Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:38:01 (992508): wrapper (7.7.26015): starting
22:38:01 (992508): wrapper: running run_atlas (--nthreads 12)
[2025-10-05 22:38:01] Arguments: --nthreads 12
[2025-10-05 22:38:01] Threads: 12
[2025-10-05 22:38:01] Checking for CVMFS
[2025-10-05 22:38:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-05 22:38:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-05 22:38:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-05 22:38:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-05 22:38:02] 2.11.5.0 2798 22444 234540 151388 2 201 27167750 45568000 23712 130560 0 212510977 99.865 86859227 22047 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-05 22:38:02] CVMFS is ok
[2025-10-05 22:38:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-05 22:38:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-05 22:38:02] Further information can be found at the LHC@home message board.
[2025-10-05 22:38:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-05 22:38:02] Checking for apptainer binary...
[2025-10-05 22:38:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-05 22:38:02] Running /usr/bin/apptainer --version
[2025-10-05 22:38:03] apptainer version 1.4.1-1.el9
[2025-10-05 22:38:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-05 22:38:04] wns0065.triumf.lcg
[2025-10-05 22:38:04] apptainer works
[2025-10-05 22:38:04] Set ATHENA_PROC_NUMBER=12
[2025-10-05 22:38:04] Set ATHENA_CORE_NUMBER=12
[2025-10-05 22:38:04] Starting ATLAS job with PandaID=6832321857
[2025-10-05 22:38:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-05 22:43:02]  *** The last 200 lines of the pilot log: ***
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | WARNING  | wrong length of table data, x=[1759729190.0], y=[1129.0] (must be same and length>=4)
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | could have reported an average CPU frequency of 2741 MHz (4 samples)
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | ..............................
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . Timing measurements:
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . get job = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . initial setup = 4 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . payload setup = 21 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . stage-in = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . payload execution = 35 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . stage-out = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . log creation = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | ..............................
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 22:43:02] 2025-10-06 05:42:26,918 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832321857/pilotlog.txt
[2025-10-05 22:43:02] 2025-10-06 05:42:26,929 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-05 22:43:02] - Log from pilotlog.txt -
[2025-10-05 22:43:02] 2025-10-06 05:42:26,915 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832321857/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | INFO     | extracted standard info from prmon json
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | WARNING  | wrong length of table data, x=[1759729190.0], y=[1129.0] (must be same and length>=4)
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | could have reported an average CPU frequency of 2741 MHz (4 samples)
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | ..............................
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . Timing measurements:
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . get job = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . initial setup = 4 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . payload setup = 21 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . stage-in = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . payload execution = 35 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . stage-out = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . log creation = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | ..............................
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 22:43:02] 2025-10-06 05:42:26,918 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832321857/pilotlog.txt
[2025-10-05 22:43:02] 2025-10-06 05:42:26,929 | WARNING  | 
[2025-10-05 22:43:02] [begin log extracts]
[2025-10-05 22:43:02] - Log from pilotlog.txt -
[2025-10-05 22:43:02] 2025-10-06 05:42:26,915 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6832321857/memory_monitor_summary.json (trf name=prmon)
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | INFO     | extracted standard info from prmon json
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | INFO     | extracted standard memory fields from prmon json
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-05 22:43:02] 2025-10-06 05:42:26,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | WARNING  | wrong length of table data, x=[1759729190.0], y=[1129.0] (must be same and length>=4)
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | could have reported an average CPU frequency of 2741 MHz (4 samples)
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | ..............................
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . Timing measurements:
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . get job = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . initial setup = 4 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . payload setup = 21 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . stage-in = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . payload execution = 35 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . stage-out = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | . log creation = 0 s
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | ..............................
[2025-10-05 22:43:02] 2025-10-06 05:42:26,917 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-05 22:43:02] 2025-10-06 05:42:26,918 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6832321857/pilotlog.txt
[2025-10-05 22:43:02] [end log extracts]
[2025-10-05 22:43:02] 2025-10-06 05:42:26,929 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-05 22:43:02] 2025-10-06 05:42:26,930 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-05 22:43:02] 2025-10-06 05:42:27,159 | INFO     | time since job start (234s) is within the limit (172800.0s)
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | 
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | job summary report
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | --------------------------------------------------
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | PanDA job id: 6832321857
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | task id: 46376905
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-05 22:40:06,357 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | pilot state: failed 
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | transexitcode: 65
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | exeerrorcode: 65
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | exitcode: 65
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | cpuconsumptiontime: 16 s
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | nevents: 0
[2025-10-05 22:43:02] 2025-10-06 05:42:27,421 | INFO     | neventsw: 0
[2025-10-05 22:43:02] 2025-10-06 05:42:27,422 | INFO     | pid: 1003135
[2025-10-05 22:43:02] 2025-10-06 05:42:27,422 | INFO     | pgrp: 1003135
[2025-10-05 22:43:02] 2025-10-06 05:42:27,422 | INFO     | corecount: 12
[2025-10-05 22:43:02] 2025-10-06 05:42:27,422 | INFO     | event service: False
[2025-10-05 22:43:02] 2025-10-06 05:42:27,422 | INFO     | sizes: {0: 2347988, 1: 2348670, 2: 2348869, 3: 2348869, 13: 2348897, 22: 2349215, 24: 2349371, 62: 2376864, 194: 2377002}
[2025-10-05 22:43:02] 2025-10-06 05:42:27,422 | INFO     | --------------------------------------------------
[2025-10-05 22:43:02] 2025-10-06 05:42:27,422 | INFO     | 
[2025-10-05 22:43:02] 2025-10-06 05:42:27,422 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-05 22:43:02] 2025-10-06 05:42:27,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,484 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,484 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,484 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | job 6832321857 has completed (purged errors)
[2025-10-05 22:43:02] 2025-10-06 05:42:27,485 | INFO     | overall cleanup function is called
[2025-10-05 22:43:02] 2025-10-06 05:42:28,493 | INFO     | --- collectZombieJob: --- 10, [1003135]
[2025-10-05 22:43:02] 2025-10-06 05:42:28,493 | INFO     | zombie collector waiting for pid 1003135
[2025-10-05 22:43:02] 2025-10-06 05:42:28,493 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-05 22:43:02] 2025-10-06 05:42:28,493 | INFO     | collected zombie processes
[2025-10-05 22:43:02] 2025-10-06 05:42:28,493 | INFO     | will attempt to kill all subprocesses of pid=1003135
[2025-10-05 22:43:02] 2025-10-06 05:42:29,058 | INFO     | process IDs to be killed: [1003135] (in reverse order)
[2025-10-05 22:43:02] 2025-10-06 05:42:29,389 | WARNING  | found no corresponding commands to process id(s)
[2025-10-05 22:43:02] 2025-10-06 05:42:29,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-05 22:43:02] 2025-10-06 05:42:29,415 | INFO     | did not find any defunct processes belonging to 1003135
[2025-10-05 22:43:02] 2025-10-06 05:42:29,440 | INFO     | did not find any defunct processes belonging to 1003135
[2025-10-05 22:43:02] 2025-10-06 05:42:29,440 | INFO     | ready for new job
[2025-10-05 22:43:02] 2025-10-06 05:42:29,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-05 22:43:02] 2025-10-06 05:42:29,442 | INFO     | ***************************************
[2025-10-05 22:43:02] 2025-10-06 05:42:29,442 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-05 22:43:02] 2025-10-06 05:42:29,442 | INFO     | ***************************************
[2025-10-05 22:43:02] 2025-10-06 05:42:29,442 | INFO     | 
[2025-10-05 22:43:02] 2025-10-06 05:42:29,451 | INFO     | architecture information:
[2025-10-05 22:43:02] 2025-10-06 05:42:29,456 | INFO     | executing command: cat /etc/os-release
[2025-10-05 22:43:02] 2025-10-06 05:42:29,527 | INFO     | cat /etc/os-release:
[2025-10-05 22:43:02] NAME="CentOS Linux"
[2025-10-05 22:43:02] VERSION="7 (Core)"
[2025-10-05 22:43:02] ID="centos"
[2025-10-05 22:43:02] ID_LIKE="rhel fedora"
[2025-10-05 22:43:02] VERSION_ID="7"
[2025-10-05 22:43:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-05 22:43:02] ANSI_COLOR="0;31"
[2025-10-05 22:43:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-05 22:43:02] HOME_URL="https://www.centos.org/"
[2025-10-05 22:43:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-05 22:43:02] 
[2025-10-05 22:43:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-05 22:43:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-05 22:43:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-05 22:43:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-05 22:43:02] 
[2025-10-05 22:43:02] 2025-10-06 05:42:29,527 | INFO     | ***************************************
[2025-10-05 22:43:02] 2025-10-06 05:42:30,031 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-05 22:43:02] 2025-10-06 05:42:30,064 | INFO     | sufficient remaining disk space (2114448261120 B)
[2025-10-05 22:43:02] 2025-10-06 05:42:30,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-05 22:43:02] 2025-10-06 05:42:30,065 | INFO     | current server update state: UPDATING_FINAL
[2025-10-05 22:43:02] 2025-10-06 05:42:30,065 | INFO     | update_server=False
[2025-10-05 22:43:02] 2025-10-06 05:42:30,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-05 22:43:02] 2025-10-06 05:42:30,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-05 22:43:02] 2025-10-06 05:42:30,081 | INFO     | aborting loop
[2025-10-05 22:43:02] 2025-10-06 05:42:31,071 | INFO     | [job] retrieve thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:31,098 | INFO     | [job] job monitor thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:31,101 | INFO     | [payload] execute_payloads thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:31,144 | INFO     | [payload] failed_post thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:31,149 | INFO     | all data control threads have been joined
[2025-10-05 22:43:02] 2025-10-06 05:42:31,236 | INFO     | all payload control threads have been joined
[2025-10-05 22:43:02] 2025-10-06 05:42:31,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-05 22:43:02] 2025-10-06 05:42:31,438 | INFO     | all job control threads have been joined
[2025-10-05 22:43:02] 2025-10-06 05:42:31,600 | INFO     | [payload] validate_pre thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:31,706 | INFO     | [job] validate thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:31,796 | INFO     | [data] copytool_in thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:31,800 | INFO     | [job] create_data_payload thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:32,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-05 22:43:02] 2025-10-06 05:42:32,155 | INFO     | [data] control thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:32,171 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:32,242 | INFO     | [payload] control thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:32,327 | INFO     | [payload] validate_post thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:32,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-05 22:43:02] 2025-10-06 05:42:32,444 | INFO     | [job] control thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:32,917 | INFO     | [monitor] cgroup control has ended
[2025-10-05 22:43:02] 2025-10-06 05:42:33,015 | INFO     | [job] queue monitor thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:33,295 | INFO     | [data] copytool_out thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:36,346 | INFO     | [data] queue_monitor thread has finished
[2025-10-05 22:43:02] 2025-10-06 05:42:36,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752257599296)>', '<ExcThread(monitor, started 139751726249728)>']
[2025-10-05 22:43:02] 2025-10-06 05:42:41,790 | INFO     | all workflow threads have been joined
[2025-10-05 22:43:02] 2025-10-06 05:42:41,790 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-05 22:43:02] 2025-10-06 05:42:41,790 | INFO     | traces error code: 0
[2025-10-05 22:43:02] 2025-10-06 05:42:41,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-05 22:43:02] 2025-10-06 05:43:00,758 | INFO     | PID=996302 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-05 22:43:02] 2025-10-06 05:43:00,758 | INFO     | .. there are 42 such processes running
[2025-10-05 22:43:02] 2025-10-06 05:43:00,759 | INFO     | found 0 job(s) in 20 queues
[2025-10-05 22:43:02] 2025-10-06 05:43:00,759 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-05 22:43:02] 2025-10-06 05:43:00,759 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-05 22:43:02] 2025-10-06 05:43:00,759 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-05 22:43:02] 2025-10-06 05:43:00,759 | INFO     | [monitor] control thread has ended
[2025-10-05 22:43:02] 2025-10-06 05:43:01,295 [wrapper] ==== pilot stdout END ====
[2025-10-05 22:43:02] 2025-10-06 05:43:01,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-05 22:43:02] 2025-10-06 05:43:01,318 [wrapper] pilotpid: 996302
[2025-10-05 22:43:02] 2025-10-06 05:43:01,330 [wrapper] Pilot exit status: 0
[2025-10-05 22:43:02] 2025-10-06 05:43:01,520 [wrapper] pandaids: 6832321857
[2025-10-05 22:43:02] 2025-10-06 05:43:01,570 [wrapper] cleanup supervisor_pilot  996309 996303
[2025-10-05 22:43:02] 2025-10-06 05:43:01,573 [wrapper] Test setup, not cleaning
[2025-10-05 22:43:02] 2025-10-06 05:43:01,575 [wrapper] apfmon messages muted
[2025-10-05 22:43:02] 2025-10-06 05:43:01,576 [wrapper] ==== wrapper stdout END ====
[2025-10-05 22:43:02] 2025-10-06 05:43:01,578 [wrapper] ==== wrapper stderr END ====
[2025-10-05 22:43:02]  *** Error codes and diagnostics ***
[2025-10-05 22:43:02]     "exeErrorCode": 65,
[2025-10-05 22:43:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 22:43:02]     "pilotErrorCode": 1305,
[2025-10-05 22:43:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-05 22:43:02]  *** Listing of results directory ***
[2025-10-05 22:43:02] total 212128
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc    552446 Oct  5 20:29 pilot3.tar.gz
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc      5112 Oct  5 20:34 queuedata.json
[2025-10-05 22:43:02] -rwx------. 1 boinc boinc     36292 Oct  5 20:34 runpilot2-wrapper.sh
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc       100 Oct  5 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-05 22:43:02] -rwxr-xr-x. 1 boinc boinc      7986 Oct  5 22:38 run_atlas
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc       105 Oct  5 22:38 job.xml
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc      6594 Oct  5 22:38 init_data.xml
[2025-10-05 22:43:02] -rw-r--r--. 2 boinc boinc 213112191 Oct  5 22:38 EVNT.46376901._003858.pool.root.1
[2025-10-05 22:43:02] -rw-r--r--. 2 boinc boinc     15120 Oct  5 22:38 start_atlas.sh
[2025-10-05 22:43:02] drwxrwx--x. 2 boinc boinc      4096 Oct  5 22:38 shared
[2025-10-05 22:43:02] -rw-r--r--. 2 boinc boinc    565601 Oct  5 22:38 input.tar.gz
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc         0 Oct  5 22:38 boinc_lockfile
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc      2519 Oct  5 22:38 pandaJob.out
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc    971518 Oct  5 22:38 agis_schedconf.cvmfs.json
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc   1560401 Oct  5 22:38 agis_ddmendpoints.agis.ALL.json
[2025-10-05 22:43:02] drwx------. 4 boinc boinc      4096 Oct  5 22:38 pilot3
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc       524 Oct  5 22:40 boinc_task_state.xml
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc       961 Oct  5 22:40 memory_monitor_summary.json
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc     21677 Oct  5 22:40 log.46376905._104227.job.log.tgz.1
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc      8387 Oct  5 22:42 heartbeat.json
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc        22 Oct  5 22:42 wrapper_checkpoint.txt
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc      8192 Oct  5 22:42 boinc_mmap_file
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc       822 Oct  5 22:43 pilotlog.txt
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc        95 Oct  5 22:43 pilot_heartbeat.json
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc     90158 Oct  5 22:43 log.46376905._104227.job.log.1
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc       188 Oct  5 22:43 output.list
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc       620 Oct  5 22:43 runtime_log
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc    133120 Oct  5 22:43 result.tar.gz
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc      8528 Oct  5 22:43 runtime_log.err
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc       645 Oct  5 22:43 9DhLDmXArP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsPIMDmWGrgIo.diag
[2025-10-05 22:43:02] -rw-r--r--. 1 boinc boinc     21816 Oct  5 22:43 stderr.txt
[2025-10-05 22:43:02] No HITS result produced
[2025-10-05 22:43:02]  *** Contents of shared directory: ***
[2025-10-05 22:43:02] total 208824
[2025-10-05 22:43:02] -rw-r--r--. 2 boinc boinc 213112191 Oct  5 22:38 ATLAS.root_0
[2025-10-05 22:43:02] -rw-r--r--. 2 boinc boinc     15120 Oct  5 22:38 start_atlas.sh
[2025-10-05 22:43:02] -rw-r--r--. 2 boinc boinc    565601 Oct  5 22:38 input.tar.gz
[2025-10-05 22:43:02] -rw-------. 1 boinc boinc    133120 Oct  5 22:43 result.tar.gz
22:43:03 (992508): run_atlas exited; CPU time 27.028363
22:43:03 (992508): called boinc_finish(0)

</stderr_txt>
]]>

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