Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-08 15:22:41 (9384): vboxwrapper version 26210
2025-10-08 15:22:41 (9384): BOINC client version: 8.2.4
2025-10-08 15:22:42 (9384): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-08 15:22:42 (9384): Successfully copied 'init_data.xml' to the shared directory.
2025-10-08 15:22:42 (9384): Create VM. (boinc_30518b24539fed61, slot#0)
2025-10-08 15:22:43 (9384): Setting Memory Size for VM. (4200MB)
2025-10-08 15:22:43 (9384): Setting CPU Count for VM. (2)
2025-10-08 15:22:43 (9384): Setting Chipset Options for VM.
2025-10-08 15:22:44 (9384): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-08 15:22:44 (9384): Setting Boot Options for VM.
2025-10-08 15:22:45 (9384): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-08 15:22:45 (9384): Enabling VM Network Access.
2025-10-08 15:22:45 (9384): Disabling USB Support for VM.
2025-10-08 15:22:45 (9384): Disabling COM Port Support for VM.
2025-10-08 15:22:46 (9384): Disabling LPT Port Support for VM.
2025-10-08 15:22:46 (9384): Disabling Audio Support for VM.
2025-10-08 15:22:46 (9384): Disabling Clipboard Support for VM.
2025-10-08 15:22:46 (9384): Disabling Drag and Drop Support for VM.
2025-10-08 15:22:47 (9384): Adding storage controller(s) to VM.
2025-10-08 15:22:47 (9384): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-08 15:22:49 (9384): Adding VirtualBox Guest Additions to VM.
2025-10-08 15:22:49 (9384): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-08 15:22:49 (9384): forwarding host port 60111 to guest port 80
2025-10-08 15:22:50 (9384): Enabling remote desktop for VM.
2025-10-08 15:22:50 (9384): Enabling shared directory for VM.
2025-10-08 15:22:51 (9384): Starting VM using VBoxManage interface. (boinc_30518b24539fed61, slot#0)
2025-10-08 15:22:57 (9384): Successfully started VM. (PID = '9420')
2025-10-08 15:22:57 (9384): Reporting VM Process ID to BOINC.
2025-10-08 15:22:57 (9384): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-08 15:22:57 (9384): Guest Log: CPUID EDX: 0x178bfbff
2025-10-08 15:22:57 (9384): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-08 15:22:57 (9384): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-08 15:22:57 (9384): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-08 15:22:57 (9384): Detected: Web Application Enabled (http://localhost:60111)
2025-10-08 15:22:57 (9384): Detected: Remote Desktop Enabled (localhost:60112)
2025-10-08 15:22:57 (9384): Preference change detected
2025-10-08 15:22:57 (9384): Setting CPU throttle for VM. (100%)
2025-10-08 15:22:58 (9384): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-08 15:22:59 (9384): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-08 15:22:59 (9384): Guest Log: BIOS: Booting from Hard Disk...
2025-10-08 15:23:02 (9384): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-08 15:23:02 (9384): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-08 15:23:02 (9384): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-08 15:23:08 (9384): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-08 15:23:08 (9384): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-08 15:23:22 (9384): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-08 15:23:22 (9384): Guest Log: 00:00:00.000245 main     Log opened 2025-10-08T15:23:20.654322000Z
2025-10-08 15:23:22 (9384): Guest Log: 00:00:00.000384 main     OS Product: Linux
2025-10-08 15:23:22 (9384): Guest Log: 00:00:00.000433 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-08 15:23:22 (9384): Guest Log: 00:00:00.000494 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-08 15:23:22 (9384): Guest Log: 00:00:00.000568 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-08 15:23:22 (9384): Guest Log: 00:00:00.000570 main     Process ID: 1273
2025-10-08 15:23:22 (9384): Guest Log: 00:00:00.000571 main     Package type: LINUX_64BITS_GENERIC
2025-10-08 15:23:22 (9384): Guest Log: 00:00:00.001985 main     5.2.32 r132073 started. Verbose level = 0
2025-10-08 15:23:22 (9384): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-08 15:23:22 (9384): Guest Log: [INFO] Mounting shared directory
2025-10-08 15:23:23 (9384): Guest Log: [INFO] Checking for init_data.xml
2025-10-08 15:23:28 (9384): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-08 15:23:28 (9384): Guest Log: [INFO] Detected branch: prod
2025-10-08 15:23:28 (9384): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-08 15:23:28 (9384): Guest Log: Copying input files
2025-10-08 15:23:30 (9384): Guest Log: Copied input files into RunAtlas.
2025-10-08 15:23:30 (9384): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-10-08 15:23:32 (9384): Guest Log: 00:00:10.041683 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 024 364 000ns (GuestNow=1 759 929 812 651 175 000 ns GuestLast=1 759 937 000 675 539 000 ns fSetTimeLastLoop=true )
2025-10-08 15:23:39 (9384): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-08 15:23:39 (9384): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-08 15:23:39 (9384): Guest Log: 2.6.3.0 1550 0 29588 151473 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-10-08 15:23:41 (9384): Guest Log: copied the webapp to /var/www
2025-10-08 15:23:41 (9384): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-08 15:23:41 (9384): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-08 15:23:41 (9384): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-08 15:23:41 (9384): Guest Log:  *** Starting ATLAS job. (PandaID=6832199698 taskID=46376905) ***
2025-10-08 17:03:07 (9384): Status Report: Elapsed Time: '6000.000000'
2025-10-08 17:03:07 (9384): Status Report: CPU Time: '10229.765625'
2025-10-08 18:43:29 (9384): Status Report: Elapsed Time: '12000.000000'
2025-10-08 18:43:29 (9384): Status Report: CPU Time: '20727.328125'
2025-10-08 20:23:44 (9384): Status Report: Elapsed Time: '18000.000000'
2025-10-08 20:23:44 (9384): Status Report: CPU Time: '31836.906250'
2025-10-08 22:03:55 (9384): Status Report: Elapsed Time: '24000.000000'
2025-10-08 22:03:55 (9384): Status Report: CPU Time: '43005.015625'
2025-10-08 23:44:05 (9384): Status Report: Elapsed Time: '30000.000000'
2025-10-08 23:44:05 (9384): Status Report: CPU Time: '54167.406250'
2025-10-09 01:23:10 (9384): Guest Log:  *** Job finished ***
2025-10-09 01:23:10 (9384): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:22:46,057 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:22:46,057 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:02,310 | INFO     | [monitor] cgroup control has ended
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:03,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763060619072)>', '<ExcThread(monitor, started 139762170054400)>']
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:04,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:04,104 | INFO     | [monitor] control thread has ended
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:08,900 | INFO     | all workflow threads have been joined
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:08,901 | INFO     | end of generic workflow (traces error code: 0)
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:08,901 | INFO     | traces error code: 0
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:08,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:09,059 [wrapper] ==== pilot stdout END ====
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:09,065 [wrapper] ==== wrapper stdout RESUME ====
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:09,070 [wrapper] pilotpid: 5924
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:09,076 [wrapper] Pilot exit status: 0
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:09,217 [wrapper] pandaids: 6832199698
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:09,266 [wrapper] cleanup supervisor_pilot 15029 5925
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:09,273 [wrapper] Test setup, not cleaning
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:09,279 [wrapper] apfmon messages muted
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:09,285 [wrapper] ==== wrapper stdout END ====
2025-10-09 01:23:10 (9384): Guest Log: 2025-10-08 23:23:09,291 [wrapper] ==== wrapper stderr END ====
2025-10-09 01:23:10 (9384): Guest Log:  *** Error codes and diagnostics ***
2025-10-09 01:23:10 (9384): Guest Log:     "exeErrorCode": 0,
2025-10-09 01:23:10 (9384): Guest Log:     "exeErrorDiag": "",
2025-10-09 01:23:10 (9384): Guest Log:     "pilotErrorCode": 0,
2025-10-09 01:23:10 (9384): Guest Log:     "pilotErrorDiag": "",
2025-10-09 01:23:10 (9384): Guest Log:  *** Listing of results directory ***
2025-10-09 01:23:10 (9384): Guest Log: total 185852
2025-10-09 01:23:10 (9384): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  6 00:57 pilot3.tar.gz
2025-10-09 01:23:10 (9384): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  6 01:00 runpilot2-wrapper.sh
2025-10-09 01:23:10 (9384): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  6 01:00 queuedata.json
2025-10-09 01:23:10 (9384): Guest Log: -rwxr-xr-x. 1 atlas atlas      8394 Oct  8 13:23 init_data.xml
2025-10-09 01:23:10 (9384): Guest Log: -rwxr-xr-x. 1 atlas atlas    565596 Oct  8 13:23 input.tar.gz
2025-10-09 01:23:10 (9384): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  8 13:23 start_atlas.sh
2025-10-09 01:23:10 (9384): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  8 13:23 EVNT.46376901._003751.pool.root.1 -> /data/./ATLAS.root_0
2025-10-09 01:23:10 (9384): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct  8 13:23 pandaJob.out
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas    979369 Oct  8 13:24 agis_schedconf.cvmfs.json
2025-10-09 01:23:10 (9384): Guest Log: drwx------. 4 atlas atlas      4096 Oct  8 13:24 pilot3
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas 175529086 Oct  8 23:21 HITS.46376905._101462.pool.root.1
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas      1025 Oct  8 23:21 memory_monitor_summary.json
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  8 23:21 agis_ddmendpoints.agis.ALL.json
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas    650109 Oct  8 23:21 log.46376905._101462.job.log.tgz.1
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas      7781 Oct  8 23:22 heartbeat.json
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas        95 Oct  8 23:22 pilot_heartbeat.json
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas      4877 Oct  8 23:23 pilotlog.txt
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas   4830195 Oct  8 23:23 log.46376905._101462.job.log.1
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas       357 Oct  8 23:23 output.list
2025-10-09 01:23:10 (9384): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  8 23:23 runtime_log
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas   5498880 Oct  8 23:23 result.tar.gz
2025-10-09 01:23:10 (9384): Guest Log: -rw-r--r--. 1 atlas atlas      8645 Oct  8 23:23 runtime_log.err
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas       664 Oct  8 23:23 cY9LDmUloP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmI4HMDmbho79n.diag
2025-10-09 01:23:10 (9384): Guest Log: Looking for outputfile HITS.46376905._101462.pool.root.1
2025-10-09 01:23:10 (9384): Guest Log: HITS file was successfully produced
2025-10-09 01:23:10 (9384): Guest Log: -rw-------. 1 atlas atlas 175529086 Oct  8 23:21 /home/atlas/RunAtlas/HITS.46376905._101462.pool.root.1
2025-10-09 01:23:11 (9384): Guest Log: Successfully finished the ATLAS job!
2025-10-09 01:23:11 (9384): Guest Log: Copying the results back to the shared directory!
2025-10-09 01:23:12 (9384): Guest Log:  *** Contents of shared directory: ***
2025-10-09 01:23:12 (9384): Guest Log: total 388180
2025-10-09 01:23:12 (9384): Guest Log: -rwxrwxrwx. 1 root root 215866835 Oct  8 13:22 ATLAS.root_0
2025-10-09 01:23:12 (9384): Guest Log: -rwxrwxrwx. 1 root root 175529086 Oct  8 23:23 HITS.pool.root.1
2025-10-09 01:23:12 (9384): Guest Log: -rwxrwxrwx. 1 root root      8394 Oct  8 13:22 init_data.xml
2025-10-09 01:23:12 (9384): Guest Log: -rwxrwxrwx. 1 root root    565596 Oct  6 09:28 input.tar.gz
2025-10-09 01:23:12 (9384): Guest Log: -rwxrwxrwx. 1 root root   5498880 Oct  8 23:23 result.tar.gz
2025-10-09 01:23:12 (9384): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  6 09:28 start_atlas.sh
2025-10-09 01:23:12 (9384): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-09 01:23:12 (9384): VM Completion File Detected.
2025-10-09 01:23:12 (9384): Powering off VM.
2025-10-09 01:23:12 (9384): Successfully stopped VM.
2025-10-09 01:23:12 (9384): Deregistering VM. (boinc_30518b24539fed61, slot#0)
2025-10-09 01:23:12 (9384): Removing network bandwidth throttle group from VM.
2025-10-09 01:23:13 (9384): Removing VM from VirtualBox.
2025-10-09 01:23:18 (9384): called boinc_finish(0)

</stderr_txt>
]]>

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