Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:35:38 (4208): wrapper (7.7.26015): starting
06:35:38 (4208): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 06:35:39] Arguments: --nthreads 8
[2025-10-07 06:35:39] Threads: 8
[2025-10-07 06:35:39] Checking for CVMFS
[2025-10-07 06:35:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 06:35:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 06:35:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 06:35:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 06:35:41] 2.11.2.0 32577 212917 142288 151424 3 60 16558587 25165824 4632 130560 0 104162274 99.855 69824464 3363 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 06:35:41] CVMFS is ok
[2025-10-07 06:35:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 06:35:41] Checking for apptainer binary...
[2025-10-07 06:35:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 06:35:41] Running /usr/bin/apptainer --version
[2025-10-07 06:35:41] apptainer version 1.3.2-1.el7
[2025-10-07 06:35:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 06:36:09] cg-vwn389.simple-grid.lan
[2025-10-07 06:36:09] apptainer works
[2025-10-07 06:36:09] Set ATHENA_PROC_NUMBER=8
[2025-10-07 06:36:09] Set ATHENA_CORE_NUMBER=8
[2025-10-07 06:36:10] Starting ATLAS job with PandaID=6832321804
[2025-10-07 06:36:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 10:41:04]  *** The last 200 lines of the pilot log: ***
[2025-10-07 10:41:04] 2025-10-07 08:40:02,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 10:41:04] 2025-10-07 08:40:02,383 | INFO     | fitting pss+swap vs Time
[2025-10-07 10:41:04] 2025-10-07 08:40:02,384 | INFO     | sum of square deviations: 3723716330.0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,386 | INFO     | sum of deviations: 79936730687.99998
[2025-10-07 10:41:04] 2025-10-07 08:40:02,386 | INFO     | mean x: 1759819340.0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,386 | INFO     | mean y: 2421936.9126637555
[2025-10-07 10:41:04] 2025-10-07 08:40:02,386 | INFO     | -- intersect: -37775483836.35387
[2025-10-07 10:41:04] 2025-10-07 08:40:02,386 | INFO     | intersect: -37775483836.35387
[2025-10-07 10:41:04] 2025-10-07 08:40:02,387 | INFO     | chi2: 6.786251679316667
[2025-10-07 10:41:04] 2025-10-07 08:40:02,387 | INFO     | sum of square deviations: 3485088600.0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,389 | INFO     | sum of deviations: 92950641823.5
[2025-10-07 10:41:04] 2025-10-07 08:40:02,389 | INFO     | mean x: 1759819187.5
[2025-10-07 10:41:04] 2025-10-07 08:40:02,389 | INFO     | mean y: 2430083.2991071427
[2025-10-07 10:41:04] 2025-10-07 08:40:02,389 | INFO     | -- intersect: -46933628578.57689
[2025-10-07 10:41:04] 2025-10-07 08:40:02,389 | INFO     | intersect: -46933628578.57689
[2025-10-07 10:41:04] 2025-10-07 08:40:02,390 | INFO     | chi2: 6.07516086901547
[2025-10-07 10:41:04] 2025-10-07 08:40:02,390 | INFO     | current chi2=6.07516086901547 (change=10.47840315838094 %)
[2025-10-07 10:41:04] 2025-10-07 08:40:02,390 | INFO     | right removable region: 223
[2025-10-07 10:41:04] 2025-10-07 08:40:02,390 | INFO     | sum of square deviations: 3485088600.0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,392 | INFO     | sum of deviations: 3440016309.999998
[2025-10-07 10:41:04] 2025-10-07 08:40:02,392 | INFO     | mean x: 1759819492.5
[2025-10-07 10:41:04] 2025-10-07 08:40:02,392 | INFO     | mean y: 2470779.035714286
[2025-10-07 10:41:04] 2025-10-07 08:40:02,392 | INFO     | -- intersect: -1734589150.1884434
[2025-10-07 10:41:04] 2025-10-07 08:40:02,393 | INFO     | intersect: -1734589150.1884434
[2025-10-07 10:41:04] 2025-10-07 08:40:02,393 | INFO     | chi2: 2.2149381797704977
[2025-10-07 10:41:04] 2025-10-07 08:40:02,393 | INFO     | current chi2=2.2149381797704977 (change=67.36139058147151 %)
[2025-10-07 10:41:04] 2025-10-07 08:40:02,394 | INFO     | sum of square deviations: 3256879670.0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,395 | INFO     | sum of deviations: -33190092253.000008
[2025-10-07 10:41:04] 2025-10-07 08:40:02,396 | INFO     | mean x: 1759819645.0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,396 | INFO     | mean y: 2495089.7625570777
[2025-10-07 10:41:04] 2025-10-07 08:40:02,396 | INFO     | -- intersect: 17936401860.77683
[2025-10-07 10:41:04] 2025-10-07 08:40:02,396 | INFO     | intersect: 17936401860.77683
[2025-10-07 10:41:04] 2025-10-07 08:40:02,396 | INFO     | chi2: 0.9315505686107364
[2025-10-07 10:41:04] 2025-10-07 08:40:02,396 | INFO     | current chi2=0.9315505686107364 (change=57.94236709995854 %)
[2025-10-07 10:41:04] 2025-10-07 08:40:02,397 | INFO     | sum of square deviations: 3038856977.5
[2025-10-07 10:41:04] 2025-10-07 08:40:02,398 | INFO     | sum of deviations: -30432585026.5
[2025-10-07 10:41:04] 2025-10-07 08:40:02,399 | INFO     | mean x: 1759819797.5
[2025-10-07 10:41:04] 2025-10-07 08:40:02,399 | INFO     | mean y: 2493124.2943925234
[2025-10-07 10:41:04] 2025-10-07 08:40:02,399 | INFO     | -- intersect: 17626180588.12363
[2025-10-07 10:41:04] 2025-10-07 08:40:02,399 | INFO     | intersect: 17626180588.12363
[2025-10-07 10:41:04] 2025-10-07 08:40:02,399 | INFO     | chi2: 0.9169102959605497
[2025-10-07 10:41:04] 2025-10-07 08:40:02,399 | INFO     | current chi2=0.9169102959605497 (change=1.5716025671070482 %)
[2025-10-07 10:41:04] 2025-10-07 08:40:02,399 | INFO     | left removable region: 30
[2025-10-07 10:41:04] 2025-10-07 08:40:02,400 | INFO     | sum of square deviations: 2229146912.0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,401 | INFO     | sum of deviations: 5344436981.0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,401 | INFO     | mean x: 1759820072.0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,401 | INFO     | mean y: 2486307.067357513
[2025-10-07 10:41:04] 2025-10-07 08:40:02,402 | INFO     | -- intersect: -4216727519.5639496
[2025-10-07 10:41:04] 2025-10-07 08:40:02,402 | INFO     | intersect: -4216727519.5639496
[2025-10-07 10:41:04] 2025-10-07 08:40:02,402 | INFO     | chi2: 0.0003111604021710291
[2025-10-07 10:41:04] 2025-10-07 08:40:02,402 | INFO     | -- intersect: -4216727519.5639496
[2025-10-07 10:41:04] 2025-10-07 08:40:02,402 | INFO     | current memory leak: 2.40 B/s (using 193 data points, chi2=0.00)
[2025-10-07 10:41:04] 2025-10-07 08:40:02,403 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-07 10:41:04] 2025-10-07 08:40:02,403 | INFO     | ..............................
[2025-10-07 10:41:04] 2025-10-07 08:40:02,403 | INFO     | . Timing measurements:
[2025-10-07 10:41:04] 2025-10-07 08:40:02,403 | INFO     | . get job = 0 s
[2025-10-07 10:41:04] 2025-10-07 08:40:02,403 | INFO     | . initial setup = 6 s
[2025-10-07 10:41:04] 2025-10-07 08:40:02,404 | INFO     | . payload setup = 114 s
[2025-10-07 10:41:04] 2025-10-07 08:40:02,404 | INFO     | . stage-in = 0 s
[2025-10-07 10:41:04] 2025-10-07 08:40:02,404 | INFO     | . payload execution = 14081 s
[2025-10-07 10:41:04] 2025-10-07 08:40:02,404 | INFO     | . stage-out = 2 s
[2025-10-07 10:41:04] 2025-10-07 08:40:02,409 | INFO     | . log creation = 0 s
[2025-10-07 10:41:04] 2025-10-07 08:40:02,409 | INFO     | ..............................
[2025-10-07 10:41:04] 2025-10-07 08:40:02,564 | INFO     | time since job start (14431s) is within the limit (172800.0s)
[2025-10-07 10:41:04] 2025-10-07 08:40:02,582 | INFO     | 
[2025-10-07 10:41:04] 2025-10-07 08:40:02,582 | INFO     | job summary report
[2025-10-07 10:41:04] 2025-10-07 08:40:02,582 | INFO     | --------------------------------------------------
[2025-10-07 10:41:04] 2025-10-07 08:40:02,582 | INFO     | PanDA job id: 6832321804
[2025-10-07 10:41:04] 2025-10-07 08:40:02,583 | INFO     | task id: 46376905
[2025-10-07 10:41:04] 2025-10-07 08:40:02,583 | INFO     | errors: (none)
[2025-10-07 10:41:04] 2025-10-07 08:40:02,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 10:41:04] 2025-10-07 08:40:02,583 | INFO     | pilot state: finished 
[2025-10-07 10:41:04] 2025-10-07 08:40:02,583 | INFO     | transexitcode: 0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,583 | INFO     | exeerrorcode: 0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,583 | INFO     | exeerrordiag: 
[2025-10-07 10:41:04] 2025-10-07 08:40:02,584 | INFO     | exitcode: 0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,584 | INFO     | exitmsg: OK
[2025-10-07 10:41:04] 2025-10-07 08:40:02,584 | INFO     | cpuconsumptiontime: 49762 s
[2025-10-07 10:41:04] 2025-10-07 08:40:02,584 | INFO     | nevents: 400
[2025-10-07 10:41:04] 2025-10-07 08:40:02,584 | INFO     | neventsw: 0
[2025-10-07 10:41:04] 2025-10-07 08:40:02,584 | INFO     | pid: 14557
[2025-10-07 10:41:04] 2025-10-07 08:40:02,584 | INFO     | pgrp: 14557
[2025-10-07 10:41:04] 2025-10-07 08:40:02,584 | INFO     | corecount: 8
[2025-10-07 10:41:04] 2025-10-07 08:40:02,584 | INFO     | event service: False
[2025-10-07 10:41:04] 2025-10-07 08:40:02,585 | INFO     | sizes: {0: 2348646, 1: 2348845, 12: 2348845, 23: 2348873, 34: 2348901, 44: 2348929, 55: 2349085, 66: 2349113, 76: 2349141, 79: 2349459, 87: 2349515, 14200: 2379875
[2025-10-07 10:41:04] 2025-10-07 08:40:02,585 | INFO     | --------------------------------------------------
[2025-10-07 10:41:04] 2025-10-07 08:40:02,585 | INFO     | 
[2025-10-07 10:41:04] 2025-10-07 08:40:02,585 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-10-07 10:41:04] 2025-10-07 08:40:02,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,721 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,721 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,721 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,722 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 10:41:04] 2025-10-07 08:40:02,723 | INFO     | job 6832321804 has completed (purged errors)
[2025-10-07 10:41:04] 2025-10-07 08:40:02,723 | INFO     | overall cleanup function is called
[2025-10-07 10:41:04] 2025-10-07 08:40:03,732 | INFO     | --- collectZombieJob: --- 10, [14557]
[2025-10-07 10:41:04] 2025-10-07 08:40:03,732 | INFO     | zombie collector waiting for pid 14557
[2025-10-07 10:41:04] 2025-10-07 08:40:03,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 10:41:04] 2025-10-07 08:40:03,732 | INFO     | collected zombie processes
[2025-10-07 10:41:04] 2025-10-07 08:40:03,732 | INFO     | will attempt to kill all subprocesses of pid=14557
[2025-10-07 10:41:04] 2025-10-07 08:40:03,847 | INFO     | process IDs to be killed: [14557] (in reverse order)
[2025-10-07 10:41:04] 2025-10-07 08:40:04,343 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 10:41:04] 2025-10-07 08:40:04,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 10:41:04] 2025-10-07 08:40:04,346 | INFO     | did not find any defunct processes belonging to 14557
[2025-10-07 10:41:04] 2025-10-07 08:40:04,361 | INFO     | did not find any defunct processes belonging to 14557
[2025-10-07 10:41:04] 2025-10-07 08:40:04,362 | INFO     | ready for new job
[2025-10-07 10:41:04] 2025-10-07 08:40:04,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 10:41:04] 2025-10-07 08:40:04,364 | INFO     | ***************************************
[2025-10-07 10:41:04] 2025-10-07 08:40:04,364 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 10:41:04] 2025-10-07 08:40:04,365 | INFO     | ***************************************
[2025-10-07 10:41:04] 2025-10-07 08:40:04,365 | INFO     | 
[2025-10-07 10:41:04] 2025-10-07 08:40:04,365 | INFO     | pilot is running in a VM
[2025-10-07 10:41:04] 2025-10-07 08:40:04,365 | INFO     | architecture information:
[2025-10-07 10:41:04] 2025-10-07 08:40:04,372 | INFO     | executing command: cat /etc/os-release
[2025-10-07 10:41:04] 2025-10-07 08:40:04,448 | INFO     | cat /etc/os-release:
[2025-10-07 10:41:04] NAME="CentOS Linux"
[2025-10-07 10:41:04] VERSION="7 (Core)"
[2025-10-07 10:41:04] ID="centos"
[2025-10-07 10:41:04] ID_LIKE="rhel fedora"
[2025-10-07 10:41:04] VERSION_ID="7"
[2025-10-07 10:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 10:41:04] ANSI_COLOR="0;31"
[2025-10-07 10:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 10:41:04] HOME_URL="https://www.centos.org/"
[2025-10-07 10:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 10:41:04] 
[2025-10-07 10:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 10:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 10:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 10:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 10:41:04] 
[2025-10-07 10:41:04] 2025-10-07 08:40:04,448 | INFO     | ***************************************
[2025-10-07 10:41:04] 2025-10-07 08:40:04,950 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-10-07 10:41:04] 2025-10-07 08:40:05,197 | INFO     | sufficient remaining disk space (496354983936 B)
[2025-10-07 10:41:04] 2025-10-07 08:40:05,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 10:41:04] 2025-10-07 08:40:05,198 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 10:41:04] 2025-10-07 08:40:05,198 | INFO     | update_server=False
[2025-10-07 10:41:04] 2025-10-07 08:40:05,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 10:41:04] 2025-10-07 08:40:05,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 10:41:04] 2025-10-07 08:40:05,945 | INFO     | all data control threads have been joined
[2025-10-07 10:41:04] 2025-10-07 08:40:06,159 | INFO     | all job control threads have been joined
[2025-10-07 10:41:04] 2025-10-07 08:40:06,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 10:41:04] 2025-10-07 08:40:06,186 | INFO     | aborting loop
[2025-10-07 10:41:04] 2025-10-07 08:40:06,203 | INFO     | [job] retrieve thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:06,295 | INFO     | all payload control threads have been joined
[2025-10-07 10:41:04] 2025-10-07 08:40:06,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 10:41:04] 2025-10-07 08:40:06,414 | INFO     | [data] copytool_in thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:06,497 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:06,556 | INFO     | [job] validate thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:06,666 | INFO     | [payload] validate_post thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:06,940 | INFO     | [payload] failed_post thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:06,951 | INFO     | [data] control thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:07,164 | INFO     | [job] control thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:07,191 | INFO     | [job] job monitor thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:07,301 | INFO     | [payload] control thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:07,479 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:07,498 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:07,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 10:41:04] 2025-10-07 08:40:07,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:08,348 | INFO     | [data] copytool_out thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:08,591 | INFO     | [job] queue monitor thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:09,213 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 10:41:04] 2025-10-07 08:40:35,826 | INFO     | PID=7971 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-07 10:41:04] 2025-10-07 08:40:35,826 | INFO     | .. there are 9 such processes running
[2025-10-07 10:41:04] 2025-10-07 08:40:35,827 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 10:41:04] 2025-10-07 08:40:35,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 10:41:04] 2025-10-07 08:40:35,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 10:41:04] 2025-10-07 08:40:55,905 | INFO     | [monitor] cgroup control has ended
[2025-10-07 10:41:04] 2025-10-07 08:40:56,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256558085952)>', '<ExcThread(monitor, started 140255822857984)>']
[2025-10-07 10:41:04] 2025-10-07 08:40:57,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 10:41:04] 2025-10-07 08:40:57,949 | INFO     | [monitor] control thread has ended
[2025-10-07 10:41:04] 2025-10-07 08:41:01,997 | INFO     | all workflow threads have been joined
[2025-10-07 10:41:04] 2025-10-07 08:41:01,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 10:41:04] 2025-10-07 08:41:01,997 | INFO     | traces error code: 0
[2025-10-07 10:41:04] 2025-10-07 08:41:01,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 10:41:04] 2025-10-07 08:41:02,263 [wrapper] ==== pilot stdout END ====
[2025-10-07 10:41:04] 2025-10-07 08:41:02,369 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 10:41:04] 2025-10-07 08:41:02,418 [wrapper] pilotpid: 7971
[2025-10-07 10:41:04] 2025-10-07 08:41:02,454 [wrapper] Pilot exit status: 0
[2025-10-07 10:41:04] 2025-10-07 08:41:02,750 [wrapper] pandaids: 6832321804
[2025-10-07 10:41:04] 2025-10-07 08:41:03,331 [wrapper] cleanup supervisor_pilot 29645 7972
[2025-10-07 10:41:04] 2025-10-07 08:41:03,356 [wrapper] Test setup, not cleaning
[2025-10-07 10:41:04] 2025-10-07 08:41:03,379 [wrapper] apfmon messages muted
[2025-10-07 10:41:04] 2025-10-07 08:41:03,408 [wrapper] ==== wrapper stdout END ====
[2025-10-07 10:41:04] 2025-10-07 08:41:03,425 [wrapper] ==== wrapper stderr END ====
[2025-10-07 10:41:04]  *** Error codes and diagnostics ***
[2025-10-07 10:41:04]     "exeErrorCode": 0,
[2025-10-07 10:41:04]     "exeErrorDiag": "",
[2025-10-07 10:41:04]     "pilotErrorCode": 0,
[2025-10-07 10:41:04]     "pilotErrorDiag": "",
[2025-10-07 10:41:04]  *** Listing of results directory ***
[2025-10-07 10:41:04] total 401704
[2025-10-07 10:41:04] -rwx------. 1 boinc boinc     36292 Oct  6 05:29 runpilot2-wrapper.sh
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc    552446 Oct  6 05:29 pilot3.tar.gz
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc      5112 Oct  6 05:29 queuedata.json
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc       100 Oct  7 06:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 10:41:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 06:35 run_atlas
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc       105 Oct  7 06:35 job.xml
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc      6390 Oct  7 06:35 init_data.xml
[2025-10-07 10:41:04] -rw-r--r--. 2 boinc boinc 217055214 Oct  7 06:35 EVNT.46376901._003856.pool.root.1
[2025-10-07 10:41:04] -rw-r--r--. 2 boinc boinc     15120 Oct  7 06:35 start_atlas.sh
[2025-10-07 10:41:04] drwxrwx--x. 2 boinc boinc        68 Oct  7 06:35 shared
[2025-10-07 10:41:04] -rw-r--r--. 2 boinc boinc    565598 Oct  7 06:35 input.tar.gz
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc         0 Oct  7 06:35 boinc_lockfile
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc      2519 Oct  7 06:36 pandaJob.out
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc    974984 Oct  7 06:39 agis_schedconf.cvmfs.json
[2025-10-07 10:41:04] drwx------. 4 boinc boinc      4096 Oct  7 06:39 pilot3
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc 185683509 Oct  7 10:37 HITS.46376905._104174.pool.root.1
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc       531 Oct  7 10:38 boinc_task_state.xml
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc      1017 Oct  7 10:38 memory_monitor_summary.json
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc   1560401 Oct  7 10:38 agis_ddmendpoints.agis.ALL.json
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc    446007 Oct  7 10:38 log.46376905._104174.job.log.tgz.1
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc      7777 Oct  7 10:40 heartbeat.json
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc      8192 Oct  7 10:40 boinc_mmap_file
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc        28 Oct  7 10:40 wrapper_checkpoint.txt
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc        95 Oct  7 10:40 pilot_heartbeat.json
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc      4884 Oct  7 10:41 pilotlog.txt
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc   1922107 Oct  7 10:41 log.46376905._104174.job.log.1
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc       357 Oct  7 10:41 output.list
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc       620 Oct  7 10:41 runtime_log
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc   2385920 Oct  7 10:41 result.tar.gz
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc       656 Oct  7 10:41 YLtKDmi5qP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTPSNDmPpLzGm.diag
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc      8717 Oct  7 10:41 runtime_log.err
[2025-10-07 10:41:04] -rw-r--r--. 1 boinc boinc     20627 Oct  7 10:41 stderr.txt
[2025-10-07 10:41:04] HITS file was successfully produced:
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc 185683509 Oct  7 10:37 shared/HITS.pool.root.1
[2025-10-07 10:41:04]  *** Contents of shared directory: ***
[2025-10-07 10:41:04] total 396204
[2025-10-07 10:41:04] -rw-r--r--. 2 boinc boinc 217055214 Oct  7 06:35 ATLAS.root_0
[2025-10-07 10:41:04] -rw-r--r--. 2 boinc boinc     15120 Oct  7 06:35 start_atlas.sh
[2025-10-07 10:41:04] -rw-r--r--. 2 boinc boinc    565598 Oct  7 06:35 input.tar.gz
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc 185683509 Oct  7 10:37 HITS.pool.root.1
[2025-10-07 10:41:04] -rw-------. 1 boinc boinc   2385920 Oct  7 10:41 result.tar.gz
10:41:05 (4208): run_atlas exited; CPU time 49968.006178
10:41:05 (4208): called boinc_finish(0)

</stderr_txt>
]]>

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