Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 12:30:16 (5776): vboxwrapper version 26210
2025-10-09 12:30:16 (5776): BOINC client version: 8.2.4
2025-10-09 12:30:17 (5776): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-09 12:30:17 (5776): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 12:30:17 (5776): Create VM. (boinc_a4f1ec2363af57df, slot#0)
2025-10-09 12:30:18 (5776): Setting Memory Size for VM. (4200MB)
2025-10-09 12:30:18 (5776): Setting CPU Count for VM. (2)
2025-10-09 12:30:18 (5776): Setting Chipset Options for VM.
2025-10-09 12:30:19 (5776): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 12:30:19 (5776): Setting Boot Options for VM.
2025-10-09 12:30:19 (5776): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 12:30:20 (5776): Enabling VM Network Access.
2025-10-09 12:30:20 (5776): Disabling USB Support for VM.
2025-10-09 12:30:20 (5776): Disabling COM Port Support for VM.
2025-10-09 12:30:20 (5776): Disabling LPT Port Support for VM.
2025-10-09 12:30:21 (5776): Disabling Audio Support for VM.
2025-10-09 12:30:21 (5776): Disabling Clipboard Support for VM.
2025-10-09 12:30:21 (5776): Disabling Drag and Drop Support for VM.
2025-10-09 12:30:21 (5776): Adding storage controller(s) to VM.
2025-10-09 12:30:22 (5776): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 12:30:24 (5776): Adding VirtualBox Guest Additions to VM.
2025-10-09 12:30:24 (5776): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 12:30:24 (5776): forwarding host port 63704 to guest port 80
2025-10-09 12:30:25 (5776): Enabling remote desktop for VM.
2025-10-09 12:30:25 (5776): Enabling shared directory for VM.
2025-10-09 12:30:26 (5776): Starting VM using VBoxManage interface. (boinc_a4f1ec2363af57df, slot#0)
2025-10-09 12:30:32 (5776): Successfully started VM. (PID = '3664')
2025-10-09 12:30:32 (5776): Reporting VM Process ID to BOINC.
2025-10-09 12:30:32 (5776): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-09 12:30:32 (5776): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 12:30:32 (5776): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 12:30:32 (5776): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 12:30:32 (5776): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 12:30:32 (5776): Detected: Web Application Enabled (http://localhost:63704)
2025-10-09 12:30:32 (5776): Detected: Remote Desktop Enabled (localhost:63705)
2025-10-09 12:30:32 (5776): Preference change detected
2025-10-09 12:30:32 (5776): Setting CPU throttle for VM. (100%)
2025-10-09 12:30:33 (5776): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 12:30:34 (5776): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 12:30:34 (5776): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 12:30:37 (5776): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 12:30:37 (5776): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 12:30:37 (5776): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 12:30:45 (5776): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 12:30:45 (5776): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 12:31:00 (5776): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 12:31:00 (5776): Guest Log: 00:00:00.000220 main     Log opened 2025-10-09T12:30:58.754330000Z
2025-10-09 12:31:00 (5776): Guest Log: 00:00:00.000388 main     OS Product: Linux
2025-10-09 12:31:00 (5776): Guest Log: 00:00:00.000437 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 12:31:00 (5776): Guest Log: 00:00:00.000481 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 12:31:00 (5776): Guest Log: 00:00:00.000525 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 12:31:00 (5776): Guest Log: 00:00:00.000527 main     Process ID: 1274
2025-10-09 12:31:00 (5776): Guest Log: 00:00:00.000528 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 12:31:00 (5776): Guest Log: 00:00:00.025682 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 12:31:00 (5776): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 12:31:00 (5776): Guest Log: [INFO] Mounting shared directory
2025-10-09 12:31:01 (5776): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 12:31:05 (5776): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 12:31:05 (5776): Guest Log: [INFO] Detected branch: prod
2025-10-09 12:31:05 (5776): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 12:31:05 (5776): Guest Log: Copying input files
2025-10-09 12:31:07 (5776): Guest Log: Copied input files into RunAtlas.
2025-10-09 12:31:07 (5776): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-10-09 12:31:10 (5776): Guest Log: 00:00:10.059121 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 067 485 000ns (GuestNow=1 760 005 870 744 840 000 ns GuestLast=1 760 013 058 812 325 000 ns fSetTimeLastLoop=true )
2025-10-09 12:31:15 (5776): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 12:31:15 (5776): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 12:31:15 (5776): Guest Log: 2.6.3.0 1568 0 29528 151509 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-10-09 12:31:17 (5776): Guest Log: copied the webapp to /var/www
2025-10-09 12:31:17 (5776): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-09 12:31:17 (5776): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-09 12:31:17 (5776): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 12:31:17 (5776): Guest Log:  *** Starting ATLAS job. (PandaID=6832255895 taskID=46376905) ***
2025-10-09 14:10:40 (5776): Status Report: Elapsed Time: '6000.000000'
2025-10-09 14:10:40 (5776): Status Report: CPU Time: '10129.843750'
2025-10-09 16:25:48 (5776): Status Report: Elapsed Time: '12000.565590'
2025-10-09 16:25:48 (5776): Status Report: CPU Time: '25699.109375'
2025-10-09 18:51:14 (5776): Status Report: Elapsed Time: '18001.492207'
2025-10-09 18:51:14 (5776): Status Report: CPU Time: '42857.593750'
2025-10-09 21:08:32 (5776): Status Report: Elapsed Time: '24002.455456'
2025-10-09 21:08:33 (5776): Status Report: CPU Time: '59018.437500'
2025-10-09 22:52:53 (5776): Guest Log:  *** Job finished ***
2025-10-09 22:52:53 (5776): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:43,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:43,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:45,884 | INFO     | [monitor] cgroup control has ended
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:46,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090537744192)>', '<ExcThread(monitor, started 140089871030016)>']
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:47,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:47,274 | INFO     | [monitor] control thread has ended
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,723 | INFO     | all workflow threads have been joined
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,723 | INFO     | end of generic workflow (traces error code: 0)
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,723 | INFO     | traces error code: 0
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,867 [wrapper] ==== pilot stdout END ====
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,880 [wrapper] ==== wrapper stdout RESUME ====
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,886 [wrapper] pilotpid: 5922
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,891 [wrapper] Pilot exit status: 0
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,950 [wrapper] pandaids: 6832255895
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,989 [wrapper] cleanup supervisor_pilot 17998 5923
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:51,994 [wrapper] Test setup, not cleaning
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:52,000 [wrapper] apfmon messages muted
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:52,006 [wrapper] ==== wrapper stdout END ====
2025-10-09 22:52:53 (5776): Guest Log: 2025-10-09 20:52:52,013 [wrapper] ==== wrapper stderr END ====
2025-10-09 22:52:53 (5776): Guest Log:  *** Error codes and diagnostics ***
2025-10-09 22:52:53 (5776): Guest Log:     "exeErrorCode": 0,
2025-10-09 22:52:53 (5776): Guest Log:     "exeErrorDiag": "",
2025-10-09 22:52:53 (5776): Guest Log:     "pilotErrorCode": 0,
2025-10-09 22:52:53 (5776): Guest Log:     "pilotErrorDiag": "",
2025-10-09 22:52:53 (5776): Guest Log:  *** Listing of results directory ***
2025-10-09 22:52:53 (5776): Guest Log: total 194208
2025-10-09 22:52:53 (5776): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  6 01:37 pilot3.tar.gz
2025-10-09 22:52:53 (5776): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  6 01:48 runpilot2-wrapper.sh
2025-10-09 22:52:53 (5776): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  6 01:48 queuedata.json
2025-10-09 22:52:53 (5776): Guest Log: -rwxr-xr-x. 1 atlas atlas      8394 Oct  9 10:31 init_data.xml
2025-10-09 22:52:53 (5776): Guest Log: -rwxr-xr-x. 1 atlas atlas    565596 Oct  9 10:31 input.tar.gz
2025-10-09 22:52:53 (5776): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 10:31 start_atlas.sh
2025-10-09 22:52:53 (5776): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 10:31 EVNT.46376901._003787.pool.root.1 -> /data/./ATLAS.root_0
2025-10-09 22:52:53 (5776): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct  9 10:31 pandaJob.out
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas    979306 Oct  9 10:31 agis_schedconf.cvmfs.json
2025-10-09 22:52:53 (5776): Guest Log: drwx------. 4 atlas atlas      4096 Oct  9 10:32 pilot3
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas 183839609 Oct  9 20:50 HITS.46376905._102405.pool.root.1
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas      1027 Oct  9 20:51 memory_monitor_summary.json
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  9 20:51 agis_ddmendpoints.agis.ALL.json
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas    666908 Oct  9 20:51 log.46376905._102405.job.log.tgz.1
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas      7783 Oct  9 20:52 heartbeat.json
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas        95 Oct  9 20:52 pilot_heartbeat.json
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas      4805 Oct  9 20:52 pilotlog.txt
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas   4937693 Oct  9 20:52 log.46376905._102405.job.log.1
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas       357 Oct  9 20:52 output.list
2025-10-09 22:52:53 (5776): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  9 20:52 runtime_log
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas   5621760 Oct  9 20:52 result.tar.gz
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas       664 Oct  9 20:52 SBRODmnVpP8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8BIMDmQWhIRn.diag
2025-10-09 22:52:53 (5776): Guest Log: -rw-r--r--. 1 atlas atlas      8645 Oct  9 20:52 runtime_log.err
2025-10-09 22:52:53 (5776): Guest Log: Looking for outputfile HITS.46376905._102405.pool.root.1
2025-10-09 22:52:53 (5776): Guest Log: HITS file was successfully produced
2025-10-09 22:52:53 (5776): Guest Log: -rw-------. 1 atlas atlas 183839609 Oct  9 20:50 /home/atlas/RunAtlas/HITS.46376905._102405.pool.root.1
2025-10-09 22:52:55 (5776): Guest Log: Successfully finished the ATLAS job!
2025-10-09 22:52:55 (5776): Guest Log: Copying the results back to the shared directory!
2025-10-09 22:52:55 (5776): Guest Log:  *** Contents of shared directory: ***
2025-10-09 22:52:55 (5776): Guest Log: total 396928
2025-10-09 22:52:55 (5776): Guest Log: -rwxrwxrwx. 1 root root 216391622 Oct  9 10:30 ATLAS.root_0
2025-10-09 22:52:55 (5776): Guest Log: -rwxrwxrwx. 1 root root 183839609 Oct  9 20:52 HITS.pool.root.1
2025-10-09 22:52:55 (5776): Guest Log: -rwxrwxrwx. 1 root root      8394 Oct  9 10:30 init_data.xml
2025-10-09 22:52:55 (5776): Guest Log: -rwxrwxrwx. 1 root root    565596 Oct  6 09:29 input.tar.gz
2025-10-09 22:52:55 (5776): Guest Log: -rwxrwxrwx. 1 root root   5621760 Oct  9 20:52 result.tar.gz
2025-10-09 22:52:55 (5776): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  6 09:29 start_atlas.sh
2025-10-09 22:52:55 (5776): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-09 22:52:55 (5776): VM Completion File Detected.
2025-10-09 22:52:55 (5776): Powering off VM.
2025-10-09 22:52:55 (5776): Successfully stopped VM.
2025-10-09 22:52:55 (5776): Deregistering VM. (boinc_a4f1ec2363af57df, slot#0)
2025-10-09 22:52:55 (5776): Removing network bandwidth throttle group from VM.
2025-10-09 22:52:56 (5776): Removing VM from VirtualBox.
2025-10-09 22:53:01 (5776): called boinc_finish(0)

</stderr_txt>
]]>

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