Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:44:22 (1976654): wrapper (7.7.26015): starting
03:44:22 (1976654): wrapper: running run_atlas (--nthreads 4)
[2025-10-09 03:44:22] Arguments: --nthreads 4
[2025-10-09 03:44:22] Threads: 4
[2025-10-09 03:44:22] Checking for CVMFS
[2025-10-09 03:44:22] No cvmfs_config command found, will try listing directly
[2025-10-09 03:44:22] CVMFS is ok
[2025-10-09 03:44:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 03:44:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-09 03:44:22] Further information can be found at the LHC@home message board.
[2025-10-09 03:44:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 03:44:22] Checking for apptainer binary...
[2025-10-09 03:44:22] which: no apptainer in ((null))
[2025-10-09 03:44:22] apptainer is not installed, using version from CVMFS
[2025-10-09 03:44:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 03:44:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-09 03:44:22] apptainer works
[2025-10-09 03:44:22] Set ATHENA_PROC_NUMBER=4
[2025-10-09 03:44:22] Set ATHENA_CORE_NUMBER=4
[2025-10-09 03:44:22] Starting ATLAS job with PandaID=6832199551
[2025-10-09 03:44:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 06:43:00]  *** The last 200 lines of the pilot log: ***
[2025-10-09 06:43:00] 2025-10-09 04:24:15,909 | INFO     | fitting pss+swap vs Time
[2025-10-09 06:43:00] 2025-10-09 04:24:15,909 | INFO     | sum of square deviations: 1199940638.0
[2025-10-09 06:43:00] 2025-10-09 04:24:15,910 | INFO     | sum of deviations: 7598013356.0
[2025-10-09 06:43:00] 2025-10-09 04:24:15,910 | INFO     | mean x: 1759979055.0
[2025-10-09 06:43:00] 2025-10-09 04:24:15,910 | INFO     | mean y: 2288469.3184713377
[2025-10-09 06:43:00] 2025-10-09 04:24:15,910 | INFO     | -- intersect: -11141883119.418285
[2025-10-09 06:43:00] 2025-10-09 04:24:15,910 | INFO     | intersect: -11141883119.418285
[2025-10-09 06:43:00] 2025-10-09 04:24:15,911 | INFO     | chi2: 2.1693980409925073
[2025-10-09 06:43:00] 2025-10-09 04:24:15,911 | INFO     | sum of square deviations: 1088905998.0
[2025-10-09 06:43:00] 2025-10-09 04:24:15,912 | INFO     | sum of deviations: 17305995941.5
[2025-10-09 06:43:00] 2025-10-09 04:24:15,912 | INFO     | mean x: 1759978902.5
[2025-10-09 06:43:00] 2025-10-09 04:24:15,912 | INFO     | mean y: 2301442.7828947366
[2025-10-09 06:43:00] 2025-10-09 04:24:15,912 | INFO     | -- intersect: -27969064129.390785
[2025-10-09 06:43:00] 2025-10-09 04:24:15,912 | INFO     | intersect: -27969064129.390785
[2025-10-09 06:43:00] 2025-10-09 04:24:15,913 | INFO     | chi2: 1.3062486740975339
[2025-10-09 06:43:00] 2025-10-09 04:24:15,913 | INFO     | current chi2=1.3062486740975339 (change=39.787505593029834 %)
[2025-10-09 06:43:00] 2025-10-09 04:24:15,913 | INFO     | sum of square deviations: 984941258.0
[2025-10-09 06:43:00] 2025-10-09 04:24:15,914 | INFO     | sum of deviations: 16664511126.999998
[2025-10-09 06:43:00] 2025-10-09 04:24:15,914 | INFO     | mean x: 1759978750.0
[2025-10-09 06:43:00] 2025-10-09 04:24:15,914 | INFO     | mean y: 2300501.4217687077
[2025-10-09 06:43:00] 2025-10-09 04:24:15,914 | INFO     | -- intersect: -29775298136.504868
[2025-10-09 06:43:00] 2025-10-09 04:24:15,914 | INFO     | intersect: -29775298136.504868
[2025-10-09 06:43:00] 2025-10-09 04:24:15,915 | INFO     | chi2: 1.3075229246390587
[2025-10-09 06:43:00] 2025-10-09 04:24:15,915 | INFO     | current chi2=1.3075229246390587 (change=-0.09755037970891847 %)
[2025-10-09 06:43:00] 2025-10-09 04:24:15,915 | INFO     | right removable region: 146
[2025-10-09 06:43:00] 2025-10-09 04:24:15,915 | INFO     | sum of square deviations: 1088905998.0
[2025-10-09 06:43:00] 2025-10-09 04:24:15,916 | INFO     | sum of deviations: -11828452690.5
[2025-10-09 06:43:00] 2025-10-09 04:24:15,916 | INFO     | mean x: 1759979207.5
[2025-10-09 06:43:00] 2025-10-09 04:24:15,916 | INFO     | mean y: 2314714.3486842103
[2025-10-09 06:43:00] 2025-10-09 04:24:15,916 | INFO     | -- intersect: 19120430355.56442
[2025-10-09 06:43:00] 2025-10-09 04:24:15,916 | INFO     | intersect: 19120430355.56442
[2025-10-09 06:43:00] 2025-10-09 04:24:15,917 | INFO     | chi2: 0.8991352755094114
[2025-10-09 06:43:00] 2025-10-09 04:24:15,917 | INFO     | current chi2=0.8991352755094114 (change=58.55369745341643 %)
[2025-10-09 06:43:00] 2025-10-09 04:24:15,917 | INFO     | sum of square deviations: 984941258.0
[2025-10-09 06:43:00] 2025-10-09 04:24:15,918 | INFO     | sum of deviations: -10653774501.0
[2025-10-09 06:43:00] 2025-10-09 04:24:15,918 | INFO     | mean x: 1759979360.0
[2025-10-09 06:43:00] 2025-10-09 04:24:15,918 | INFO     | mean y: 2312988.9455782315
[2025-10-09 06:43:00] 2025-10-09 04:24:15,918 | INFO     | -- intersect: 19039410963.629364
[2025-10-09 06:43:00] 2025-10-09 04:24:15,918 | INFO     | intersect: 19039410963.629364
[2025-10-09 06:43:00] 2025-10-09 04:24:15,919 | INFO     | chi2: 0.898962319221073
[2025-10-09 06:43:00] 2025-10-09 04:24:15,919 | INFO     | current chi2=0.898962319221073 (change=0.019235847268974794 %)
[2025-10-09 06:43:00] 2025-10-09 04:24:15,919 | INFO     | left removable region: 20
[2025-10-09 06:43:00] 2025-10-09 04:24:15,919 | INFO     | sum of square deviations: 620244187.5
[2025-10-09 06:43:00] 2025-10-09 04:24:15,920 | INFO     | sum of deviations: 948583062.0000001
[2025-10-09 06:43:00] 2025-10-09 04:24:15,920 | INFO     | mean x: 1759979329.5
[2025-10-09 06:43:00] 2025-10-09 04:24:15,920 | INFO     | mean y: 2323876.619047619
[2025-10-09 06:43:00] 2025-10-09 04:24:15,920 | INFO     | -- intersect: -2689336303.483514
[2025-10-09 06:43:00] 2025-10-09 04:24:15,920 | INFO     | intersect: -2689336303.483514
[2025-10-09 06:43:00] 2025-10-09 04:24:15,920 | INFO     | chi2: 0.002828832059842326
[2025-10-09 06:43:00] 2025-10-09 04:24:15,921 | INFO     | -- intersect: -2689336303.483514
[2025-10-09 06:43:00] 2025-10-09 04:24:15,921 | INFO     | current memory leak: 1.53 B/s (using 126 data points, chi2=0.00)
[2025-10-09 06:43:00] 2025-10-09 04:24:15,921 | INFO     | could have reported an average CPU frequency of 2574 MHz (9 samples)
[2025-10-09 06:43:00] 2025-10-09 04:24:15,921 | INFO     | ..............................
[2025-10-09 06:43:00] 2025-10-09 04:24:15,921 | INFO     | . Timing measurements:
[2025-10-09 06:43:00] 2025-10-09 04:24:15,922 | INFO     | . get job = 0 s
[2025-10-09 06:43:00] 2025-10-09 04:24:15,922 | INFO     | . initial setup = 1 s
[2025-10-09 06:43:00] 2025-10-09 04:24:15,922 | INFO     | . payload setup = 5 s
[2025-10-09 06:43:00] 2025-10-09 04:24:15,922 | INFO     | . stage-in = 0 s
[2025-10-09 06:43:00] 2025-10-09 04:24:15,922 | INFO     | . payload execution = 9548 s
[2025-10-09 06:43:00] 2025-10-09 04:24:15,922 | INFO     | . stage-out = 0 s
[2025-10-09 06:43:00] 2025-10-09 04:24:15,922 | INFO     | . log creation = 0 s
[2025-10-09 06:43:00] 2025-10-09 04:24:15,922 | INFO     | ..............................
[2025-10-09 06:43:00] 2025-10-09 04:24:16,032 | INFO     | 
[2025-10-09 06:43:00] 2025-10-09 04:24:16,032 | INFO     | job summary report
[2025-10-09 06:43:00] 2025-10-09 04:24:16,032 | INFO     | --------------------------------------------------
[2025-10-09 06:43:00] 2025-10-09 04:24:16,032 | INFO     | PanDA job id: 6832199551
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | task id: 46376905
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | errors: (none)
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | pilot state: finished 
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | transexitcode: 0
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | exeerrorcode: 0
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | exeerrordiag: 
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | exitcode: 0
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | exitmsg: OK
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | cpuconsumptiontime: 36635 s
[2025-10-09 06:43:00] 2025-10-09 04:24:16,033 | INFO     | nevents: 400
[2025-10-09 06:43:00] 2025-10-09 04:24:16,034 | INFO     | neventsw: 0
[2025-10-09 06:43:00] 2025-10-09 04:24:16,034 | INFO     | pid: 2015008
[2025-10-09 06:43:00] 2025-10-09 04:24:16,034 | INFO     | pgrp: 2015008
[2025-10-09 06:43:00] 2025-10-09 04:24:16,034 | INFO     | corecount: 4
[2025-10-09 06:43:00] 2025-10-09 04:24:16,034 | INFO     | event service: False
[2025-10-09 06:43:00] 2025-10-09 04:24:16,034 | INFO     | sizes: {0: 2348605, 1: 2348804, 5: 2349066, 11: 2349122, 9557: 2377615, 9559: 2386819, 9568: 2387021}
[2025-10-09 06:43:00] 2025-10-09 04:24:16,034 | INFO     | --------------------------------------------------
[2025-10-09 06:43:00] 2025-10-09 04:24:16,034 | INFO     | 
[2025-10-09 06:43:00] 2025-10-09 04:24:16,034 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-10-09 06:43:00] 2025-10-09 04:24:16,057 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,057 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,058 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,058 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 06:43:00] 2025-10-09 04:24:16,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 06:43:00] 2025-10-09 04:24:16,060 | INFO     | job 6832199551 has completed (purged errors)
[2025-10-09 06:43:00] 2025-10-09 04:24:16,060 | INFO     | overall cleanup function is called
[2025-10-09 06:43:00] 2025-10-09 04:24:17,068 | INFO     | --- collectZombieJob: --- 10, [2015008]
[2025-10-09 06:43:00] 2025-10-09 04:24:17,068 | INFO     | zombie collector waiting for pid 2015008
[2025-10-09 06:43:00] 2025-10-09 04:24:17,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 06:43:00] 2025-10-09 04:24:17,068 | INFO     | collected zombie processes
[2025-10-09 06:43:00] 2025-10-09 04:24:17,068 | INFO     | will attempt to kill all subprocesses of pid=2015008
[2025-10-09 06:43:00] 2025-10-09 04:24:17,486 | INFO     | process IDs to be killed: [2015008] (in reverse order)
[2025-10-09 06:43:00] 2025-10-09 04:24:17,633 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 06:43:00] 2025-10-09 04:24:17,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 06:43:00] 2025-10-09 04:24:17,645 | INFO     | did not find any defunct processes belonging to 2015008
[2025-10-09 06:43:00] 2025-10-09 04:24:17,656 | INFO     | did not find any defunct processes belonging to 2015008
[2025-10-09 06:43:00] 2025-10-09 04:24:17,657 | INFO     | ready for new job
[2025-10-09 06:43:00] 2025-10-09 04:24:17,657 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 06:43:00] 2025-10-09 04:24:17,659 | INFO     | ***************************************
[2025-10-09 06:43:00] 2025-10-09 04:24:17,660 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 06:43:00] 2025-10-09 04:24:17,660 | INFO     | ***************************************
[2025-10-09 06:43:00] 2025-10-09 04:24:17,660 | INFO     | 
[2025-10-09 06:43:00] 2025-10-09 04:24:17,664 | INFO     | architecture information:
[2025-10-09 06:43:00] 2025-10-09 04:24:17,664 | INFO     | executing command: cat /etc/os-release
[2025-10-09 06:43:00] 2025-10-09 04:24:17,682 | INFO     | cat /etc/os-release:
[2025-10-09 06:43:00] NAME="CentOS Linux"
[2025-10-09 06:43:00] VERSION="7 (Core)"
[2025-10-09 06:43:00] ID="centos"
[2025-10-09 06:43:00] ID_LIKE="rhel fedora"
[2025-10-09 06:43:00] VERSION_ID="7"
[2025-10-09 06:43:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 06:43:00] ANSI_COLOR="0;31"
[2025-10-09 06:43:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 06:43:00] HOME_URL="https://www.centos.org/"
[2025-10-09 06:43:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 06:43:00] 
[2025-10-09 06:43:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 06:43:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 06:43:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 06:43:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 06:43:00] 
[2025-10-09 06:43:00] 2025-10-09 04:24:17,682 | INFO     | ***************************************
[2025-10-09 06:43:00] 2025-10-09 04:24:18,185 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-10-09 06:43:00] 2025-10-09 04:24:18,203 | INFO     | sufficient remaining disk space (683942084608 B)
[2025-10-09 06:43:00] 2025-10-09 04:24:18,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 06:43:00] 2025-10-09 04:24:18,204 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 06:43:00] 2025-10-09 04:24:18,204 | INFO     | update_server=False
[2025-10-09 06:43:00] 2025-10-09 04:24:18,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 06:43:00] 2025-10-09 04:24:18,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 06:43:00] 2025-10-09 04:24:18,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 06:43:00] 2025-10-09 04:24:18,345 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 06:43:00] 2025-10-09 04:24:18,345 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 06:43:00] 2025-10-09 04:24:18,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 06:43:00] 2025-10-09 04:24:18,345 | INFO     | will abort loop
[2025-10-09 06:43:00] 2025-10-09 04:24:18,474 | INFO     | all job control threads have been joined
[2025-10-09 06:43:00] 2025-10-09 04:24:18,654 | INFO     | all payload control threads have been joined
[2025-10-09 06:43:00] 2025-10-09 04:24:18,793 | INFO     | all data control threads have been joined
[2025-10-09 06:43:00] 2025-10-09 04:24:19,209 | INFO     | [job] retrieve thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:19,344 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:19,350 | INFO     | [job] job monitor thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:19,479 | INFO     | [job] control thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:19,584 | INFO     | [job] validate thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:19,603 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:19,640 | INFO     | [payload] failed_post thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:19,659 | INFO     | [payload] control thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:19,796 | INFO     | [data] copytool_in thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:19,798 | INFO     | [data] control thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:20,100 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:20,210 | INFO     | [data] copytool_out thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:20,724 | INFO     | [payload] validate_post thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:21,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 06:43:00] 2025-10-09 04:24:22,043 | INFO     | [job] queue monitor thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:22,210 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:29,105 | INFO     | job.realtimelogging is not enabled
[2025-10-09 06:43:00] 2025-10-09 04:24:30,110 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 06:43:00] 2025-10-09 04:24:46,777 | INFO     | [monitor] cgroup control has ended
[2025-10-09 06:43:00] 2025-10-09 04:24:47,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22521817880384)>', '<ExcThread(monitor, started 22521579534080)>']
[2025-10-09 06:43:00] 2025-10-09 04:24:47,664 | INFO     | PID=1984696 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 06:43:00] 2025-10-09 04:24:47,664 | INFO     | .. there are 10 such processes running
[2025-10-09 06:43:00] 2025-10-09 04:24:47,664 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 06:43:00] 2025-10-09 04:24:47,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 06:43:00] 2025-10-09 04:24:47,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 06:43:00] 2025-10-09 04:24:47,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 06:43:00] 2025-10-09 04:24:47,664 | INFO     | [monitor] control thread has ended
[2025-10-09 06:43:00] 2025-10-09 04:24:52,431 | INFO     | all workflow threads have been joined
[2025-10-09 06:43:00] 2025-10-09 04:24:52,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 06:43:00] 2025-10-09 04:24:52,432 | INFO     | traces error code: 0
[2025-10-09 06:43:00] 2025-10-09 04:24:52,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 06:43:00] 2025-10-09 04:24:52,584 [wrapper] ==== pilot stdout END ====
[2025-10-09 06:43:00] 2025-10-09 04:24:52,587 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 06:43:00] 2025-10-09 04:24:52,590 [wrapper] pilotpid: 1984696
[2025-10-09 06:43:00] 2025-10-09 04:24:52,593 [wrapper] Pilot exit status: 0
[2025-10-09 06:43:00] 2025-10-09 04:24:52,605 [wrapper] pandaids: 6832199551
[2025-10-09 06:43:00] 2025-10-09 04:24:52,683 [wrapper] cleanup supervisor_pilot 2348073 1984697
[2025-10-09 06:43:00] 2025-10-09 04:24:52,687 [wrapper] Test setup, not cleaning
[2025-10-09 06:43:00] 2025-10-09 04:24:52,690 [wrapper] apfmon messages muted
[2025-10-09 06:43:00] 2025-10-09 04:24:52,692 [wrapper] ==== wrapper stdout END ====
[2025-10-09 06:43:00] 2025-10-09 04:24:52,695 [wrapper] ==== wrapper stderr END ====
[2025-10-09 06:43:00]  *** Error codes and diagnostics ***
[2025-10-09 06:43:00]     "exeErrorCode": 0,
[2025-10-09 06:43:00]     "exeErrorDiag": "",
[2025-10-09 06:43:00]     "pilotErrorCode": 0,
[2025-10-09 06:43:00]     "pilotErrorDiag": "",
[2025-10-09 06:43:00]  *** Listing of results directory ***
[2025-10-09 06:43:00] total 393328
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc    552446 Oct  6 02:25 pilot3.tar.gz
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc      5112 Oct  6 02:50 queuedata.json
[2025-10-09 06:43:00] -rwx------ 1 boinc boinc     36292 Oct  6 02:52 runpilot2-wrapper.sh
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc       100 Oct  9 03:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 06:43:00] -rwxr-xr-x 1 boinc boinc      7986 Oct  9 03:44 run_atlas
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc       105 Oct  9 03:44 job.xml
[2025-10-09 06:43:00] -rw-r--r-- 2 boinc boinc 217506121 Oct  9 03:44 EVNT.46376901._003745.pool.root.1
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc      6634 Oct  9 03:44 init_data.xml
[2025-10-09 06:43:00] -rw-r--r-- 2 boinc boinc     15120 Oct  9 03:44 start_atlas.sh
[2025-10-09 06:43:00] drwxrwx--x 2 boinc boinc      4096 Oct  9 03:44 shared
[2025-10-09 06:43:00] -rw-r--r-- 2 boinc boinc    565603 Oct  9 03:44 input.tar.gz
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc         0 Oct  9 03:44 boinc_lockfile
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc      2518 Oct  9 03:44 pandaJob.out
[2025-10-09 06:43:00] -rw------- 1 boinc boinc    979290 Oct  9 03:44 agis_schedconf.cvmfs.json
[2025-10-09 06:43:00] -rw------- 1 boinc boinc   1560401 Oct  9 03:44 agis_ddmendpoints.agis.ALL.json
[2025-10-09 06:43:00] drwx------ 4 boinc boinc      4096 Oct  9 03:44 pilot3
[2025-10-09 06:43:00] -rw------- 1 boinc boinc 177966476 Oct  9 06:23 HITS.46376905._101315.pool.root.1
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc       528 Oct  9 06:23 boinc_task_state.xml
[2025-10-09 06:43:00] -rw------- 1 boinc boinc      1032 Oct  9 06:24 memory_monitor_summary.json
[2025-10-09 06:43:00] -rw------- 1 boinc boinc    332141 Oct  9 06:24 log.46376905._101315.job.log.tgz.1
[2025-10-09 06:43:00] -rw------- 1 boinc boinc        95 Oct  9 06:24 pilot_heartbeat.json
[2025-10-09 06:43:00] -rw------- 1 boinc boinc      7823 Oct  9 06:24 heartbeat.json
[2025-10-09 06:43:00] -rw------- 1 boinc boinc      5092 Oct  9 06:24 pilotlog.txt
[2025-10-09 06:43:00] -rw------- 1 boinc boinc   1364760 Oct  9 06:24 log.46376905._101315.job.log.1
[2025-10-09 06:43:00] -rw------- 1 boinc boinc       357 Oct  9 06:24 output.list
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc       620 Oct  9 06:24 runtime_log
[2025-10-09 06:43:00] -rw------- 1 boinc boinc   1720320 Oct  9 06:24 result.tar.gz
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc      9069 Oct  9 06:24 runtime_log.err
[2025-10-09 06:43:00] -rw------- 1 boinc boinc       663 Oct  9 06:24 2QcMDmBeoP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp0RNDmyPL0gm.diag
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc        26 Oct  9 06:42 wrapper_checkpoint.txt
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc      8192 Oct  9 06:43 boinc_mmap_file
[2025-10-09 06:43:00] -rw-r--r-- 1 boinc boinc     20681 Oct  9 06:43 stderr.txt
[2025-10-09 06:43:00] HITS file was successfully produced:
[2025-10-09 06:43:00] -rw------- 1 boinc boinc 177966476 Oct  9 06:23 shared/HITS.pool.root.1
[2025-10-09 06:43:00]  *** Contents of shared directory: ***
[2025-10-09 06:43:00] total 388468
[2025-10-09 06:43:00] -rw-r--r-- 2 boinc boinc 217506121 Oct  9 03:44 ATLAS.root_0
[2025-10-09 06:43:00] -rw-r--r-- 2 boinc boinc     15120 Oct  9 03:44 start_atlas.sh
[2025-10-09 06:43:00] -rw-r--r-- 2 boinc boinc    565603 Oct  9 03:44 input.tar.gz
[2025-10-09 06:43:00] -rw------- 1 boinc boinc 177966476 Oct  9 06:23 HITS.pool.root.1
[2025-10-09 06:43:00] -rw------- 1 boinc boinc   1720320 Oct  9 06:24 result.tar.gz
06:43:02 (1976654): run_atlas exited; CPU time 36994.416749
06:43:02 (1976654): called boinc_finish(0)

</stderr_txt>
]]>

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