Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-06 13:11:19 (9184): vboxwrapper version 26210
2025-10-06 13:11:19 (9184): BOINC client version: 8.0.2
2025-10-06 13:11:20 (9184): Detected: VirtualBox VboxManage Interface (Version: 5.2.8)
2025-10-06 13:11:21 (9184): Successfully copied 'init_data.xml' to the shared directory.
2025-10-06 13:11:21 (9184): Create VM. (boinc_066c367114a29a01, slot#1)
2025-10-06 13:11:24 (9184): Setting Memory Size for VM. (4400MB)
2025-10-06 13:11:25 (9184): Setting CPU Count for VM. (4)
2025-10-06 13:11:26 (9184): Setting Chipset Options for VM.
2025-10-06 13:11:27 (9184): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-06 13:11:28 (9184): Setting Boot Options for VM.
2025-10-06 13:11:28 (9184): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-06 13:11:29 (9184): Enabling VM Network Access.
2025-10-06 13:11:30 (9184): Disabling USB Support for VM.
2025-10-06 13:11:30 (9184): Disabling COM Port Support for VM.
2025-10-06 13:11:31 (9184): Disabling LPT Port Support for VM.
2025-10-06 13:11:31 (9184): Disabling Audio Support for VM.
2025-10-06 13:11:31 (9184): Disabling Clipboard Support for VM.
2025-10-06 13:11:32 (9184): Disabling Drag and Drop Support for VM.
2025-10-06 13:11:32 (9184): Adding storage controller(s) to VM.
2025-10-06 13:11:32 (9184): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-06 13:11:33 (9184): Adding VirtualBox Guest Additions to VM.
2025-10-06 13:11:33 (9184): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-06 13:11:33 (9184): forwarding host port 62214 to guest port 80
2025-10-06 13:11:34 (9184): Enabling remote desktop for VM.
2025-10-06 13:11:35 (9184): Enabling shared directory for VM.
2025-10-06 13:11:35 (9184): Starting VM using VBoxManage interface. (boinc_066c367114a29a01, slot#1)
2025-10-06 13:11:40 (9184): Successfully started VM. (PID = '8596')
2025-10-06 13:11:40 (9184): Reporting VM Process ID to BOINC.
2025-10-06 13:11:40 (9184): Guest Log: BIOS: VirtualBox 5.2.8
2025-10-06 13:11:40 (9184): Guest Log: CPUID EDX: 0x178bfbff
2025-10-06 13:11:40 (9184): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-06 13:11:40 (9184): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-06 13:11:40 (9184): Detected: Web Application Enabled (http://localhost:62214)
2025-10-06 13:11:40 (9184): Detected: Remote Desktop Enabled (localhost:62215)
2025-10-06 13:11:40 (9184): Preference change detected
2025-10-06 13:11:40 (9184): Setting CPU throttle for VM. (100%)
2025-10-06 13:11:40 (9184): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-06 13:11:42 (9184): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-06 13:11:42 (9184): Guest Log: BIOS: Booting from Hard Disk...
2025-10-06 13:11:49 (9184): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-06 13:11:49 (9184): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-06 13:11:49 (9184): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-06 13:12:05 (9184): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-06 13:12:05 (9184): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-06 13:12:16 (9184): VM state change detected. (old = 'running', new = 'paused')
2025-10-06 13:12:36 (9184): VM state change detected. (old = 'paused', new = 'running')
2025-10-06 13:13:16 (9184): VM state change detected. (old = 'running', new = 'paused')
2025-10-06 13:13:36 (9184): VM state change detected. (old = 'paused', new = 'running')
2025-10-06 13:13:45 (9184): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.000127 main     Log opened 2025-10-06T13:13:05.424363000Z
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.000220 main     OS Product: Linux
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.000268 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.000295 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.000320 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.000321 main     Process ID: 1337
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.000322 main     Package type: LINUX_64BITS_GENERIC
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.002722 main     5.2.32 r132073 started. Verbose level = 0
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.003334 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.003444 main     Session 0 is about to close ...
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.003472 main     Stopping all guest processes ...
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.003497 main     Closing all guest files ...
2025-10-06 13:13:45 (9184): Guest Log: 00:00:00.003591 main     Ended.
2025-10-06 13:13:46 (9184): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-06 13:13:46 (9184): Guest Log: [INFO] Mounting shared directory
2025-10-06 13:13:46 (9184): Guest Log: [INFO] Checking for init_data.xml
2025-10-06 13:13:57 (9184): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-06 13:13:57 (9184): Guest Log: [INFO] Detected branch: prod
2025-10-06 13:13:57 (9184): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-06 13:13:57 (9184): Guest Log: Copying input files
2025-10-06 13:13:59 (9184): Guest Log: Copied input files into RunAtlas.
2025-10-06 13:13:59 (9184): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-06 13:13:59 (9184): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-06 13:13:59 (9184): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-06 13:13:59 (9184): Guest Log: Further information can be found at the LHC@home message board.
2025-10-06 13:14:34 (9184): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-06 13:14:34 (9184): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-06 13:14:34 (9184): Guest Log: 2.6.3.0 1609 0 30200 151397 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-06 13:14:37 (9184): Guest Log: copied the webapp to /var/www
2025-10-06 13:14:37 (9184): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-06 13:14:37 (9184): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-06 13:14:37 (9184): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-06 13:14:37 (9184): Guest Log:  *** Starting ATLAS job. (PandaID=6832339913 taskID=46376905) ***
2025-10-06 13:21:13 (9184): Guest Log:  *** Job finished ***
2025-10-06 13:21:13 (9184): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:24,958 | INFO     | PID=6022 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:24,959 | INFO     | found 0 job(s) in 20 queues
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:24,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:24,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:24,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:24,959 | INFO     | [monitor] control thread has ended
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:28,928 | INFO     | all workflow threads have been joined
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:28,929 | INFO     | end of generic workflow (traces error code: 0)
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:28,929 | INFO     | traces error code: 0
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:28,930 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:29,003 [wrapper] ==== pilot stdout END ====
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:29,007 [wrapper] ==== wrapper stdout RESUME ====
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:29,012 [wrapper] pilotpid: 6022
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:29,016 [wrapper] Pilot exit status: 0
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:32,501 [wrapper] pandaids: 6832339913
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:32,527 [wrapper] cleanup supervisor_pilot  6028 6023
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:32,533 [wrapper] Test setup, not cleaning
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:32,540 [wrapper] apfmon messages muted
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:32,546 [wrapper] ==== wrapper stdout END ====
2025-10-06 13:21:13 (9184): Guest Log: 2025-10-06 13:20:32,551 [wrapper] ==== wrapper stderr END ====
2025-10-06 13:21:13 (9184): Guest Log:  *** Error codes and diagnostics ***
2025-10-06 13:21:13 (9184): Guest Log:     "exeErrorCode": 65,
2025-10-06 13:21:13 (9184): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-10-06 13:21:13 (9184): Guest Log:     "pilotErrorCode": 1305,
2025-10-06 13:21:13 (9184): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-10-06 13:21:13 (9184): Guest Log:  *** Listing of results directory ***
2025-10-06 13:21:13 (9184): Guest Log: total 3948
2025-10-06 13:21:13 (9184): Guest Log: -rw-r--r--. 1 atlas atlas  552446 Oct  6 04:54 pilot3.tar.gz
2025-10-06 13:21:13 (9184): Guest Log: -rwx------. 1 atlas atlas   36292 Oct  6 05:20 runpilot2-wrapper.sh
2025-10-06 13:21:13 (9184): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Oct  6 05:20 queuedata.json
2025-10-06 13:21:13 (9184): Guest Log: -rwxr-xr-x. 1 atlas atlas    7109 Oct  6 13:13 init_data.xml
2025-10-06 13:21:13 (9184): Guest Log: -rwxr-xr-x. 1 atlas atlas  565590 Oct  6 13:13 input.tar.gz
2025-10-06 13:21:13 (9184): Guest Log: -rwxr-xr-x. 1 atlas atlas   15120 Oct  6 13:13 start_atlas.sh
2025-10-06 13:21:13 (9184): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct  6 13:13 EVNT.46376901._003934.pool.root.1 -> /data/./ATLAS.root_0
2025-10-06 13:21:13 (9184): Guest Log: -rw-r--r--. 1 atlas atlas    2516 Oct  6 13:13 pandaJob.out
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas  975011 Oct  6 13:16 agis_schedconf.cvmfs.json
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas 1560401 Oct  6 13:16 agis_ddmendpoints.agis.ALL.json
2025-10-06 13:21:13 (9184): Guest Log: drwx------. 4 atlas atlas    4096 Oct  6 13:16 pilot3
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas     962 Oct  6 13:17 memory_monitor_summary.json
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas   21038 Oct  6 13:17 log.46376905._106153.job.log.tgz.1
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas    8423 Oct  6 13:19 heartbeat.json
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas      95 Oct  6 13:20 pilot_heartbeat.json
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas    4991 Oct  6 13:20 pilotlog.txt
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas   87802 Oct  6 13:20 log.46376905._106153.job.log.1
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas     188 Oct  6 13:20 output.list
2025-10-06 13:21:13 (9184): Guest Log: -rw-r--r--. 1 atlas atlas     620 Oct  6 13:20 runtime_log
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas  133120 Oct  6 13:20 result.tar.gz
2025-10-06 13:21:13 (9184): Guest Log: -rw-r--r--. 1 atlas atlas    8519 Oct  6 13:20 runtime_log.err
2025-10-06 13:21:13 (9184): Guest Log: -rw-------. 1 atlas atlas     652 Oct  6 13:20 pzILDmLpsP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbbIMDmUPIMlm.diag
2025-10-06 13:21:13 (9184): Guest Log: Looking for outputfile HITS.46376905._106153.pool.root.1
2025-10-06 13:21:13 (9184): Guest Log: No HITS file was produced
2025-10-06 13:21:13 (9184): Guest Log: Successfully finished the ATLAS job!
2025-10-06 13:21:13 (9184): Guest Log: Copying the results back to the shared directory!
2025-10-06 13:21:13 (9184): Guest Log:  *** Contents of shared directory: ***
2025-10-06 13:21:13 (9184): Guest Log: total 210232
2025-10-06 13:21:13 (9184): Guest Log: -rwxrwxrwx. 1 root root 214546979 Oct  6 11:11 ATLAS.root_0
2025-10-06 13:21:13 (9184): Guest Log: -rwxrwxrwx. 1 root root      7109 Oct  6 11:11 init_data.xml
2025-10-06 13:21:13 (9184): Guest Log: -rwxrwxrwx. 1 root root    565590 Oct  6 11:11 input.tar.gz
2025-10-06 13:21:13 (9184): Guest Log: -rwxrwxrwx. 1 root root    133120 Oct  6 11:21 result.tar.gz
2025-10-06 13:21:13 (9184): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  6 11:11 start_atlas.sh
2025-10-06 13:21:13 (9184): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-06 13:21:13 (9184): VM Completion File Detected.
2025-10-06 13:21:13 (9184): Powering off VM.
2025-10-06 13:21:14 (9184): Successfully stopped VM.
2025-10-06 13:21:14 (9184): Deregistering VM. (boinc_066c367114a29a01, slot#1)
2025-10-06 13:21:14 (9184): Removing network bandwidth throttle group from VM.
2025-10-06 13:21:14 (9184): Removing VM from VirtualBox.
2025-10-06 13:21:20 (9184): called boinc_finish(0)

</stderr_txt>
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