Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:18:24 (5712): wrapper (7.7.26015): starting
07:18:24 (5712): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 07:18:24] Arguments: --nthreads 8
[2025-10-07 07:18:24] Threads: 8
[2025-10-07 07:18:24] Checking for CVMFS
[2025-10-07 07:18:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 07:18:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 07:18:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 07:18:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 07:18:27] 2.11.2.0 23903 10918 81680 151425 3 60 23730994 25165824 4632 130560 0 3650148 99.971 729959 852 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 07:18:27] CVMFS is ok
[2025-10-07 07:18:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 07:18:27] Checking for apptainer binary...
[2025-10-07 07:18:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 07:18:27] Running /usr/bin/apptainer --version
[2025-10-07 07:18:27] apptainer version 1.3.2-1.el7
[2025-10-07 07:18:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 07:18:55] cg-vwn444.simple-grid.lan
[2025-10-07 07:18:55] apptainer works
[2025-10-07 07:18:55] Set ATHENA_PROC_NUMBER=8
[2025-10-07 07:18:55] Set ATHENA_CORE_NUMBER=8
[2025-10-07 07:18:55] Starting ATLAS job with PandaID=6832322678
[2025-10-07 07:18:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 11:15:03]  *** The last 200 lines of the pilot log: ***
[2025-10-07 11:15:03] 2025-10-07 09:13:52,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 11:15:03] 2025-10-07 09:13:52,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 11:15:03] 2025-10-07 09:13:52,401 | INFO     | fitting pss+swap vs Time
[2025-10-07 11:15:03] 2025-10-07 09:13:52,402 | INFO     | sum of square deviations: 3256879670.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,403 | INFO     | sum of deviations: 55623920489.00002
[2025-10-07 11:15:03] 2025-10-07 09:13:52,403 | INFO     | mean x: 1759821647.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,404 | INFO     | mean y: 2465913.0365296802
[2025-10-07 11:15:03] 2025-10-07 09:13:52,404 | INFO     | -- intersect: -30053351091.571766
[2025-10-07 11:15:03] 2025-10-07 09:13:52,404 | INFO     | intersect: -30053351091.571766
[2025-10-07 11:15:03] 2025-10-07 09:13:52,404 | INFO     | chi2: 8.259309599400765
[2025-10-07 11:15:03] 2025-10-07 09:13:52,405 | INFO     | sum of square deviations: 3038856977.5
[2025-10-07 11:15:03] 2025-10-07 09:13:52,406 | INFO     | sum of deviations: 69298398764.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,407 | INFO     | mean x: 1759821494.5
[2025-10-07 11:15:03] 2025-10-07 09:13:52,407 | INFO     | mean y: 2475289.9813084113
[2025-10-07 11:15:03] 2025-10-07 09:13:52,407 | INFO     | -- intersect: -40128670263.18891
[2025-10-07 11:15:03] 2025-10-07 09:13:52,407 | INFO     | intersect: -40128670263.18891
[2025-10-07 11:15:03] 2025-10-07 09:13:52,407 | INFO     | chi2: 7.572891325013161
[2025-10-07 11:15:03] 2025-10-07 09:13:52,407 | INFO     | current chi2=7.572891325013161 (change=8.310843250595743 %)
[2025-10-07 11:15:03] 2025-10-07 09:13:52,422 | INFO     | right removable region: 213
[2025-10-07 11:15:03] 2025-10-07 09:13:52,422 | INFO     | sum of square deviations: 3038856977.5
[2025-10-07 11:15:03] 2025-10-07 09:13:52,424 | INFO     | sum of deviations: -21747973150.000008
[2025-10-07 11:15:03] 2025-10-07 09:13:52,424 | INFO     | mean x: 1759821799.5
[2025-10-07 11:15:03] 2025-10-07 09:13:52,424 | INFO     | mean y: 2519996.214953271
[2025-10-07 11:15:03] 2025-10-07 09:13:52,425 | INFO     | -- intersect: 12596912403.519583
[2025-10-07 11:15:03] 2025-10-07 09:13:52,425 | INFO     | intersect: 12596912403.519583
[2025-10-07 11:15:03] 2025-10-07 09:13:52,425 | INFO     | chi2: 3.1246831326831974
[2025-10-07 11:15:03] 2025-10-07 09:13:52,425 | INFO     | current chi2=3.1246831326831974 (change=62.16774422755746 %)
[2025-10-07 11:15:03] 2025-10-07 09:13:52,426 | INFO     | sum of square deviations: 2830787960.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,427 | INFO     | sum of deviations: -69564690238.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,428 | INFO     | mean x: 1759821952.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,428 | INFO     | mean y: 2554878.784688995
[2025-10-07 11:15:03] 2025-10-07 09:13:52,428 | INFO     | -- intersect: 43248983327.24838
[2025-10-07 11:15:03] 2025-10-07 09:13:52,428 | INFO     | intersect: 43248983327.24838
[2025-10-07 11:15:03] 2025-10-07 09:13:52,428 | INFO     | chi2: 1.0309821238015777
[2025-10-07 11:15:03] 2025-10-07 09:13:52,429 | INFO     | current chi2=1.0309821238015777 (change=67.0052264494332 %)
[2025-10-07 11:15:03] 2025-10-07 09:13:52,429 | INFO     | sum of square deviations: 2632440055.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,431 | INFO     | sum of deviations: -70455243939.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,431 | INFO     | mean x: 1759822104.5
[2025-10-07 11:15:03] 2025-10-07 09:13:52,431 | INFO     | mean y: 2555501.382352941
[2025-10-07 11:15:03] 2025-10-07 09:13:52,431 | INFO     | -- intersect: 47102847652.87518
[2025-10-07 11:15:03] 2025-10-07 09:13:52,431 | INFO     | intersect: 47102847652.87518
[2025-10-07 11:15:03] 2025-10-07 09:13:52,432 | INFO     | chi2: 0.9840888548891089
[2025-10-07 11:15:03] 2025-10-07 09:13:52,432 | INFO     | current chi2=0.9840888548891089 (change=4.548407564968979 %)
[2025-10-07 11:15:03] 2025-10-07 09:13:52,432 | INFO     | left removable region: 30
[2025-10-07 11:15:03] 2025-10-07 09:13:52,432 | INFO     | sum of square deviations: 1900284932.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,434 | INFO     | sum of deviations: -38312355278.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,434 | INFO     | mean x: 1759822379.0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,434 | INFO     | mean y: 2553382.661202186
[2025-10-07 11:15:03] 2025-10-07 09:13:52,434 | INFO     | -- intersect: 35482990592.39179
[2025-10-07 11:15:03] 2025-10-07 09:13:52,434 | INFO     | intersect: 35482990592.39179
[2025-10-07 11:15:03] 2025-10-07 09:13:52,434 | INFO     | chi2: 0.17858305504060157
[2025-10-07 11:15:03] 2025-10-07 09:13:52,435 | INFO     | -- intersect: 35482990592.39179
[2025-10-07 11:15:03] 2025-10-07 09:13:52,435 | INFO     | current memory leak: -20.16 B/s (using 183 data points, chi2=0.18)
[2025-10-07 11:15:03] 2025-10-07 09:13:52,435 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-07 11:15:03] 2025-10-07 09:13:52,436 | INFO     | ..............................
[2025-10-07 11:15:03] 2025-10-07 09:13:52,436 | INFO     | . Timing measurements:
[2025-10-07 11:15:03] 2025-10-07 09:13:52,436 | INFO     | . get job = 0 s
[2025-10-07 11:15:03] 2025-10-07 09:13:52,436 | INFO     | . initial setup = 10 s
[2025-10-07 11:15:03] 2025-10-07 09:13:52,436 | INFO     | . payload setup = 127 s
[2025-10-07 11:15:03] 2025-10-07 09:13:52,436 | INFO     | . stage-in = 0 s
[2025-10-07 11:15:03] 2025-10-07 09:13:52,436 | INFO     | . payload execution = 13483 s
[2025-10-07 11:15:03] 2025-10-07 09:13:52,436 | INFO     | . stage-out = 5 s
[2025-10-07 11:15:03] 2025-10-07 09:13:52,436 | INFO     | . log creation = 1 s
[2025-10-07 11:15:03] 2025-10-07 09:13:52,436 | INFO     | ..............................
[2025-10-07 11:15:03] 2025-10-07 09:13:52,588 | INFO     | 
[2025-10-07 11:15:03] 2025-10-07 09:13:52,588 | INFO     | job summary report
[2025-10-07 11:15:03] 2025-10-07 09:13:52,588 | INFO     | --------------------------------------------------
[2025-10-07 11:15:03] 2025-10-07 09:13:52,588 | INFO     | PanDA job id: 6832322678
[2025-10-07 11:15:03] 2025-10-07 09:13:52,588 | INFO     | task id: 46376905
[2025-10-07 11:15:03] 2025-10-07 09:13:52,588 | INFO     | errors: (none)
[2025-10-07 11:15:03] 2025-10-07 09:13:52,589 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 11:15:03] 2025-10-07 09:13:52,589 | INFO     | pilot state: finished 
[2025-10-07 11:15:03] 2025-10-07 09:13:52,589 | INFO     | transexitcode: 0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,589 | INFO     | exeerrorcode: 0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,589 | INFO     | exeerrordiag: 
[2025-10-07 11:15:03] 2025-10-07 09:13:52,589 | INFO     | exitcode: 0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,589 | INFO     | exitmsg: OK
[2025-10-07 11:15:03] 2025-10-07 09:13:52,589 | INFO     | cpuconsumptiontime: 50405 s
[2025-10-07 11:15:03] 2025-10-07 09:13:52,589 | INFO     | nevents: 400
[2025-10-07 11:15:03] 2025-10-07 09:13:52,589 | INFO     | neventsw: 0
[2025-10-07 11:15:03] 2025-10-07 09:13:52,590 | INFO     | pid: 16071
[2025-10-07 11:15:03] 2025-10-07 09:13:52,590 | INFO     | pgrp: 16071
[2025-10-07 11:15:03] 2025-10-07 09:13:52,590 | INFO     | corecount: 8
[2025-10-07 11:15:03] 2025-10-07 09:13:52,590 | INFO     | event service: False
[2025-10-07 11:15:03] 2025-10-07 09:13:52,590 | INFO     | sizes: {0: 2348583, 1: 2348838, 12: 2348838, 23: 2348866, 34: 2348894, 44: 2348922, 55: 2349078, 66: 2349106, 76: 2349336, 77: 2349452, 87: 2349508, 13615: 2379684
[2025-10-07 11:15:03] 2025-10-07 09:13:52,590 | INFO     | --------------------------------------------------
[2025-10-07 11:15:03] 2025-10-07 09:13:52,590 | INFO     | 
[2025-10-07 11:15:03] 2025-10-07 09:13:52,590 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-07 11:15:03] 2025-10-07 09:13:52,916 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,916 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,917 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 11:15:03] 2025-10-07 09:13:52,918 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,918 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 11:15:03] 2025-10-07 09:13:52,918 | INFO     | job 6832322678 has completed (purged errors)
[2025-10-07 11:15:03] 2025-10-07 09:13:52,918 | INFO     | overall cleanup function is called
[2025-10-07 11:15:03] 2025-10-07 09:13:53,927 | INFO     | --- collectZombieJob: --- 10, [16071]
[2025-10-07 11:15:03] 2025-10-07 09:13:53,927 | INFO     | zombie collector waiting for pid 16071
[2025-10-07 11:15:03] 2025-10-07 09:13:53,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 11:15:03] 2025-10-07 09:13:53,927 | INFO     | collected zombie processes
[2025-10-07 11:15:03] 2025-10-07 09:13:53,927 | INFO     | will attempt to kill all subprocesses of pid=16071
[2025-10-07 11:15:03] 2025-10-07 09:13:54,045 | INFO     | process IDs to be killed: [16071] (in reverse order)
[2025-10-07 11:15:03] 2025-10-07 09:13:54,694 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 11:15:03] 2025-10-07 09:13:54,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 11:15:03] 2025-10-07 09:13:54,698 | INFO     | did not find any defunct processes belonging to 16071
[2025-10-07 11:15:03] 2025-10-07 09:13:54,701 | INFO     | did not find any defunct processes belonging to 16071
[2025-10-07 11:15:03] 2025-10-07 09:13:54,702 | INFO     | ready for new job
[2025-10-07 11:15:03] 2025-10-07 09:13:54,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 11:15:03] 2025-10-07 09:13:54,704 | INFO     | ***************************************
[2025-10-07 11:15:03] 2025-10-07 09:13:54,704 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 11:15:03] 2025-10-07 09:13:54,704 | INFO     | ***************************************
[2025-10-07 11:15:03] 2025-10-07 09:13:54,704 | INFO     | 
[2025-10-07 11:15:03] 2025-10-07 09:13:54,705 | INFO     | pilot is running in a VM
[2025-10-07 11:15:03] 2025-10-07 09:13:54,705 | INFO     | architecture information:
[2025-10-07 11:15:03] 2025-10-07 09:13:54,711 | INFO     | executing command: cat /etc/os-release
[2025-10-07 11:15:03] 2025-10-07 09:13:54,938 | INFO     | cat /etc/os-release:
[2025-10-07 11:15:03] NAME="CentOS Linux"
[2025-10-07 11:15:03] VERSION="7 (Core)"
[2025-10-07 11:15:03] ID="centos"
[2025-10-07 11:15:03] ID_LIKE="rhel fedora"
[2025-10-07 11:15:03] VERSION_ID="7"
[2025-10-07 11:15:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 11:15:03] ANSI_COLOR="0;31"
[2025-10-07 11:15:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 11:15:03] HOME_URL="https://www.centos.org/"
[2025-10-07 11:15:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 11:15:03] 
[2025-10-07 11:15:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 11:15:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 11:15:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 11:15:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 11:15:03] 
[2025-10-07 11:15:03] 2025-10-07 09:13:54,939 | INFO     | ***************************************
[2025-10-07 11:15:03] 2025-10-07 09:13:55,443 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-07 11:15:03] 2025-10-07 09:13:55,685 | INFO     | sufficient remaining disk space (495759392768 B)
[2025-10-07 11:15:03] 2025-10-07 09:13:55,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 11:15:03] 2025-10-07 09:13:55,685 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 11:15:03] 2025-10-07 09:13:55,685 | INFO     | update_server=False
[2025-10-07 11:15:03] 2025-10-07 09:13:55,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 11:15:03] 2025-10-07 09:13:55,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 11:15:03] 2025-10-07 09:13:55,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:15:03] 2025-10-07 09:13:55,687 | INFO     | aborting loop
[2025-10-07 11:15:03] 2025-10-07 09:13:55,819 | INFO     | all data control threads have been joined
[2025-10-07 11:15:03] 2025-10-07 09:13:55,933 | INFO     | all job control threads have been joined
[2025-10-07 11:15:03] 2025-10-07 09:13:56,692 | INFO     | [job] retrieve thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:56,693 | INFO     | [job] job monitor thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:56,745 | INFO     | all payload control threads have been joined
[2025-10-07 11:15:03] 2025-10-07 09:13:56,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:56,825 | INFO     | [data] control thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:56,894 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:56,939 | INFO     | [job] control thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:57,434 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:57,468 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:57,493 | INFO     | [data] copytool_in thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:57,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 11:15:03] 2025-10-07 09:13:57,576 | INFO     | [payload] failed_post thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:57,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:15:03] 2025-10-07 09:13:57,693 | INFO     | [data] copytool_out thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:57,751 | INFO     | [payload] control thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:57,862 | INFO     | [job] validate thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:58,100 | INFO     | [payload] validate_post thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:13:58,613 | INFO     | [job] queue monitor thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:14:01,549 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 11:15:03] 2025-10-07 09:14:24,743 | INFO     | PID=9528 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-07 11:15:03] 2025-10-07 09:14:24,743 | INFO     | .. there are 9 such processes running
[2025-10-07 11:15:03] 2025-10-07 09:14:24,743 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 11:15:03] 2025-10-07 09:14:24,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 11:15:03] 2025-10-07 09:14:24,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 11:15:03] 2025-10-07 09:14:51,657 | INFO     | [monitor] cgroup control has ended
[2025-10-07 11:15:03] 2025-10-07 09:14:52,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140402661054272)>', '<ExcThread(monitor, started 140401985963776)>']
[2025-10-07 11:15:03] 2025-10-07 09:14:52,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 11:15:03] 2025-10-07 09:14:52,910 | INFO     | [monitor] control thread has ended
[2025-10-07 11:15:03] 2025-10-07 09:14:57,690 | INFO     | all workflow threads have been joined
[2025-10-07 11:15:03] 2025-10-07 09:14:57,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 11:15:03] 2025-10-07 09:14:57,690 | INFO     | traces error code: 0
[2025-10-07 11:15:03] 2025-10-07 09:14:57,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 11:15:03] 2025-10-07 09:14:58,238 [wrapper] ==== pilot stdout END ====
[2025-10-07 11:15:03] 2025-10-07 09:14:58,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 11:15:03] 2025-10-07 09:14:58,379 [wrapper] pilotpid: 9528
[2025-10-07 11:15:03] 2025-10-07 09:14:58,478 [wrapper] Pilot exit status: 0
[2025-10-07 11:15:03] 2025-10-07 09:14:58,967 [wrapper] pandaids: 6832322678
[2025-10-07 11:15:03] 2025-10-07 09:15:00,101 [wrapper] cleanup supervisor_pilot  7591 9529
[2025-10-07 11:15:03] 2025-10-07 09:15:00,164 [wrapper] Test setup, not cleaning
[2025-10-07 11:15:03] 2025-10-07 09:15:00,234 [wrapper] apfmon messages muted
[2025-10-07 11:15:03] 2025-10-07 09:15:00,326 [wrapper] ==== wrapper stdout END ====
[2025-10-07 11:15:03] 2025-10-07 09:15:00,432 [wrapper] ==== wrapper stderr END ====
[2025-10-07 11:15:03]  *** Error codes and diagnostics ***
[2025-10-07 11:15:03]     "exeErrorCode": 0,
[2025-10-07 11:15:03]     "exeErrorDiag": "",
[2025-10-07 11:15:03]     "pilotErrorCode": 0,
[2025-10-07 11:15:03]     "pilotErrorDiag": "",
[2025-10-07 11:15:03]  *** Listing of results directory ***
[2025-10-07 11:15:03] total 399436
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc    552446 Oct  6 05:29 pilot3.tar.gz
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc      5112 Oct  6 06:03 queuedata.json
[2025-10-07 11:15:03] -rwx------. 1 boinc boinc     36292 Oct  6 06:05 runpilot2-wrapper.sh
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc       100 Oct  7 07:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 11:15:03] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 07:18 run_atlas
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc       105 Oct  7 07:18 job.xml
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc      6390 Oct  7 07:18 init_data.xml
[2025-10-07 11:15:03] -rw-r--r--. 2 boinc boinc 215214052 Oct  7 07:18 EVNT.46376901._003878.pool.root.1
[2025-10-07 11:15:03] -rw-r--r--. 2 boinc boinc     15120 Oct  7 07:18 start_atlas.sh
[2025-10-07 11:15:03] drwxrwx--x. 2 boinc boinc        68 Oct  7 07:18 shared
[2025-10-07 11:15:03] -rw-r--r--. 2 boinc boinc    565598 Oct  7 07:18 input.tar.gz
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc         0 Oct  7 07:18 boinc_lockfile
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc      2516 Oct  7 07:18 pandaJob.out
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc    974984 Oct  7 07:22 agis_schedconf.cvmfs.json
[2025-10-07 11:15:03] drwx------. 4 boinc boinc      4096 Oct  7 07:22 pilot3
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc 185381793 Oct  7 11:10 HITS.46376905._104720.pool.root.1
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc       531 Oct  7 11:11 boinc_task_state.xml
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc      1014 Oct  7 11:12 memory_monitor_summary.json
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc   1560401 Oct  7 11:12 agis_ddmendpoints.agis.ALL.json
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc    431419 Oct  7 11:12 log.46376905._104720.job.log.tgz.1
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc        95 Oct  7 11:13 pilot_heartbeat.json
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc      7780 Oct  7 11:13 heartbeat.json
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc      8192 Oct  7 11:14 boinc_mmap_file
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc        28 Oct  7 11:14 wrapper_checkpoint.txt
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc      4883 Oct  7 11:14 pilotlog.txt
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc   1846740 Oct  7 11:15 log.46376905._104720.job.log.1
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc       357 Oct  7 11:15 output.list
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc       620 Oct  7 11:15 runtime_log
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc   2293760 Oct  7 11:15 result.tar.gz
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc      8703 Oct  7 11:15 runtime_log.err
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc       656 Oct  7 11:15 d7CLDmPerP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbSIMDmkaO6Ym.diag
[2025-10-07 11:15:03] -rw-r--r--. 1 boinc boinc     20589 Oct  7 11:15 stderr.txt
[2025-10-07 11:15:03] HITS file was successfully produced:
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc 185381793 Oct  7 11:10 shared/HITS.pool.root.1
[2025-10-07 11:15:03]  *** Contents of shared directory: ***
[2025-10-07 11:15:03] total 394024
[2025-10-07 11:15:03] -rw-r--r--. 2 boinc boinc 215214052 Oct  7 07:18 ATLAS.root_0
[2025-10-07 11:15:03] -rw-r--r--. 2 boinc boinc     15120 Oct  7 07:18 start_atlas.sh
[2025-10-07 11:15:03] -rw-r--r--. 2 boinc boinc    565598 Oct  7 07:18 input.tar.gz
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc 185381793 Oct  7 11:10 HITS.pool.root.1
[2025-10-07 11:15:03] -rw-------. 1 boinc boinc   2293760 Oct  7 11:15 result.tar.gz
11:15:04 (5712): run_atlas exited; CPU time 50593.909495
11:15:04 (5712): called boinc_finish(0)

</stderr_txt>
]]>

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