Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:03:07 (23773): wrapper (7.7.26015): starting
06:03:07 (23773): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 06:03:07] Arguments: --nthreads 8
[2025-10-07 06:03:07] Threads: 8
[2025-10-07 06:03:07] Checking for CVMFS
[2025-10-07 06:03:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 06:03:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 06:03:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 06:03:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 06:03:08] 2.11.2.0 11231 212822 138752 151422 2 205 23463872 25165824 4531 130560 0 113621240 99.883 62022011 4218 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-07 06:03:08] CVMFS is ok
[2025-10-07 06:03:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 06:03:08] Checking for apptainer binary...
[2025-10-07 06:03:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 06:03:08] Running /usr/bin/apptainer --version
[2025-10-07 06:03:08] apptainer version 1.3.2-1.el7
[2025-10-07 06:03:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 06:03:22] cg-vwn244.simple-grid.lan
[2025-10-07 06:03:22] apptainer works
[2025-10-07 06:03:22] Set ATHENA_PROC_NUMBER=8
[2025-10-07 06:03:22] Set ATHENA_CORE_NUMBER=8
[2025-10-07 06:03:22] Starting ATLAS job with PandaID=6832257756
[2025-10-07 06:03:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 09:40:26]  *** The last 200 lines of the pilot log: ***
[2025-10-07 09:40:26] 2025-10-07 07:39:50,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 09:40:26] 2025-10-07 07:39:50,704 | INFO     | fitting pss+swap vs Time
[2025-10-07 09:40:26] 2025-10-07 07:39:50,704 | INFO     | sum of square deviations: 2632440055.0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,706 | INFO     | sum of deviations: 23312082385.000008
[2025-10-07 09:40:26] 2025-10-07 07:39:50,706 | INFO     | mean x: 1759816487.5
[2025-10-07 09:40:26] 2025-10-07 07:39:50,706 | INFO     | mean y: 2479380.9215686275
[2025-10-07 09:40:26] 2025-10-07 07:39:50,706 | INFO     | -- intersect: -15581916116.008877
[2025-10-07 09:40:26] 2025-10-07 07:39:50,706 | INFO     | intersect: -15581916116.008877
[2025-10-07 09:40:26] 2025-10-07 07:39:50,706 | INFO     | chi2: 6.1922362236631825
[2025-10-07 09:40:26] 2025-10-07 07:39:50,707 | INFO     | sum of square deviations: 2443580700.0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,708 | INFO     | sum of deviations: 36640772704.99999
[2025-10-07 09:40:26] 2025-10-07 07:39:50,708 | INFO     | mean x: 1759816335.0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,708 | INFO     | mean y: 2489927.7587939696
[2025-10-07 09:40:26] 2025-10-07 07:39:50,708 | INFO     | -- intersect: -26385437564.581085
[2025-10-07 09:40:26] 2025-10-07 07:39:50,708 | INFO     | intersect: -26385437564.581085
[2025-10-07 09:40:26] 2025-10-07 07:39:50,709 | INFO     | chi2: 5.482537251294896
[2025-10-07 09:40:26] 2025-10-07 07:39:50,709 | INFO     | current chi2=5.482537251294896 (change=11.461109472151975 %)
[2025-10-07 09:40:26] 2025-10-07 07:39:50,709 | INFO     | right removable region: 198
[2025-10-07 09:40:26] 2025-10-07 07:39:50,709 | INFO     | sum of square deviations: 2443580700.0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,711 | INFO     | sum of deviations: -45175063897.99999
[2025-10-07 09:40:26] 2025-10-07 07:39:50,711 | INFO     | mean x: 1759816640.0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,711 | INFO     | mean y: 2534612.1708542714
[2025-10-07 09:40:26] 2025-10-07 07:39:50,711 | INFO     | -- intersect: 32536687939.197723
[2025-10-07 09:40:26] 2025-10-07 07:39:50,711 | INFO     | intersect: 32536687939.197723
[2025-10-07 09:40:26] 2025-10-07 07:39:50,711 | INFO     | chi2: 1.744793627554737
[2025-10-07 09:40:26] 2025-10-07 07:39:50,711 | INFO     | current chi2=1.744793627554737 (change=71.8228832923535 %)
[2025-10-07 09:40:26] 2025-10-07 07:39:50,712 | INFO     | sum of square deviations: 2263977332.5
[2025-10-07 09:40:26] 2025-10-07 07:39:50,713 | INFO     | sum of deviations: -67706810950.5
[2025-10-07 09:40:26] 2025-10-07 07:39:50,713 | INFO     | mean x: 1759816792.5
[2025-10-07 09:40:26] 2025-10-07 07:39:50,713 | INFO     | mean y: 2553556.5515463916
[2025-10-07 09:40:26] 2025-10-07 07:39:50,713 | INFO     | -- intersect: 52631871512.54869
[2025-10-07 09:40:26] 2025-10-07 07:39:50,713 | INFO     | intersect: 52631871512.54869
[2025-10-07 09:40:26] 2025-10-07 07:39:50,714 | INFO     | chi2: 0.9973606510823967
[2025-10-07 09:40:26] 2025-10-07 07:39:50,714 | INFO     | current chi2=0.9973606510823967 (change=42.8379015528524 %)
[2025-10-07 09:40:26] 2025-10-07 07:39:50,714 | INFO     | sum of square deviations: 2093397390.0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,720 | INFO     | sum of deviations: -65037728774.999985
[2025-10-07 09:40:26] 2025-10-07 07:39:50,721 | INFO     | mean x: 1759816945.0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,721 | INFO     | mean y: 2551134.888888889
[2025-10-07 09:40:26] 2025-10-07 07:39:50,721 | INFO     | -- intersect: 54676593296.83075
[2025-10-07 09:40:26] 2025-10-07 07:39:50,721 | INFO     | intersect: 54676593296.83075
[2025-10-07 09:40:26] 2025-10-07 07:39:50,721 | INFO     | chi2: 0.9860507048077983
[2025-10-07 09:40:26] 2025-10-07 07:39:50,721 | INFO     | current chi2=0.9860507048077983 (change=1.1339876164478833 %)
[2025-10-07 09:40:26] 2025-10-07 07:39:50,721 | INFO     | left removable region: 30
[2025-10-07 09:40:26] 2025-10-07 07:39:50,722 | INFO     | sum of square deviations: 1470248962.0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,723 | INFO     | sum of deviations: -34894114321.0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,723 | INFO     | mean x: 1759817219.5
[2025-10-07 09:40:26] 2025-10-07 07:39:50,723 | INFO     | mean y: 2548413.404761905
[2025-10-07 09:40:26] 2025-10-07 07:39:50,723 | INFO     | -- intersect: 41769123210.20938
[2025-10-07 09:40:26] 2025-10-07 07:39:50,723 | INFO     | intersect: 41769123210.20938
[2025-10-07 09:40:26] 2025-10-07 07:39:50,723 | INFO     | chi2: 0.1826467789494776
[2025-10-07 09:40:26] 2025-10-07 07:39:50,723 | INFO     | -- intersect: 41769123210.20938
[2025-10-07 09:40:26] 2025-10-07 07:39:50,723 | INFO     | current memory leak: -23.73 B/s (using 168 data points, chi2=0.18)
[2025-10-07 09:40:26] 2025-10-07 07:39:50,724 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-07 09:40:26] 2025-10-07 07:39:50,724 | INFO     | ..............................
[2025-10-07 09:40:26] 2025-10-07 07:39:50,724 | INFO     | . Timing measurements:
[2025-10-07 09:40:26] 2025-10-07 07:39:50,724 | INFO     | . get job = 0 s
[2025-10-07 09:40:26] 2025-10-07 07:39:50,724 | INFO     | . initial setup = 6 s
[2025-10-07 09:40:26] 2025-10-07 07:39:50,724 | INFO     | . payload setup = 89 s
[2025-10-07 09:40:26] 2025-10-07 07:39:50,725 | INFO     | . stage-in = 0 s
[2025-10-07 09:40:26] 2025-10-07 07:39:50,725 | INFO     | . payload execution = 12526 s
[2025-10-07 09:40:26] 2025-10-07 07:39:50,725 | INFO     | . stage-out = 2 s
[2025-10-07 09:40:26] 2025-10-07 07:39:50,725 | INFO     | . log creation = 0 s
[2025-10-07 09:40:26] 2025-10-07 07:39:50,725 | INFO     | ..............................
[2025-10-07 09:40:26] 2025-10-07 07:39:50,845 | INFO     | 
[2025-10-07 09:40:26] 2025-10-07 07:39:50,845 | INFO     | job summary report
[2025-10-07 09:40:26] 2025-10-07 07:39:50,845 | INFO     | --------------------------------------------------
[2025-10-07 09:40:26] 2025-10-07 07:39:50,845 | INFO     | PanDA job id: 6832257756
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | task id: 46376905
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | errors: (none)
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | pilot state: finished 
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | transexitcode: 0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | exeerrorcode: 0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | exeerrordiag: 
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | exitcode: 0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | exitmsg: OK
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | cpuconsumptiontime: 45200 s
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | nevents: 400
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | neventsw: 0
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | pid: 9242
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | pgrp: 9242
[2025-10-07 09:40:26] 2025-10-07 07:39:50,846 | INFO     | corecount: 8
[2025-10-07 09:40:26] 2025-10-07 07:39:50,847 | INFO     | event service: False
[2025-10-07 09:40:26] 2025-10-07 07:39:50,847 | INFO     | sizes: {0: 2348646, 1: 2348845, 12: 2348845, 23: 2348873, 34: 2348901, 44: 2348929, 55: 2349085, 60: 2349375, 66: 2349403, 12620: 2378698, 12623: 2387698, 12625: 2
[2025-10-07 09:40:26] 2025-10-07 07:39:50,847 | INFO     | --------------------------------------------------
[2025-10-07 09:40:26] 2025-10-07 07:39:50,847 | INFO     | 
[2025-10-07 09:40:26] 2025-10-07 07:39:50,847 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-07 09:40:26] 2025-10-07 07:39:51,133 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,133 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,133 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,134 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,135 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 09:40:26] 2025-10-07 07:39:51,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,135 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 09:40:26] 2025-10-07 07:39:51,135 | INFO     | job 6832257756 has completed (purged errors)
[2025-10-07 09:40:26] 2025-10-07 07:39:51,136 | INFO     | overall cleanup function is called
[2025-10-07 09:40:26] 2025-10-07 07:39:52,144 | INFO     | --- collectZombieJob: --- 10, [9242]
[2025-10-07 09:40:26] 2025-10-07 07:39:52,144 | INFO     | zombie collector waiting for pid 9242
[2025-10-07 09:40:26] 2025-10-07 07:39:52,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 09:40:26] 2025-10-07 07:39:52,145 | INFO     | collected zombie processes
[2025-10-07 09:40:26] 2025-10-07 07:39:52,145 | INFO     | will attempt to kill all subprocesses of pid=9242
[2025-10-07 09:40:26] 2025-10-07 07:39:52,301 | INFO     | process IDs to be killed: [9242] (in reverse order)
[2025-10-07 09:40:26] 2025-10-07 07:39:52,713 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 09:40:26] 2025-10-07 07:39:52,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 09:40:26] 2025-10-07 07:39:52,717 | INFO     | did not find any defunct processes belonging to 9242
[2025-10-07 09:40:26] 2025-10-07 07:39:52,720 | INFO     | did not find any defunct processes belonging to 9242
[2025-10-07 09:40:26] 2025-10-07 07:39:52,721 | INFO     | ready for new job
[2025-10-07 09:40:26] 2025-10-07 07:39:52,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 09:40:26] 2025-10-07 07:39:52,723 | INFO     | ***************************************
[2025-10-07 09:40:26] 2025-10-07 07:39:52,723 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 09:40:26] 2025-10-07 07:39:52,723 | INFO     | ***************************************
[2025-10-07 09:40:26] 2025-10-07 07:39:52,723 | INFO     | 
[2025-10-07 09:40:26] 2025-10-07 07:39:52,724 | INFO     | pilot is running in a VM
[2025-10-07 09:40:26] 2025-10-07 07:39:52,724 | INFO     | architecture information:
[2025-10-07 09:40:26] 2025-10-07 07:39:52,732 | INFO     | executing command: cat /etc/os-release
[2025-10-07 09:40:26] 2025-10-07 07:39:52,873 | INFO     | cat /etc/os-release:
[2025-10-07 09:40:26] NAME="CentOS Linux"
[2025-10-07 09:40:26] VERSION="7 (Core)"
[2025-10-07 09:40:26] ID="centos"
[2025-10-07 09:40:26] ID_LIKE="rhel fedora"
[2025-10-07 09:40:26] VERSION_ID="7"
[2025-10-07 09:40:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 09:40:26] ANSI_COLOR="0;31"
[2025-10-07 09:40:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 09:40:26] HOME_URL="https://www.centos.org/"
[2025-10-07 09:40:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 09:40:26] 
[2025-10-07 09:40:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 09:40:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 09:40:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 09:40:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 09:40:26] 
[2025-10-07 09:40:26] 2025-10-07 07:39:52,873 | INFO     | ***************************************
[2025-10-07 09:40:26] 2025-10-07 07:39:53,376 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-07 09:40:26] 2025-10-07 07:39:53,530 | INFO     | sufficient remaining disk space (496563650560 B)
[2025-10-07 09:40:26] 2025-10-07 07:39:53,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 09:40:26] 2025-10-07 07:39:53,531 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 09:40:26] 2025-10-07 07:39:53,531 | INFO     | update_server=False
[2025-10-07 09:40:26] 2025-10-07 07:39:53,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 09:40:26] 2025-10-07 07:39:53,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 09:40:26] 2025-10-07 07:39:53,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 09:40:26] 2025-10-07 07:39:53,532 | INFO     | aborting loop
[2025-10-07 09:40:26] 2025-10-07 07:39:53,650 | INFO     | all data control threads have been joined
[2025-10-07 09:40:26] 2025-10-07 07:39:53,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 09:40:26] 2025-10-07 07:39:54,036 | INFO     | all payload control threads have been joined
[2025-10-07 09:40:26] 2025-10-07 07:39:54,365 | INFO     | all job control threads have been joined
[2025-10-07 09:40:26] 2025-10-07 07:39:54,538 | INFO     | [job] job monitor thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:54,539 | INFO     | [job] retrieve thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:54,656 | INFO     | [data] control thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:54,774 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:55,042 | INFO     | [payload] control thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:55,159 | INFO     | [job] validate thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:55,186 | INFO     | [payload] failed_post thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:55,299 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:55,371 | INFO     | [job] control thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:55,753 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:55,759 | INFO     | [data] copytool_out thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:55,813 | INFO     | [data] copytool_in thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:55,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 09:40:26] 2025-10-07 07:39:55,870 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:55,995 | INFO     | [payload] validate_post thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:56,870 | INFO     | [job] queue monitor thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:39:57,537 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 09:40:26] 2025-10-07 07:40:15,903 | INFO     | [monitor] cgroup control has ended
[2025-10-07 09:40:26] 2025-10-07 07:40:17,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418738272064)>', '<ExcThread(monitor, started 140418285025024)>']
[2025-10-07 09:40:26] 2025-10-07 07:40:22,272 | INFO     | all workflow threads have been joined
[2025-10-07 09:40:26] 2025-10-07 07:40:22,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 09:40:26] 2025-10-07 07:40:22,273 | INFO     | traces error code: 0
[2025-10-07 09:40:26] 2025-10-07 07:40:22,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 09:40:26] 2025-10-07 07:40:23,791 | INFO     | PID=27605 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 09:40:26] 2025-10-07 07:40:23,791 | INFO     | .. there are 9 such processes running
[2025-10-07 09:40:26] 2025-10-07 07:40:23,792 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 09:40:26] 2025-10-07 07:40:23,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 09:40:26] 2025-10-07 07:40:23,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 09:40:26] 2025-10-07 07:40:23,792 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 09:40:26] 2025-10-07 07:40:23,792 | CRITICAL | thread 'MainThread' is not alive
[2025-10-07 09:40:26] 2025-10-07 07:40:23,792 | INFO     | [monitor] control thread has ended
[2025-10-07 09:40:26] 2025-10-07 07:40:24,088 [wrapper] ==== pilot stdout END ====
[2025-10-07 09:40:26] 2025-10-07 07:40:24,138 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 09:40:26] 2025-10-07 07:40:24,230 [wrapper] pilotpid: 27605
[2025-10-07 09:40:26] 2025-10-07 07:40:24,290 [wrapper] Pilot exit status: 0
[2025-10-07 09:40:26] 2025-10-07 07:40:24,512 [wrapper] pandaids: 6832257756
[2025-10-07 09:40:26] 2025-10-07 07:40:25,019 [wrapper] cleanup supervisor_pilot  8497 27606
[2025-10-07 09:40:26] 2025-10-07 07:40:25,045 [wrapper] Test setup, not cleaning
[2025-10-07 09:40:26] 2025-10-07 07:40:25,065 [wrapper] apfmon messages muted
[2025-10-07 09:40:26] 2025-10-07 07:40:25,090 [wrapper] ==== wrapper stdout END ====
[2025-10-07 09:40:26] 2025-10-07 07:40:25,112 [wrapper] ==== wrapper stderr END ====
[2025-10-07 09:40:26]  *** Error codes and diagnostics ***
[2025-10-07 09:40:26]     "exeErrorCode": 0,
[2025-10-07 09:40:26]     "exeErrorDiag": "",
[2025-10-07 09:40:26]     "pilotErrorCode": 0,
[2025-10-07 09:40:26]     "pilotErrorDiag": "",
[2025-10-07 09:40:26]  *** Listing of results directory ***
[2025-10-07 09:40:26] total 379284
[2025-10-07 09:40:26] -rwx------. 1 boinc boinc     36292 Oct  6 04:44 runpilot2-wrapper.sh
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc      5112 Oct  6 04:44 queuedata.json
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc    552446 Oct  6 04:44 pilot3.tar.gz
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc       100 Oct  7 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 09:40:26] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 06:03 run_atlas
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc       105 Oct  7 06:03 job.xml
[2025-10-07 09:40:26] -rw-r--r--. 2 boinc boinc 211538215 Oct  7 06:03 EVNT.46376901._003825.pool.root.1
[2025-10-07 09:40:26] -rw-r--r--. 2 boinc boinc     15120 Oct  7 06:03 start_atlas.sh
[2025-10-07 09:40:26] drwxrwx--x. 2 boinc boinc        68 Oct  7 06:03 shared
[2025-10-07 09:40:26] -rw-r--r--. 2 boinc boinc    565594 Oct  7 06:03 input.tar.gz
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc      6390 Oct  7 06:03 init_data.xml
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc         0 Oct  7 06:03 boinc_lockfile
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc      2519 Oct  7 06:03 pandaJob.out
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc    974984 Oct  7 06:05 agis_schedconf.cvmfs.json
[2025-10-07 09:40:26] drwx------. 4 boinc boinc      4096 Oct  7 06:05 pilot3
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc 168685637 Oct  7 09:37 HITS.46376905._103350.pool.root.1
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc       530 Oct  7 09:37 boinc_task_state.xml
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc      1013 Oct  7 09:38 memory_monitor_summary.json
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc   1560401 Oct  7 09:38 agis_ddmendpoints.agis.ALL.json
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc    426753 Oct  7 09:38 log.46376905._103350.job.log.tgz.1
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc      7783 Oct  7 09:39 heartbeat.json
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc        28 Oct  7 09:39 wrapper_checkpoint.txt
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc      8192 Oct  7 09:39 boinc_mmap_file
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc        95 Oct  7 09:40 pilot_heartbeat.json
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc       890 Oct  7 09:40 pilotlog.txt
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc   1715537 Oct  7 09:40 log.46376905._103350.job.log.1
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc       357 Oct  7 09:40 output.list
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc       620 Oct  7 09:40 runtime_log
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc   2160640 Oct  7 09:40 result.tar.gz
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc      8717 Oct  7 09:40 runtime_log.err
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc       657 Oct  7 09:40 iPgLDmEOqP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWKIMDm0dvSUo.diag
[2025-10-07 09:40:26] -rw-r--r--. 1 boinc boinc     20597 Oct  7 09:40 stderr.txt
[2025-10-07 09:40:26] HITS file was successfully produced:
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc 168685637 Oct  7 09:37 shared/HITS.pool.root.1
[2025-10-07 09:40:26]  *** Contents of shared directory: ***
[2025-10-07 09:40:26] total 374004
[2025-10-07 09:40:26] -rw-r--r--. 2 boinc boinc 211538215 Oct  7 06:03 ATLAS.root_0
[2025-10-07 09:40:26] -rw-r--r--. 2 boinc boinc     15120 Oct  7 06:03 start_atlas.sh
[2025-10-07 09:40:26] -rw-r--r--. 2 boinc boinc    565594 Oct  7 06:03 input.tar.gz
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc 168685637 Oct  7 09:37 HITS.pool.root.1
[2025-10-07 09:40:26] -rw-------. 1 boinc boinc   2160640 Oct  7 09:40 result.tar.gz
09:40:28 (23773): run_atlas exited; CPU time 45373.101390
09:40:28 (23773): called boinc_finish(0)

</stderr_txt>
]]>

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