Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
13:06:22 (803463): wrapper (7.7.26015): starting
13:06:22 (803463): wrapper: running run_atlas (--nthreads 2)
[2025-10-06 13:06:22] Arguments: --nthreads 2
[2025-10-06 13:06:22] Threads: 2
[2025-10-06 13:06:22] Checking for CVMFS
[2025-10-06 13:06:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-06 13:06:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-06 13:06:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-06 13:06:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-06 13:06:23] 2.11.0.0 3910605 8357 61448 151396 0 56 4832362 6144001 0 130560 0 18273081 99.997 273465 492 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-06 13:06:23] CVMFS is ok
[2025-10-06 13:06:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-06 13:06:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-06 13:06:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-06 13:06:23] Further information can be found at the LHC@home message board.
[2025-10-06 13:06:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-06 13:06:23] Checking for apptainer binary...
[2025-10-06 13:06:23] apptainer is not installed, using version from CVMFS
[2025-10-06 13:06:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-06 13:06:23] mordor
[2025-10-06 13:06:23] apptainer works
[2025-10-06 13:06:23] Set ATHENA_PROC_NUMBER=2
[2025-10-06 13:06:23] Set ATHENA_CORE_NUMBER=2
[2025-10-06 13:06:23] Starting ATLAS job with PandaID=6832256564
[2025-10-06 13:06:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-06 18:09:06]  *** The last 200 lines of the pilot log: ***
[2025-10-06 18:09:06] 2025-10-06 16:08:18,715 | INFO     | extracted standard memory fields from prmon json
[2025-10-06 18:09:06] 2025-10-06 16:08:18,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-06 18:09:06] 2025-10-06 16:08:18,716 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-06 18:09:06] 2025-10-06 16:08:18,716 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-06 18:09:06] 2025-10-06 16:08:18,720 | INFO     | fitting pss+swap vs Time
[2025-10-06 18:09:06] 2025-10-06 16:08:18,721 | INFO     | sum of square deviations: 8041713570.0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,723 | INFO     | sum of deviations: 12486663613.500002
[2025-10-06 18:09:06] 2025-10-06 16:08:18,723 | INFO     | mean x: 1759757809.5
[2025-10-06 18:09:06] 2025-10-06 16:08:18,723 | INFO     | mean y: 2258634.2736486485
[2025-10-06 18:09:06] 2025-10-06 16:08:18,723 | INFO     | -- intersect: -2730181860.8006015
[2025-10-06 18:09:06] 2025-10-06 16:08:18,723 | INFO     | intersect: -2730181860.8006015
[2025-10-06 18:09:06] 2025-10-06 16:08:18,723 | INFO     | chi2: 1.183949664025978
[2025-10-06 18:09:06] 2025-10-06 16:08:18,724 | INFO     | sum of square deviations: 7641036290.0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,725 | INFO     | sum of deviations: 12350207620.000002
[2025-10-06 18:09:06] 2025-10-06 16:08:18,725 | INFO     | mean x: 1759757657.0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,726 | INFO     | mean y: 2258582.3333333335
[2025-10-06 18:09:06] 2025-10-06 16:08:18,726 | INFO     | -- intersect: -2842037871.706247
[2025-10-06 18:09:06] 2025-10-06 16:08:18,726 | INFO     | intersect: -2842037871.706247
[2025-10-06 18:09:06] 2025-10-06 16:08:18,726 | INFO     | chi2: 1.184219918399352
[2025-10-06 18:09:06] 2025-10-06 16:08:18,726 | INFO     | current chi2=1.184219918399352 (change=-0.02282650872632072 %)
[2025-10-06 18:09:06] 2025-10-06 16:08:18,726 | INFO     | right removable region: 290
[2025-10-06 18:09:06] 2025-10-06 16:08:18,726 | INFO     | sum of square deviations: 7641036290.0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,728 | INFO     | sum of deviations: -4820493829.000006
[2025-10-06 18:09:06] 2025-10-06 16:08:18,728 | INFO     | mean x: 1759757962.0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,728 | INFO     | mean y: 2265083.16838488
[2025-10-06 18:09:06] 2025-10-06 16:08:18,728 | INFO     | -- intersect: 1112442037.4980478
[2025-10-06 18:09:06] 2025-10-06 16:08:18,728 | INFO     | intersect: 1112442037.4980478
[2025-10-06 18:09:06] 2025-10-06 16:08:18,729 | INFO     | chi2: 0.09091627452871913
[2025-10-06 18:09:06] 2025-10-06 16:08:18,729 | INFO     | current chi2=0.09091627452871913 (change=92.32093413333456 %)
[2025-10-06 18:09:06] 2025-10-06 16:08:18,729 | INFO     | sum of square deviations: 7253894147.5
[2025-10-06 18:09:06] 2025-10-06 16:08:18,731 | INFO     | sum of deviations: 4314634401.500001
[2025-10-06 18:09:06] 2025-10-06 16:08:18,731 | INFO     | mean x: 1759758114.5
[2025-10-06 18:09:06] 2025-10-06 16:08:18,731 | INFO     | mean y: 2261515.611888112
[2025-10-06 18:09:06] 2025-10-06 16:08:18,731 | INFO     | -- intersect: -1044447017.0398116
[2025-10-06 18:09:06] 2025-10-06 16:08:18,731 | INFO     | intersect: -1044447017.0398116
[2025-10-06 18:09:06] 2025-10-06 16:08:18,731 | INFO     | chi2: 0.003964347328574362
[2025-10-06 18:09:06] 2025-10-06 16:08:18,731 | INFO     | current chi2=0.003964347328574362 (change=95.6395624995368 %)
[2025-10-06 18:09:06] 2025-10-06 16:08:18,731 | INFO     | sum of square deviations: 6880054580.0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,733 | INFO     | sum of deviations: 3035392817.9999995
[2025-10-06 18:09:06] 2025-10-06 16:08:18,733 | INFO     | mean x: 1759758267.0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,733 | INFO     | mean y: 2262037.1459074733
[2025-10-06 18:09:06] 2025-10-06 16:08:18,733 | INFO     | -- intersect: -774120990.4823304
[2025-10-06 18:09:06] 2025-10-06 16:08:18,733 | INFO     | intersect: -774120990.4823304
[2025-10-06 18:09:06] 2025-10-06 16:08:18,734 | INFO     | chi2: 0.0033405661258241407
[2025-10-06 18:09:06] 2025-10-06 16:08:18,734 | INFO     | current chi2=0.0033405661258241407 (change=15.73477677533725 %)
[2025-10-06 18:09:06] 2025-10-06 16:08:18,734 | INFO     | left removable region: 30
[2025-10-06 18:09:06] 2025-10-06 16:08:18,734 | INFO     | sum of square deviations: 5449944045.0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,735 | INFO     | sum of deviations: 1106145085.9999988
[2025-10-06 18:09:06] 2025-10-06 16:08:18,735 | INFO     | mean x: 1759758541.5
[2025-10-06 18:09:06] 2025-10-06 16:08:18,735 | INFO     | mean y: 2262929.923076923
[2025-10-06 18:09:06] 2025-10-06 16:08:18,736 | INFO     | -- intersect: -354905556.0566264
[2025-10-06 18:09:06] 2025-10-06 16:08:18,736 | INFO     | intersect: -354905556.0566264
[2025-10-06 18:09:06] 2025-10-06 16:08:18,736 | INFO     | chi2: 0.002730116836573165
[2025-10-06 18:09:06] 2025-10-06 16:08:18,736 | INFO     | -- intersect: -354905556.0566264
[2025-10-06 18:09:06] 2025-10-06 16:08:18,736 | INFO     | current memory leak: 0.20 B/s (using 260 data points, chi2=0.00)
[2025-10-06 18:09:06] 2025-10-06 16:08:18,736 | INFO     | could have reported an average CPU frequency of 2990 MHz (13 samples)
[2025-10-06 18:09:06] 2025-10-06 16:08:18,736 | INFO     | ..............................
[2025-10-06 18:09:06] 2025-10-06 16:08:18,737 | INFO     | . Timing measurements:
[2025-10-06 18:09:06] 2025-10-06 16:08:18,737 | INFO     | . get job = 0 s
[2025-10-06 18:09:06] 2025-10-06 16:08:18,737 | INFO     | . initial setup = 1 s
[2025-10-06 18:09:06] 2025-10-06 16:08:18,737 | INFO     | . payload setup = 3 s
[2025-10-06 18:09:06] 2025-10-06 16:08:18,737 | INFO     | . stage-in = 0 s
[2025-10-06 18:09:06] 2025-10-06 16:08:18,737 | INFO     | . payload execution = 18055 s
[2025-10-06 18:09:06] 2025-10-06 16:08:18,737 | INFO     | . stage-out = 1 s
[2025-10-06 18:09:06] 2025-10-06 16:08:18,737 | INFO     | . log creation = 0 s
[2025-10-06 18:09:06] 2025-10-06 16:08:18,737 | INFO     | ..............................
[2025-10-06 18:09:06] 2025-10-06 16:08:18,804 | INFO     | 
[2025-10-06 18:09:06] 2025-10-06 16:08:18,804 | INFO     | job summary report
[2025-10-06 18:09:06] 2025-10-06 16:08:18,804 | INFO     | --------------------------------------------------
[2025-10-06 18:09:06] 2025-10-06 16:08:18,804 | INFO     | PanDA job id: 6832256564
[2025-10-06 18:09:06] 2025-10-06 16:08:18,804 | INFO     | task id: 46376905
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | errors: (none)
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | pilot state: finished 
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | transexitcode: 0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | exeerrorcode: 0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | exeerrordiag: 
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | exitcode: 0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | exitmsg: OK
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | cpuconsumptiontime: 35174 s
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | nevents: 400
[2025-10-06 18:09:06] 2025-10-06 16:08:18,805 | INFO     | neventsw: 0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,806 | INFO     | pid: 813441
[2025-10-06 18:09:06] 2025-10-06 16:08:18,806 | INFO     | pgrp: 813441
[2025-10-06 18:09:06] 2025-10-06 16:08:18,806 | INFO     | corecount: 2
[2025-10-06 18:09:06] 2025-10-06 16:08:18,806 | INFO     | event service: False
[2025-10-06 18:09:06] 2025-10-06 16:08:18,806 | INFO     | sizes: {0: 2347988, 1: 2348851, 4: 2349113, 12: 2349141, 18062: 2381583, 18064: 2390595, 18065: 2390779, 18095: 2390973}
[2025-10-06 18:09:06] 2025-10-06 16:08:18,806 | INFO     | --------------------------------------------------
[2025-10-06 18:09:06] 2025-10-06 16:08:18,806 | INFO     | 
[2025-10-06 18:09:06] 2025-10-06 16:08:18,806 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-06 18:09:06] 2025-10-06 16:08:18,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,820 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-06 18:09:06] 2025-10-06 16:08:18,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,822 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-06 18:09:06] 2025-10-06 16:08:18,822 | INFO     | job 6832256564 has completed (purged errors)
[2025-10-06 18:09:06] 2025-10-06 16:08:18,822 | INFO     | overall cleanup function is called
[2025-10-06 18:09:06] 2025-10-06 16:08:19,827 | INFO     | --- collectZombieJob: --- 10, [813441]
[2025-10-06 18:09:06] 2025-10-06 16:08:19,827 | INFO     | zombie collector waiting for pid 813441
[2025-10-06 18:09:06] 2025-10-06 16:08:19,828 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-06 18:09:06] 2025-10-06 16:08:19,828 | INFO     | collected zombie processes
[2025-10-06 18:09:06] 2025-10-06 16:08:19,828 | INFO     | will attempt to kill all subprocesses of pid=813441
[2025-10-06 18:09:06] 2025-10-06 16:08:19,888 | INFO     | process IDs to be killed: [813441] (in reverse order)
[2025-10-06 18:09:06] 2025-10-06 16:08:19,916 | WARNING  | found no corresponding commands to process id(s)
[2025-10-06 18:09:06] 2025-10-06 16:08:19,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-06 18:09:06] 2025-10-06 16:08:19,918 | INFO     | did not find any defunct processes belonging to 813441
[2025-10-06 18:09:06] 2025-10-06 16:08:19,919 | INFO     | did not find any defunct processes belonging to 813441
[2025-10-06 18:09:06] 2025-10-06 16:08:19,919 | INFO     | ready for new job
[2025-10-06 18:09:06] 2025-10-06 16:08:19,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-06 18:09:06] 2025-10-06 16:08:19,921 | INFO     | ***************************************
[2025-10-06 18:09:06] 2025-10-06 16:08:19,921 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-06 18:09:06] 2025-10-06 16:08:19,921 | INFO     | ***************************************
[2025-10-06 18:09:06] 2025-10-06 16:08:19,921 | INFO     | 
[2025-10-06 18:09:06] 2025-10-06 16:08:19,939 | INFO     | architecture information:
[2025-10-06 18:09:06] 2025-10-06 16:08:19,939 | INFO     | executing command: cat /etc/os-release
[2025-10-06 18:09:06] 2025-10-06 16:08:19,951 | INFO     | cat /etc/os-release:
[2025-10-06 18:09:06] NAME="CentOS Linux"
[2025-10-06 18:09:06] VERSION="7 (Core)"
[2025-10-06 18:09:06] ID="centos"
[2025-10-06 18:09:06] ID_LIKE="rhel fedora"
[2025-10-06 18:09:06] VERSION_ID="7"
[2025-10-06 18:09:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-06 18:09:06] ANSI_COLOR="0;31"
[2025-10-06 18:09:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-06 18:09:06] HOME_URL="https://www.centos.org/"
[2025-10-06 18:09:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-06 18:09:06] 
[2025-10-06 18:09:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-06 18:09:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-06 18:09:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-06 18:09:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-06 18:09:06] 
[2025-10-06 18:09:06] 2025-10-06 16:08:19,951 | INFO     | ***************************************
[2025-10-06 18:09:06] 2025-10-06 16:08:20,454 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-06 18:09:06] 2025-10-06 16:08:20,467 | INFO     | sufficient remaining disk space (418532818944 B)
[2025-10-06 18:09:06] 2025-10-06 16:08:20,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-06 18:09:06] 2025-10-06 16:08:20,468 | INFO     | current server update state: UPDATING_FINAL
[2025-10-06 18:09:06] 2025-10-06 16:08:20,468 | INFO     | update_server=False
[2025-10-06 18:09:06] 2025-10-06 16:08:20,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-06 18:09:06] 2025-10-06 16:08:20,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-06 18:09:06] 2025-10-06 16:08:20,511 | INFO     | all data control threads have been joined
[2025-10-06 18:09:06] 2025-10-06 16:08:20,763 | INFO     | all payload control threads have been joined
[2025-10-06 18:09:06] 2025-10-06 16:08:20,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-06 18:09:06] 2025-10-06 16:08:20,951 | INFO     | aborting loop
[2025-10-06 18:09:06] 2025-10-06 16:08:21,469 | INFO     | [job] retrieve thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:21,471 | INFO     | [job] queue monitor thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:21,515 | INFO     | [data] control thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:21,566 | INFO     | all job control threads have been joined
[2025-10-06 18:09:06] 2025-10-06 16:08:21,616 | INFO     | [job] create_data_payload thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:21,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-06 18:09:06] 2025-10-06 16:08:21,706 | INFO     | [payload] execute_payloads thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:21,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-06 18:09:06] 2025-10-06 16:08:21,765 | INFO     | [payload] control thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:21,956 | INFO     | [job] job monitor thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:22,309 | INFO     | [job] validate thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:22,492 | INFO     | [payload] validate_post thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:22,532 | INFO     | [data] copytool_in thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:22,572 | INFO     | [job] control thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:22,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:22,693 | INFO     | [payload] validate_pre thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:22,902 | INFO     | [payload] failed_post thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:23,691 | INFO     | [data] copytool_out thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:25,751 | INFO     | [data] queue_monitor thread has finished
[2025-10-06 18:09:06] 2025-10-06 16:08:51,291 | INFO     | PID=807104 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-06 18:09:06] 2025-10-06 16:08:51,292 | INFO     | found 0 job(s) in 20 queues
[2025-10-06 18:09:06] 2025-10-06 16:08:51,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-06 18:09:06] 2025-10-06 16:08:51,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-06 18:09:06] 2025-10-06 16:09:00,328 | INFO     | [monitor] cgroup control has ended
[2025-10-06 18:09:06] 2025-10-06 16:09:01,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139666883639104)>', '<ExcThread(monitor, started 139666095339264)>']
[2025-10-06 18:09:06] 2025-10-06 16:09:01,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-06 18:09:06] 2025-10-06 16:09:01,335 | INFO     | [monitor] control thread has ended
[2025-10-06 18:09:06] 2025-10-06 16:09:06,330 | INFO     | all workflow threads have been joined
[2025-10-06 18:09:06] 2025-10-06 16:09:06,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-06 18:09:06] 2025-10-06 16:09:06,331 | INFO     | traces error code: 0
[2025-10-06 18:09:06] 2025-10-06 16:09:06,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-06 18:09:06] 2025-10-06 16:09:06,421 [wrapper] ==== pilot stdout END ====
[2025-10-06 18:09:06] 2025-10-06 16:09:06,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-06 18:09:06] 2025-10-06 16:09:06,424 [wrapper] pilotpid: 807104
[2025-10-06 18:09:06] 2025-10-06 16:09:06,426 [wrapper] Pilot exit status: 0
[2025-10-06 18:09:06] 2025-10-06 16:09:06,434 [wrapper] pandaids: 6832256564
[2025-10-06 18:09:06] 2025-10-06 16:09:06,447 [wrapper] cleanup supervisor_pilot  842457 807105
[2025-10-06 18:09:06] 2025-10-06 16:09:06,449 [wrapper] Test setup, not cleaning
[2025-10-06 18:09:06] 2025-10-06 16:09:06,451 [wrapper] apfmon messages muted
[2025-10-06 18:09:06] 2025-10-06 16:09:06,452 [wrapper] ==== wrapper stdout END ====
[2025-10-06 18:09:06] 2025-10-06 16:09:06,454 [wrapper] ==== wrapper stderr END ====
[2025-10-06 18:09:06]  *** Error codes and diagnostics ***
[2025-10-06 18:09:06]     "exeErrorCode": 0,
[2025-10-06 18:09:06]     "exeErrorDiag": "",
[2025-10-06 18:09:06]     "pilotErrorCode": 0,
[2025-10-06 18:09:06]     "pilotErrorDiag": "",
[2025-10-06 18:09:06]  *** Listing of results directory ***
[2025-10-06 18:09:06] total 394344
[2025-10-06 18:09:06] -rw-r--r-- 1 root root    552446 Oct  6 04:02 pilot3.tar.gz
[2025-10-06 18:09:06] -rw-r--r-- 1 root root      5112 Oct  6 04:05 queuedata.json
[2025-10-06 18:09:06] -rwx------ 1 4871 1028     36292 Oct  6 04:06 runpilot2-wrapper.sh
[2025-10-06 18:09:06] -rw-r--r-- 1 root root       100 Oct  6 13:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-06 18:09:06] -rwxr-xr-x 1 root root      7986 Oct  6 13:06 run_atlas
[2025-10-06 18:09:06] -rw-r--r-- 1 root root       105 Oct  6 13:06 job.xml
[2025-10-06 18:09:06] -rw-r--r-- 2 root root     15120 Oct  6 13:06 start_atlas.sh
[2025-10-06 18:09:06] drwxrwx--x 2 root root      4096 Oct  6 13:06 shared
[2025-10-06 18:09:06] -rw-r--r-- 2 root root    565604 Oct  6 13:06 input.tar.gz
[2025-10-06 18:09:06] -rw-r--r-- 1 root root      6136 Oct  6 13:06 init_data.xml
[2025-10-06 18:09:06] -rw-r--r-- 2 root root 213360168 Oct  6 13:06 EVNT.46376901._003799.pool.root.1
[2025-10-06 18:09:06] -rw-r--r-- 1 root root         0 Oct  6 13:06 boinc_lockfile
[2025-10-06 18:09:06] -rw-r--r-- 1 root root      2519 Oct  6 13:06 pandaJob.out
[2025-10-06 18:09:06] -rw------- 1 root root    975011 Oct  6 13:06 agis_schedconf.cvmfs.json
[2025-10-06 18:09:06] drwxr-xr-x 4  320  320      4096 Oct  6 13:06 pilot3
[2025-10-06 18:09:06] -rw------- 1 root root 180767057 Oct  6 18:07 HITS.46376905._102697.pool.root.1
[2025-10-06 18:09:06] -rw------- 1 root root      1033 Oct  6 18:07 memory_monitor_summary.json
[2025-10-06 18:09:06] -rw-r--r-- 1 root root       530 Oct  6 18:07 boinc_task_state.xml
[2025-10-06 18:09:06] -rw------- 1 root root   1560401 Oct  6 18:07 agis_ddmendpoints.agis.ALL.json
[2025-10-06 18:09:06] -rw------- 1 root root    406884 Oct  6 18:07 log.46376905._102697.job.log.tgz.1
[2025-10-06 18:09:06] -rw------- 1 root root      7778 Oct  6 18:08 heartbeat.json
[2025-10-06 18:09:06] -rw-r--r-- 1 root root      8192 Oct  6 18:08 boinc_mmap_file
[2025-10-06 18:09:06] -rw-r--r-- 1 root root        28 Oct  6 18:08 wrapper_checkpoint.txt
[2025-10-06 18:09:06] -rw------- 1 root root        95 Oct  6 18:08 pilot_heartbeat.json
[2025-10-06 18:09:06] -rw------- 1 root root      4755 Oct  6 18:09 pilotlog.txt
[2025-10-06 18:09:06] -rw------- 1 root root   2489324 Oct  6 18:09 log.46376905._102697.job.log.1
[2025-10-06 18:09:06] -rw------- 1 root root       357 Oct  6 18:09 output.list
[2025-10-06 18:09:06] -rw-r--r-- 1 root root       620 Oct  6 18:09 runtime_log
[2025-10-06 18:09:06] -rw------- 1 root root   2918400 Oct  6 18:09 result.tar.gz
[2025-10-06 18:09:06] -rw-r--r-- 1 root root      8767 Oct  6 18:09 runtime_log.err
[2025-10-06 18:09:06] -rw------- 1 root root       654 Oct  6 18:09 5yMNDmDnpP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlBSNDmaizDRo.diag
[2025-10-06 18:09:06] -rw-r--r-- 1 root root     21014 Oct  6 18:09 stderr.txt
[2025-10-06 18:09:06] HITS file was successfully produced:
[2025-10-06 18:09:06] -rw------- 1 root root 180767057 Oct  6 18:07 shared/HITS.pool.root.1
[2025-10-06 18:09:06]  *** Contents of shared directory: ***
[2025-10-06 18:09:06] total 388320
[2025-10-06 18:09:06] -rw-r--r-- 2 root root     15120 Oct  6 13:06 start_atlas.sh
[2025-10-06 18:09:06] -rw-r--r-- 2 root root    565604 Oct  6 13:06 input.tar.gz
[2025-10-06 18:09:06] -rw-r--r-- 2 root root 213360168 Oct  6 13:06 ATLAS.root_0
[2025-10-06 18:09:06] -rw------- 1 root root 180767057 Oct  6 18:07 HITS.pool.root.1
[2025-10-06 18:09:06] -rw------- 1 root root   2918400 Oct  6 18:09 result.tar.gz
18:09:08 (803463): run_atlas exited; CPU time 35300.499851
18:09:08 (803463): called boinc_finish(0)

</stderr_txt>
]]>

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