-10-06 17:21:59] -rw------- 1 boinc boinc    975002 Oct  6 16:13 agis_schedconf.cvmfs.json
[2025-10-06 17:21:59] -rw------- 1 boinc boinc   1560401 Oct  6 16:13 agis_ddmendpoints.agis.ALL.json
[2025-10-06 17:21:59] drwx------ 4 boinc boinc      4096 Oct  6 16:13 pilot3
[2025-10-06 17:21:59] -rw------- 1 boinc boinc 184813410 Oct  6 17:20 HITS.46376905._084909.pool.root.1
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc       529 Oct  6 17:20 boinc_task_state.xml
[2025-10-06 17:21:59] -rw------- 1 boinc boinc      1026 Oct  6 17:20 memory_monitor_summary.json
[2025-10-06 17:21:59] -rw------- 1 boinc boinc    250934 Oct  6 17:20 log.46376905._084909.job.log.tgz.1
[2025-10-06 17:21:59] -rw------- 1 boinc boinc      7763 Oct  6 17:20 heartbeat.json
[2025-10-06 17:21:59] -rw------- 1 boinc boinc        95 Oct  6 17:21 pilot_heartbeat.json
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc      8192 Oct  6 17:21 boinc_mmap_file
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc        27 Oct  6 17:21 wrapper_checkpoint.txt
[2025-10-06 17:21:59] -rw------- 1 boinc boinc      4823 Oct  6 17:21 pilotlog.txt
[2025-10-06 17:21:59] -rw------- 1 boinc boinc    598882 Oct  6 17:21 log.46376905._084909.job.log.1
[2025-10-06 17:21:59] -rw------- 1 boinc boinc       357 Oct  6 17:21 output.list
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc       620 Oct  6 17:21 runtime_log
[2025-10-06 17:21:59] -rw------- 1 boinc boinc    870400 Oct  6 17:21 result.tar.gz
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc      8777 Oct  6 17:21 runtime_log.err
[2025-10-06 17:21:59] -rw------- 1 boinc boinc       658 Oct  6 17:21 L22KDmlSdP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8MPNDmJlS3Bn.diag
[2025-10-06 17:21:59] -rw-r--r-- 1 boinc boinc      9115 Oct  6 17:21 stderr.txt
[2025-10-06 17:21:59] HITS file was successfully produced:
[2025-10-06 17:21:59] -rw------- 1 boinc boinc 184813410 Oct  6 17:20 shared/HITS.pool.root.1
[2025-10-06 17:21:59]  *** Contents of shared directory: ***
[2025-10-06 17:21:59] total 394168
[2025-10-06 17:21:59] -rw-r--r-- 2 boinc boinc 217345831 Oct  6 16:13 ATLAS.root_0
[2025-10-06 17:21:59] -rw-r--r-- 2 boinc boinc    565601 Oct  6 16:13 input.tar.gz
[2025-10-06 17:21:59] -rw-r--r-- 2 boinc boinc     15120 Oct  6 16:13 start_atlas.sh
[2025-10-06 17:21:59] -rw------- 1 boinc boinc 184813410 Oct  6 17:20 HITS.pool.root.1
[2025-10-06 17:21:59] -rw------- 1 boinc boinc    870400 Oct  6 17:21 result.tar.gz
17:22:00 (941190): run_atlas exited; CPU time 15152.119543
17:22:00 (941190): called boinc_finish(0)

</stderr_txt>
]]>

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