Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:00:55 (29117): wrapper (7.7.26015): starting
07:00:55 (29117): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 07:00:55] Arguments: --nthreads 8
[2025-10-07 07:00:55] Threads: 8
[2025-10-07 07:00:55] Checking for CVMFS
[2025-10-07 07:00:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 07:00:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 07:00:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 07:00:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 07:00:57] 2.11.2.0 7099 10636 71720 151424 3 205 20613988 25165824 4364 130560 0 3405597 99.952 953039 1043 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 07:00:57] CVMFS is ok
[2025-10-07 07:00:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 07:00:57] Checking for apptainer binary...
[2025-10-07 07:00:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 07:00:57] Running /usr/bin/apptainer --version
[2025-10-07 07:00:58] apptainer version 1.3.2-1.el7
[2025-10-07 07:00:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 07:01:17] cg-vwn414.simple-grid.lan
[2025-10-07 07:01:17] apptainer works
[2025-10-07 07:01:17] Set ATHENA_PROC_NUMBER=8
[2025-10-07 07:01:17] Set ATHENA_CORE_NUMBER=8
[2025-10-07 07:01:17] Starting ATLAS job with PandaID=6832083854
[2025-10-07 07:01:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 11:04:42]  *** The last 200 lines of the pilot log: ***
[2025-10-07 11:04:42] 2025-10-07 09:03:40,321 | INFO     | sum of square deviations: 3675146117.0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,323 | INFO     | sum of deviations: 62284514637.0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,324 | INFO     | mean x: 1759820774.5
[2025-10-07 11:04:42] 2025-10-07 09:03:40,324 | INFO     | mean y: 2451534.6842105263
[2025-10-07 11:04:42] 2025-10-07 09:03:40,324 | INFO     | -- intersect: -29822099462.30188
[2025-10-07 11:04:42] 2025-10-07 09:03:40,324 | INFO     | intersect: -29822099462.30188
[2025-10-07 11:04:42] 2025-10-07 09:03:40,324 | INFO     | chi2: 6.623173887653354
[2025-10-07 11:04:42] 2025-10-07 09:03:40,325 | INFO     | sum of square deviations: 3438620752.0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,327 | INFO     | sum of deviations: 76123991263.00002
[2025-10-07 11:04:42] 2025-10-07 09:03:40,327 | INFO     | mean x: 1759820622.0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,327 | INFO     | mean y: 2460284.9103139015
[2025-10-07 11:04:42] 2025-10-07 09:03:40,327 | INFO     | -- intersect: -38956348875.90151
[2025-10-07 11:04:42] 2025-10-07 09:03:40,327 | INFO     | intersect: -38956348875.90151
[2025-10-07 11:04:42] 2025-10-07 09:03:40,328 | INFO     | chi2: 5.906575130477773
[2025-10-07 11:04:42] 2025-10-07 09:03:40,328 | INFO     | current chi2=5.906575130477773 (change=10.819567315172486 %)
[2025-10-07 11:04:42] 2025-10-07 09:03:40,328 | INFO     | right removable region: 222
[2025-10-07 11:04:42] 2025-10-07 09:03:40,328 | INFO     | sum of square deviations: 3438620752.0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,330 | INFO     | sum of deviations: -15122475229.999996
[2025-10-07 11:04:42] 2025-10-07 09:03:40,330 | INFO     | mean x: 1759820927.0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,330 | INFO     | mean y: 2501392.0358744394
[2025-10-07 11:04:42] 2025-10-07 09:03:40,331 | INFO     | -- intersect: 7741897591.024769
[2025-10-07 11:04:42] 2025-10-07 09:03:40,331 | INFO     | intersect: 7741897591.024769
[2025-10-07 11:04:42] 2025-10-07 09:03:40,337 | INFO     | chi2: 2.0231849921078737
[2025-10-07 11:04:42] 2025-10-07 09:03:40,338 | INFO     | current chi2=2.0231849921078737 (change=69.45293862993071 %)
[2025-10-07 11:04:42] 2025-10-07 09:03:40,338 | INFO     | sum of square deviations: 3212467674.5
[2025-10-07 11:04:42] 2025-10-07 09:03:40,340 | INFO     | sum of deviations: -49760181266.5
[2025-10-07 11:04:42] 2025-10-07 09:03:40,340 | INFO     | mean x: 1759821079.5
[2025-10-07 11:04:42] 2025-10-07 09:03:40,340 | INFO     | mean y: 2524609.857798165
[2025-10-07 11:04:42] 2025-10-07 09:03:40,340 | INFO     | -- intersect: 27261636540.426025
[2025-10-07 11:04:42] 2025-10-07 09:03:40,340 | INFO     | intersect: 27261636540.426025
[2025-10-07 11:04:42] 2025-10-07 09:03:40,340 | INFO     | chi2: 0.9077897072597417
[2025-10-07 11:04:42] 2025-10-07 09:03:40,341 | INFO     | current chi2=0.9077897072597417 (change=55.13066225773291 %)
[2025-10-07 11:04:42] 2025-10-07 09:03:40,341 | INFO     | sum of square deviations: 2996454322.0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,343 | INFO     | sum of deviations: -54082262791.999985
[2025-10-07 11:04:42] 2025-10-07 09:03:40,343 | INFO     | mean x: 1759821232.0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,343 | INFO     | mean y: 2527625.5492957747
[2025-10-07 11:04:42] 2025-10-07 09:03:40,343 | INFO     | -- intersect: 31765105695.63315
[2025-10-07 11:04:42] 2025-10-07 09:03:40,343 | INFO     | intersect: 31765105695.63315
[2025-10-07 11:04:42] 2025-10-07 09:03:40,344 | INFO     | chi2: 0.8594700729450947
[2025-10-07 11:04:42] 2025-10-07 09:03:40,344 | INFO     | current chi2=0.8594700729450947 (change=5.32277838449005 %)
[2025-10-07 11:04:42] 2025-10-07 09:03:40,344 | INFO     | left removable region: 30
[2025-10-07 11:04:42] 2025-10-07 09:03:40,344 | INFO     | sum of square deviations: 2194675568.0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,346 | INFO     | sum of deviations: -31089234013.99999
[2025-10-07 11:04:42] 2025-10-07 09:03:40,346 | INFO     | mean x: 1759821506.5
[2025-10-07 11:04:42] 2025-10-07 09:03:40,346 | INFO     | mean y: 2532889.1041666665
[2025-10-07 11:04:42] 2025-10-07 09:03:40,346 | INFO     | -- intersect: 24931731280.056732
[2025-10-07 11:04:42] 2025-10-07 09:03:40,346 | INFO     | intersect: 24931731280.056732
[2025-10-07 11:04:42] 2025-10-07 09:03:40,347 | INFO     | chi2: 0.06664481116759222
[2025-10-07 11:04:42] 2025-10-07 09:03:40,347 | INFO     | -- intersect: 24931731280.056732
[2025-10-07 11:04:42] 2025-10-07 09:03:40,347 | INFO     | current memory leak: -14.17 B/s (using 192 data points, chi2=0.07)
[2025-10-07 11:04:42] 2025-10-07 09:03:40,348 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-07 11:04:42] 2025-10-07 09:03:40,348 | INFO     | ..............................
[2025-10-07 11:04:42] 2025-10-07 09:03:40,348 | INFO     | . Timing measurements:
[2025-10-07 11:04:42] 2025-10-07 09:03:40,348 | INFO     | . get job = 0 s
[2025-10-07 11:04:42] 2025-10-07 09:03:40,348 | INFO     | . initial setup = 6 s
[2025-10-07 11:04:42] 2025-10-07 09:03:40,348 | INFO     | . payload setup = 119 s
[2025-10-07 11:04:42] 2025-10-07 09:03:40,348 | INFO     | . stage-in = 0 s
[2025-10-07 11:04:42] 2025-10-07 09:03:40,349 | INFO     | . payload execution = 14007 s
[2025-10-07 11:04:42] 2025-10-07 09:03:40,349 | INFO     | . stage-out = 5 s
[2025-10-07 11:04:42] 2025-10-07 09:03:40,349 | INFO     | . log creation = 1 s
[2025-10-07 11:04:42] 2025-10-07 09:03:40,349 | INFO     | ..............................
[2025-10-07 11:04:42] 2025-10-07 09:03:40,690 | INFO     | 
[2025-10-07 11:04:42] 2025-10-07 09:03:40,690 | INFO     | job summary report
[2025-10-07 11:04:42] 2025-10-07 09:03:40,690 | INFO     | --------------------------------------------------
[2025-10-07 11:04:42] 2025-10-07 09:03:40,690 | INFO     | PanDA job id: 6832083854
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | task id: 46376905
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | errors: (none)
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | pilot state: finished 
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | transexitcode: 0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | exeerrorcode: 0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | exeerrordiag: 
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | exitcode: 0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | exitmsg: OK
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | cpuconsumptiontime: 49274 s
[2025-10-07 11:04:42] 2025-10-07 09:03:40,691 | INFO     | nevents: 400
[2025-10-07 11:04:42] 2025-10-07 09:03:40,692 | INFO     | neventsw: 0
[2025-10-07 11:04:42] 2025-10-07 09:03:40,692 | INFO     | pid: 7087
[2025-10-07 11:04:42] 2025-10-07 09:03:40,692 | INFO     | pgrp: 7087
[2025-10-07 11:04:42] 2025-10-07 09:03:40,692 | INFO     | corecount: 8
[2025-10-07 11:04:42] 2025-10-07 09:03:40,692 | INFO     | event service: False
[2025-10-07 11:04:42] 2025-10-07 09:03:40,692 | INFO     | sizes: {0: 2347988, 1: 2348673, 2: 2348872, 13: 2348872, 24: 2348928, 34: 2348956, 45: 2349112, 56: 2349140, 67: 2349168, 78: 2349486, 88: 2349514, 14130: 2379892,
[2025-10-07 11:04:42] 2025-10-07 09:03:40,692 | INFO     | --------------------------------------------------
[2025-10-07 11:04:42] 2025-10-07 09:03:40,692 | INFO     | 
[2025-10-07 11:04:42] 2025-10-07 09:03:40,692 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-07 11:04:42] 2025-10-07 09:03:40,923 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,923 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,923 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,923 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,925 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 11:04:42] 2025-10-07 09:03:40,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,925 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 11:04:42] 2025-10-07 09:03:40,925 | INFO     | job 6832083854 has completed (purged errors)
[2025-10-07 11:04:42] 2025-10-07 09:03:40,925 | INFO     | overall cleanup function is called
[2025-10-07 11:04:42] 2025-10-07 09:03:41,933 | INFO     | --- collectZombieJob: --- 10, [7087]
[2025-10-07 11:04:42] 2025-10-07 09:03:41,933 | INFO     | zombie collector waiting for pid 7087
[2025-10-07 11:04:42] 2025-10-07 09:03:41,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 11:04:42] 2025-10-07 09:03:41,933 | INFO     | collected zombie processes
[2025-10-07 11:04:42] 2025-10-07 09:03:41,934 | INFO     | will attempt to kill all subprocesses of pid=7087
[2025-10-07 11:04:42] 2025-10-07 09:03:42,062 | INFO     | process IDs to be killed: [7087] (in reverse order)
[2025-10-07 11:04:42] 2025-10-07 09:03:42,653 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 11:04:42] 2025-10-07 09:03:42,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 11:04:42] 2025-10-07 09:03:42,663 | INFO     | did not find any defunct processes belonging to 7087
[2025-10-07 11:04:42] 2025-10-07 09:03:42,666 | INFO     | did not find any defunct processes belonging to 7087
[2025-10-07 11:04:42] 2025-10-07 09:03:42,667 | INFO     | ready for new job
[2025-10-07 11:04:42] 2025-10-07 09:03:42,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 11:04:42] 2025-10-07 09:03:42,669 | INFO     | ***************************************
[2025-10-07 11:04:42] 2025-10-07 09:03:42,669 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 11:04:42] 2025-10-07 09:03:42,670 | INFO     | ***************************************
[2025-10-07 11:04:42] 2025-10-07 09:03:42,670 | INFO     | 
[2025-10-07 11:04:42] 2025-10-07 09:03:42,670 | INFO     | pilot is running in a VM
[2025-10-07 11:04:42] 2025-10-07 09:03:42,670 | INFO     | architecture information:
[2025-10-07 11:04:42] 2025-10-07 09:03:42,682 | INFO     | executing command: cat /etc/os-release
[2025-10-07 11:04:42] 2025-10-07 09:03:42,976 | INFO     | cat /etc/os-release:
[2025-10-07 11:04:42] NAME="CentOS Linux"
[2025-10-07 11:04:42] VERSION="7 (Core)"
[2025-10-07 11:04:42] ID="centos"
[2025-10-07 11:04:42] ID_LIKE="rhel fedora"
[2025-10-07 11:04:42] VERSION_ID="7"
[2025-10-07 11:04:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 11:04:42] ANSI_COLOR="0;31"
[2025-10-07 11:04:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 11:04:42] HOME_URL="https://www.centos.org/"
[2025-10-07 11:04:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 11:04:42] 
[2025-10-07 11:04:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 11:04:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 11:04:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 11:04:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 11:04:42] 
[2025-10-07 11:04:42] 2025-10-07 09:03:42,976 | INFO     | ***************************************
[2025-10-07 11:04:42] 2025-10-07 09:03:43,480 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-07 11:04:42] 2025-10-07 09:03:43,620 | INFO     | sufficient remaining disk space (496273195008 B)
[2025-10-07 11:04:42] 2025-10-07 09:03:43,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 11:04:42] 2025-10-07 09:03:43,620 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 11:04:42] 2025-10-07 09:03:43,620 | INFO     | update_server=False
[2025-10-07 11:04:42] 2025-10-07 09:03:43,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 11:04:42] 2025-10-07 09:03:43,652 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 11:04:42] 2025-10-07 09:03:43,652 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 11:04:42] 2025-10-07 09:03:43,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:04:42] 2025-10-07 09:03:43,653 | INFO     | will abort loop
[2025-10-07 11:04:42] 2025-10-07 09:03:43,874 | INFO     | all job control threads have been joined
[2025-10-07 11:04:42] 2025-10-07 09:03:44,611 | INFO     | all data control threads have been joined
[2025-10-07 11:04:42] 2025-10-07 09:03:44,626 | INFO     | [job] retrieve thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:44,657 | INFO     | [job] job monitor thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:44,828 | INFO     | all payload control threads have been joined
[2025-10-07 11:04:42] 2025-10-07 09:03:44,880 | INFO     | [job] control thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:44,958 | INFO     | [payload] failed_post thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:45,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 11:04:42] 2025-10-07 09:03:45,052 | INFO     | [data] copytool_in thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:45,077 | INFO     | [job] validate thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:45,369 | INFO     | [payload] validate_post thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:45,374 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:45,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 11:04:42] 2025-10-07 09:03:45,560 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:45,617 | INFO     | [data] control thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:45,771 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:45,833 | INFO     | [payload] control thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:45,849 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:46,534 | INFO     | [job] queue monitor thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:46,740 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 11:04:42] 2025-10-07 09:03:47,019 | INFO     | [data] copytool_out thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:03:50,746 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 11:04:42] 2025-10-07 09:04:02,838 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-10-07 11:04:42] 2025-10-07 09:04:12,607 | INFO     | PID=473 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-07 11:04:42] 2025-10-07 09:04:12,607 | INFO     | .. there are 9 such processes running
[2025-10-07 11:04:42] 2025-10-07 09:04:12,608 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 11:04:42] 2025-10-07 09:04:12,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 11:04:42] 2025-10-07 09:04:12,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 11:04:42] 2025-10-07 09:04:31,691 | INFO     | [monitor] cgroup control has ended
[2025-10-07 11:04:42] 2025-10-07 09:04:32,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140387137124160)>', '<ExcThread(monitor, started 140386165057280)>']
[2025-10-07 11:04:42] 2025-10-07 09:04:32,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 11:04:42] 2025-10-07 09:04:32,730 | INFO     | [monitor] control thread has ended
[2025-10-07 11:04:42] 2025-10-07 09:04:37,552 | INFO     | all workflow threads have been joined
[2025-10-07 11:04:42] 2025-10-07 09:04:37,552 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 11:04:42] 2025-10-07 09:04:37,552 | INFO     | traces error code: 0
[2025-10-07 11:04:42] 2025-10-07 09:04:37,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 11:04:42] 2025-10-07 09:04:37,886 [wrapper] ==== pilot stdout END ====
[2025-10-07 11:04:42] 2025-10-07 09:04:37,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 11:04:42] 2025-10-07 09:04:38,009 [wrapper] pilotpid: 473
[2025-10-07 11:04:42] 2025-10-07 09:04:38,118 [wrapper] Pilot exit status: 0
[2025-10-07 11:04:42] 2025-10-07 09:04:38,408 [wrapper] pandaids: 6832083854
[2025-10-07 11:04:42] 2025-10-07 09:04:39,613 [wrapper] cleanup supervisor_pilot  1964 474
[2025-10-07 11:04:42] 2025-10-07 09:04:39,668 [wrapper] Test setup, not cleaning
[2025-10-07 11:04:42] 2025-10-07 09:04:39,776 [wrapper] apfmon messages muted
[2025-10-07 11:04:42] 2025-10-07 09:04:39,876 [wrapper] ==== wrapper stdout END ====
[2025-10-07 11:04:42] 2025-10-07 09:04:39,971 [wrapper] ==== wrapper stderr END ====
[2025-10-07 11:04:42]  *** Error codes and diagnostics ***
[2025-10-07 11:04:42]     "exeErrorCode": 0,
[2025-10-07 11:04:42]     "exeErrorDiag": "",
[2025-10-07 11:04:42]     "pilotErrorCode": 0,
[2025-10-07 11:04:42]     "pilotErrorDiag": "",
[2025-10-07 11:04:42]  *** Listing of results directory ***
[2025-10-07 11:04:42] total 394472
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc    552446 Oct  6 01:10 pilot3.tar.gz
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc      5112 Oct  6 01:21 queuedata.json
[2025-10-07 11:04:42] -rwx------. 1 boinc boinc     36292 Oct  6 01:22 runpilot2-wrapper.sh
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc       100 Oct  7 07:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 11:04:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 07:00 run_atlas
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc       105 Oct  7 07:00 job.xml
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc      6390 Oct  7 07:00 init_data.xml
[2025-10-07 11:04:42] -rw-r--r--. 2 boinc boinc 213040506 Oct  7 07:00 EVNT.46376901._003668.pool.root.1
[2025-10-07 11:04:42] -rw-r--r--. 2 boinc boinc     15120 Oct  7 07:00 start_atlas.sh
[2025-10-07 11:04:42] drwxrwx--x. 2 boinc boinc        68 Oct  7 07:00 shared
[2025-10-07 11:04:42] -rw-r--r--. 2 boinc boinc    565610 Oct  7 07:00 input.tar.gz
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc         0 Oct  7 07:00 boinc_lockfile
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc      2519 Oct  7 07:01 pandaJob.out
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc    974984 Oct  7 07:04 agis_schedconf.cvmfs.json
[2025-10-07 11:04:42] drwx------. 4 boinc boinc      4096 Oct  7 07:04 pilot3
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc 182271037 Oct  7 11:01 HITS.46376905._099284.pool.root.1
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc       531 Oct  7 11:01 boinc_task_state.xml
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc      1031 Oct  7 11:02 memory_monitor_summary.json
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc   1560401 Oct  7 11:02 agis_ddmendpoints.agis.ALL.json
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc    465337 Oct  7 11:02 log.46376905._099284.job.log.tgz.1
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc      7786 Oct  7 11:03 heartbeat.json
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc        95 Oct  7 11:04 pilot_heartbeat.json
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc        28 Oct  7 11:04 wrapper_checkpoint.txt
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc      8192 Oct  7 11:04 boinc_mmap_file
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc      5068 Oct  7 11:04 pilotlog.txt
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc   1914594 Oct  7 11:04 log.46376905._099284.job.log.1
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc       357 Oct  7 11:04 output.list
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc       620 Oct  7 11:04 runtime_log
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc   2396160 Oct  7 11:04 result.tar.gz
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc       657 Oct  7 11:04 XWXKDm3EnP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZtHMDmlmVaIo.diag
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc      8703 Oct  7 11:04 runtime_log.err
[2025-10-07 11:04:42] -rw-r--r--. 1 boinc boinc     20640 Oct  7 11:04 stderr.txt
[2025-10-07 11:04:42] HITS file was successfully produced:
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc 182271037 Oct  7 11:01 shared/HITS.pool.root.1
[2025-10-07 11:04:42]  *** Contents of shared directory: ***
[2025-10-07 11:04:42] total 388960
[2025-10-07 11:04:42] -rw-r--r--. 2 boinc boinc 213040506 Oct  7 07:00 ATLAS.root_0
[2025-10-07 11:04:42] -rw-r--r--. 2 boinc boinc     15120 Oct  7 07:00 start_atlas.sh
[2025-10-07 11:04:42] -rw-r--r--. 2 boinc boinc    565610 Oct  7 07:00 input.tar.gz
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc 182271037 Oct  7 11:01 HITS.pool.root.1
[2025-10-07 11:04:42] -rw-------. 1 boinc boinc   2396160 Oct  7 11:04 result.tar.gz
11:04:44 (29117): run_atlas exited; CPU time 49472.963890
11:04:44 (29117): called boinc_finish(0)

</stderr_txt>
]]>

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